RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 NECTIN1Q15223 517 aa17.17■□□□□ 0.34
CALD1-207ENST00000430085 NLRP3Q96P20 1036 aa17.17■□□□□ 0.34
CALD1-207ENST00000430085 CIZ1Q9ULV3 898 aaPredicted RBP17.17■□□□□ 0.34
CALD1-207ENST00000430085 RNF113AO15541 343 aaKnown RBP17.16■□□□□ 0.34
CALD1-207ENST00000430085 TAF5LO75529 589 aa17.16■□□□□ 0.34
CALD1-207ENST00000430085 UQCRFS1P1P0C7P4 283 aa17.16■□□□□ 0.34
CALD1-207ENST00000430085 FGFR2P21802 821 aa17.16■□□□□ 0.34
CALD1-207ENST00000430085 SCARF1Q14162 830 aa17.16■□□□□ 0.34
CALD1-207ENST00000430085 C3orf67Q6ZVT6 689 aa17.16■□□□□ 0.34
CALD1-207ENST00000430085 PSDA5PKW4 1024 aaPredicted RBP17.15■□□□□ 0.34
CALD1-207ENST00000430085 SSFA2P28290 1259 aa17.15■□□□□ 0.34
CALD1-207ENST00000430085 DDIT3P35638 169 aa17.15■□□□□ 0.34
CALD1-207ENST00000430085 ZAP70P43403 619 aa17.15■□□□□ 0.34
CALD1-207ENST00000430085 CREB3L3Q68CJ9 461 aa17.15■□□□□ 0.34
CALD1-207ENST00000430085 CCDC102BQ68D86 513 aa17.15■□□□□ 0.34
CALD1-207ENST00000430085 KCNB2Q92953 911 aa17.15■□□□□ 0.34
CALD1-207ENST00000430085 SEC62Q99442 399 aaKnown RBP17.15■□□□□ 0.34
CALD1-207ENST00000430085 ARAP2Q8WZ64 1704 aa17.15■□□□□ 0.34
CALD1-207ENST00000430085 CARMIL3Q8ND23 1372 aa17.15■□□□□ 0.34
CALD1-207ENST00000430085 PNPLA7Q6ZV29 1317 aa17.15■□□□□ 0.34
CALD1-207ENST00000430085 CHGBP05060 677 aa17.15■□□□□ 0.34
CALD1-207ENST00000430085 ZFYP08048 801 aaPredicted RBP17.15■□□□□ 0.34
CALD1-207ENST00000430085 MCAMP43121 646 aa17.15■□□□□ 0.34
CALD1-207ENST00000430085 CHRNDQ07001 517 aa17.15■□□□□ 0.34
CALD1-207ENST00000430085 ZMYM1Q5SVZ6 1142 aa17.15■□□□□ 0.34
CALD1-207ENST00000430085 CCDC129Q6ZRS4 1044 aa17.15■□□□□ 0.34
CALD1-207ENST00000430085 CASZ1Q86V15 1759 aa17.15■□□□□ 0.34
CALD1-207ENST00000430085 CASTP20810 708 aaKnown RBP17.14■□□□□ 0.33
CALD1-207ENST00000430085 TTF1Q15361 905 aaPredicted RBP17.14■□□□□ 0.33
CALD1-207ENST00000430085 JAKMIP1Q96N16 626 aaKnown RBP17.14■□□□□ 0.33
CALD1-207ENST00000430085 PDGFDQ9GZP0 370 aaPredicted RBP17.14■□□□□ 0.33
CALD1-207ENST00000430085 HMG20BQ9P0W2 317 aa17.14■□□□□ 0.33
CALD1-207ENST00000430085 SLC27A2O14975 620 aa17.13■□□□□ 0.33
CALD1-207ENST00000430085 ARID4AP29374 1257 aaPredicted RBP17.13■□□□□ 0.33
CALD1-207ENST00000430085 PHKA1P46020 1223 aa17.13■□□□□ 0.33
CALD1-207ENST00000430085 PI16Q6UXB8 463 aa17.13■□□□□ 0.33
CALD1-207ENST00000430085 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.13■□□□□ 0.33
CALD1-207ENST00000430085 BSDC1Q9NW68 430 aaPredicted RBP17.13■□□□□ 0.33
CALD1-207ENST00000430085 NFIXQ14938 502 aa17.13■□□□□ 0.33
CALD1-207ENST00000430085 NOL8Q76FK4 1167 aaKnown RBP17.13■□□□□ 0.33
CALD1-207ENST00000430085 COL23A1Q86Y22 540 aaPredicted RBP17.13■□□□□ 0.33
CALD1-207ENST00000430085 TMX3Q96JJ7 454 aa17.13■□□□□ 0.33
CALD1-207ENST00000430085 TM6SF1Q9BZW5 370 aa17.13■□□□□ 0.33
CALD1-207ENST00000430085 U3KPZ7 1027 aaPredicted RBP17.13■□□□□ 0.33
CALD1-207ENST00000430085 FRAT2O75474 233 aaPredicted RBP17.12■□□□□ 0.33
CALD1-207ENST00000430085 PSMA5P28066 241 aa17.12■□□□□ 0.33
CALD1-207ENST00000430085 CWC22Q9HCG8 908 aaKnown RBP17.12■□□□□ 0.33
CALD1-207ENST00000430085 CYP46A1Q9Y6A2 500 aa17.12■□□□□ 0.33
CALD1-207ENST00000430085 WASHC4Q2M389 1173 aa17.11■□□□□ 0.33
