RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 MXD3Q9BW11 206 aa22.79■■□□□ 1.24
SSR4P1-202ENST00000429427 CREBZFQ9NS37 354 aa22.79■■□□□ 1.24
SSR4P1-202ENST00000429427 KIF16BQ96L93 1317 aa22.79■■□□□ 1.24
SSR4P1-202ENST00000429427 G3V3G9 751 aa22.78■■□□□ 1.24
SSR4P1-202ENST00000429427 TRAF5O00463 557 aa22.78■■□□□ 1.24
SSR4P1-202ENST00000429427 DCAF8Q5TAQ9 597 aa22.78■■□□□ 1.24
SSR4P1-202ENST00000429427 ARHGAP45Q92619 1136 aa22.78■■□□□ 1.24
SSR4P1-202ENST00000429427 COA1Q9GZY4 146 aa22.78■■□□□ 1.24
SSR4P1-202ENST00000429427 TRIM27P14373 513 aa22.77■■□□□ 1.24
SSR4P1-202ENST00000429427 TBC1D10BQ4KMP7 808 aaPredicted RBP22.77■■□□□ 1.24
SSR4P1-202ENST00000429427 TAF7LQ5H9L4 462 aa22.77■■□□□ 1.24
SSR4P1-202ENST00000429427 DACT2Q5SW24 774 aa22.77■■□□□ 1.24
SSR4P1-202ENST00000429427 C15orf52Q6ZUT6 534 aaKnown RBP22.77■■□□□ 1.24
SSR4P1-202ENST00000429427 KLHDC4Q8TBB5 520 aa22.77■■□□□ 1.24
SSR4P1-202ENST00000429427 RIPOR2Q9Y4F9 1068 aa22.77■■□□□ 1.24
SSR4P1-202ENST00000429427 USP17L3A6NCW0 530 aa22.76■■□□□ 1.23
SSR4P1-202ENST00000429427 USP17L4A6NCW7 530 aa22.76■■□□□ 1.23
SSR4P1-202ENST00000429427 H7C1D1 291 aa22.76■■□□□ 1.23
SSR4P1-202ENST00000429427 RFX5P48382 616 aaPredicted RBP22.76■■□□□ 1.23
SSR4P1-202ENST00000429427 USP17L1Q7RTZ2 530 aa22.76■■□□□ 1.23
SSR4P1-202ENST00000429427 CNNM1Q9NRU3 951 aa22.76■■□□□ 1.23
SSR4P1-202ENST00000429427 KCNJ4P48050 445 aa22.75■■□□□ 1.23
SSR4P1-202ENST00000429427 ZNF280AP59817 542 aaPredicted RBP22.75■■□□□ 1.23
SSR4P1-202ENST00000429427 LRRC24Q50LG9 513 aa22.75■■□□□ 1.23
SSR4P1-202ENST00000429427 INTS3Q68E01 1043 aaKnown RBP22.75■■□□□ 1.23
SSR4P1-202ENST00000429427 JMYQ8N9B5 988 aa22.75■■□□□ 1.23
SSR4P1-202ENST00000429427 AGBL3Q8NEM8 1001 aa22.75■■□□□ 1.23
SSR4P1-202ENST00000429427 MEIS3Q99687 375 aa22.75■■□□□ 1.23
SSR4P1-202ENST00000429427 GLIS2Q9BZE0 524 aaPredicted RBP22.75■■□□□ 1.23
SSR4P1-202ENST00000429427 ASTN2O75129 1339 aaPredicted RBP22.75■■□□□ 1.23
SSR4P1-202ENST00000429427 PLIN1O60240 522 aa22.74■■□□□ 1.23
SSR4P1-202ENST00000429427 DLK2Q6UY11 383 aa22.74■■□□□ 1.23
SSR4P1-202ENST00000429427 ZC3H15Q8WU90 426 aaKnown RBP22.74■■□□□ 1.23
SSR4P1-202ENST00000429427 TMEM88BA6NKF7 163 aa22.73■■□□□ 1.23
SSR4P1-202ENST00000429427 RBM26Q5T8P6 1007 aaKnown RBP22.73■■□□□ 1.23
SSR4P1-202ENST00000429427 CST9Q5W186 159 aa22.73■■□□□ 1.23
SSR4P1-202ENST00000429427 VGLL2Q8N8G2 317 aa22.73■■□□□ 1.23
SSR4P1-202ENST00000429427 CD209Q9NNX6 404 aa22.73■■□□□ 1.23
SSR4P1-202ENST00000429427 UBTFL1P0CB47 393 aaPredicted RBP22.72■■□□□ 1.23
SSR4P1-202ENST00000429427 KIF4BQ2VIQ3 1234 aa22.72■■□□□ 1.23
SSR4P1-202ENST00000429427 STRIP1Q5VSL9 837 aa22.72■■□□□ 1.23
SSR4P1-202ENST00000429427 ATF7IPQ6VMQ6 1270 aa22.72■■□□□ 1.23
SSR4P1-202ENST00000429427 FRAT1Q92837 279 aaPredicted RBP22.72■■□□□ 1.23
SSR4P1-202ENST00000429427 MKRN1Q9UHC7 482 aaKnown RBP22.71■■□□□ 1.23
SSR4P1-202ENST00000429427 LRRFIP2Q9Y608 721 aaKnown RBP22.71■■□□□ 1.23
SSR4P1-202ENST00000429427 CNTNAP1P78357 1384 aa22.71■■□□□ 1.23
SSR4P1-202ENST00000429427 USP17L8P0C7I0 530 aa22.7■■□□□ 1.22
SSR4P1-202ENST00000429427 IL1R1P14778 569 aa22.7■■□□□ 1.22
SSR4P1-202ENST00000429427 GTF2IP78347 998 aa22.7■■□□□ 1.22
SSR4P1-202ENST00000429427 PTPN12Q05209 780 aaKnown RBP22.7■■□□□ 1.22
SSR4P1-202ENST00000429427 CERS5Q8N5B7 392 aa22.7■■□□□ 1.22
SSR4P1-202ENST00000429427 MROH5Q6ZUA9 1318 aa22.69■■□□□ 1.22
SSR4P1-202ENST00000429427 TTLL5Q6EMB2 1281 aa22.69■■□□□ 1.22
SSR4P1-202ENST00000429427 FBXW7Q969H0 707 aa22.69■■□□□ 1.22
SSR4P1-202ENST00000429427 CLUAP1Q96AJ1 413 aa22.69■■□□□ 1.22
SSR4P1-202ENST00000429427 UBE4AQ14139 1066 aa22.68■■□□□ 1.22
SSR4P1-202ENST00000429427 USP48Q86UV5 1035 aa22.68■■□□□ 1.22
SSR4P1-202ENST00000429427 MYOZ2Q9NPC6 264 aa22.68■■□□□ 1.22
SSR4P1-202ENST00000429427 TRPM7Q96QT4 1865 aa22.68■■□□□ 1.22
SSR4P1-202ENST00000429427 ADM5C9JUS6 153 aa22.67■■□□□ 1.22
SSR4P1-202ENST00000429427 IPO8O15397 1037 aaKnown RBP22.67■■□□□ 1.22
SSR4P1-202ENST00000429427 GYG1P46976 350 aa22.67■■□□□ 1.22
SSR4P1-202ENST00000429427 CDC37L1Q7L3B6 337 aa22.67■■□□□ 1.22
SSR4P1-202ENST00000429427 ATG9AQ7Z3C6 839 aa22.67■■□□□ 1.22
SSR4P1-202ENST00000429427 ZNF804AQ7Z570 1209 aa22.67■■□□□ 1.22
SSR4P1-202ENST00000429427 FAM84BQ96KN1 310 aaPredicted RBP22.67■■□□□ 1.22
SSR4P1-202ENST00000429427 GGA3Q9NZ52 723 aa22.67■■□□□ 1.22
SSR4P1-202ENST00000429427 RASSF10A6NK89 507 aa22.66■■□□□ 1.22
SSR4P1-202ENST00000429427 SCARF1Q14162 830 aa22.66■■□□□ 1.22
SSR4P1-202ENST00000429427 METTL24Q5JXM2 366 aa22.66■■□□□ 1.22
SSR4P1-202ENST00000429427 JAG2Q9Y219 1238 aa22.66■■□□□ 1.22
SSR4P1-202ENST00000429427 MYO3BQ8WXR4 1341 aa22.65■■□□□ 1.22
SSR4P1-202ENST00000429427 EYA2O00167 538 aa22.65■■□□□ 1.22
SSR4P1-202ENST00000429427 PDE8BO95263 885 aa22.65■■□□□ 1.22
SSR4P1-202ENST00000429427 ZKSCAN2Q63HK3 967 aa22.65■■□□□ 1.22
SSR4P1-202ENST00000429427 KRT26Q7Z3Y9 468 aa22.65■■□□□ 1.22
SSR4P1-202ENST00000429427 TMEM57Q8N5G2 664 aa22.65■■□□□ 1.22
SSR4P1-202ENST00000429427 POLR2AP24928 1970 aaKnown RBP22.65■■□□□ 1.22
SSR4P1-202ENST00000429427 CELF2O95319 508 aaKnown RBP22.64■■□□□ 1.21
SSR4P1-202ENST00000429427 RLBP1P12271 317 aa22.64■■□□□ 1.21
SSR4P1-202ENST00000429427 FGFR2P21802 821 aa22.64■■□□□ 1.21
SSR4P1-202ENST00000429427 VEGFBP49765 207 aa22.64■■□□□ 1.21
SSR4P1-202ENST00000429427 NBPF9Q3BBW0 867 aa22.64■■□□□ 1.21
SSR4P1-202ENST00000429427 ANGEL2Q5VTE6 544 aaKnown RBP22.64■■□□□ 1.21
SSR4P1-202ENST00000429427 KIAA0825Q8IV33 1275 aa22.64■■□□□ 1.21
SSR4P1-202ENST00000429427 TDRD7Q8NHU6 1098 aaKnown RBP22.64■■□□□ 1.21
SSR4P1-202ENST00000429427 PA2G4Q9UQ80 394 aaKnown RBP22.64■■□□□ 1.21
SSR4P1-202ENST00000429427 FBXO33Q7Z6M2 555 aa22.63■■□□□ 1.21
SSR4P1-202ENST00000429427 ZBED3Q96IU2 234 aaPredicted RBP22.63■■□□□ 1.21
SSR4P1-202ENST00000429427 ABT1Q9ULW3 272 aaKnown RBP22.63■■□□□ 1.21
SSR4P1-202ENST00000429427 SCAF8Q9UPN6 1271 aaKnown RBP22.63■■□□□ 1.21
SSR4P1-202ENST00000429427 GNAI3P08754 354 aa22.62■■□□□ 1.21
SSR4P1-202ENST00000429427 HIBADHP31937 336 aaKnown RBP22.62■■□□□ 1.21
SSR4P1-202ENST00000429427 SIL1Q9H173 461 aa22.62■■□□□ 1.21
SSR4P1-202ENST00000429427 TLL2Q9Y6L7 1015 aa22.62■■□□□ 1.21
SSR4P1-202ENST00000429427 FAM205AQ6ZU69 1335 aa22.61■■□□□ 1.21
SSR4P1-202ENST00000429427 WNT10BO00744 389 aa22.61■■□□□ 1.21
SSR4P1-202ENST00000429427 SASH1O94885 1247 aa22.61■■□□□ 1.21
SSR4P1-202ENST00000429427 MTX1Q13505 466 aa22.61■■□□□ 1.21
SSR4P1-202ENST00000429427 DCPSQ96C86 337 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms