RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 RUFY2Q8WXA3 655 aa18.82■□□□□ 0.6
TVP23C-203ENST00000428082 RPS8P62241 208 aaKnown RBP18.81■□□□□ 0.6
TVP23C-203ENST00000428082 KIAA1211Q6ZU35 1233 aa18.81■□□□□ 0.6
TVP23C-203ENST00000428082 SGSM2O43147 1006 aa18.8■□□□□ 0.6
TVP23C-203ENST00000428082 SRGNP10124 158 aa18.8■□□□□ 0.6