CALD1-207ENST00000430085 SLFNL1Q499Z3 407 aa17.11■□□□□ 0.33
CALD1-207ENST00000430085 ZSCAN25Q6NSZ9 544 aa17.11■□□□□ 0.33
CALD1-207ENST00000430085 CCDC24Q8N4L8 307 aa17.11■□□□□ 0.33
CALD1-207ENST00000430085 CNBD1Q8NA66 436 aa17.11■□□□□ 0.33
CALD1-207ENST00000430085 MAST3O60307 1309 aa17.11■□□□□ 0.33
CALD1-207ENST00000430085 SNAP23O00161 211 aa17.11■□□□□ 0.33
CALD1-207ENST00000430085 ADCK5Q3MIX3 580 aa17.11■□□□□ 0.33
CALD1-207ENST00000430085 ZSWIM6Q9HCJ5 1215 aa17.11■□□□□ 0.33
CALD1-207ENST00000430085 COL4A1P02462 1669 aa17.11■□□□□ 0.33
CALD1-207ENST00000430085 AKAP11Q9UKA4 1901 aa17.1■□□□□ 0.33
CALD1-207ENST00000430085 CELF1Q92879 486 aaKnown RBP17.1■□□□□ 0.33
CALD1-207ENST00000430085 TTC14Q96N46 770 aa17.1■□□□□ 0.33
CALD1-207ENST00000430085 CYP2E1P05181 493 aaPredicted RBP17.09■□□□□ 0.33
CALD1-207ENST00000430085 GYS1P13807 737 aa17.09■□□□□ 0.33
CALD1-207ENST00000430085 RPS8P62241 208 aaKnown RBP17.09■□□□□ 0.33
CALD1-207ENST00000430085 KRT32Q14532 448 aa17.09■□□□□ 0.33
CALD1-207ENST00000430085 RUFY3Q7L099 469 aa17.09■□□□□ 0.33
CALD1-207ENST00000430085 SPATA5Q8NB90 893 aa17.09■□□□□ 0.33
CALD1-207ENST00000430085 FLAD1Q8NFF5 587 aa17.09■□□□□ 0.33
CALD1-207ENST00000430085 APPBP2Q92624 585 aa17.09■□□□□ 0.33
CALD1-207ENST00000430085 DSCC1Q9BVC3 393 aa17.09■□□□□ 0.33
CALD1-207ENST00000430085 PDRG1Q9NUG6 133 aa17.09■□□□□ 0.33
CALD1-207ENST00000430085 M0R2C6 588 aa17.09■□□□□ 0.33
CALD1-207ENST00000430085 AK2P54819 239 aa17.09■□□□□ 0.33
CALD1-207ENST00000430085 TSGA10IPQ3SY00 556 aa17.09■□□□□ 0.33
CALD1-207ENST00000430085 VPS53Q5VIR6 699 aa17.09■□□□□ 0.33
CALD1-207ENST00000430085 OSBP2Q969R2 916 aa17.09■□□□□ 0.33
CALD1-207ENST00000430085 MINPP1Q9UNW1 487 aa17.09■□□□□ 0.33
CALD1-207ENST00000430085 TAF1P21675 1872 aa17.09■□□□□ 0.33
CALD1-207ENST00000430085 RPAP1Q9BWH6 1393 aaPredicted RBP17.09■□□□□ 0.33
CALD1-207ENST00000430085 MYH7P12883 1935 aa17.08■□□□□ 0.33
CALD1-207ENST00000430085 IDH1O75874 414 aaKnown RBP17.08■□□□□ 0.33
CALD1-207ENST00000430085 CPA1P15085 419 aa17.08■□□□□ 0.33
CALD1-207ENST00000430085 UBE4AQ14139 1066 aa17.08■□□□□ 0.33
CALD1-207ENST00000430085 BCAMP50895 628 aa17.08■□□□□ 0.32
CALD1-207ENST00000430085 CUL4AQ13619 759 aa17.08■□□□□ 0.32
CALD1-207ENST00000430085 RASGRF1Q13972 1273 aa17.08■□□□□ 0.32
CALD1-207ENST00000430085 RAB3GAP1Q15042 981 aa17.08■□□□□ 0.32
CALD1-207ENST00000430085 SLC9C2Q5TAH2 1124 aa17.08■□□□□ 0.32
CALD1-207ENST00000430085 BLOC1S2Q6QNY1 142 aa17.08■□□□□ 0.32
CALD1-207ENST00000430085 ZGPATQ8N5A5 531 aaKnown RBP17.08■□□□□ 0.32
CALD1-207ENST00000430085 PIH1D3Q9NQM4 214 aaKnown RBP17.08■□□□□ 0.32
CALD1-207ENST00000430085 LIMCH1Q9UPQ0 1083 aa17.08■□□□□ 0.32
CALD1-207ENST00000430085 A0A1B0GUL6 1792 aa17.07■□□□□ 0.32
CALD1-207ENST00000430085 HSPD1P10809 573 aaKnown RBP17.07■□□□□ 0.32
CALD1-207ENST00000430085 ST5P78524 1137 aa17.07■□□□□ 0.32
CALD1-207ENST00000430085 INTS4Q96HW7 963 aaKnown RBP17.07■□□□□ 0.32
CALD1-207ENST00000430085 TNRC6CQ9HCJ0 1690 aaKnown RBP17.07■□□□□ 0.32
CALD1-207ENST00000430085 ADD2P35612 726 aa17.06■□□□□ 0.32
CALD1-207ENST00000430085 NUCB2P80303 420 aa17.06■□□□□ 0.32
CALD1-207ENST00000430085 CAVIN4Q5BKX8 364 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms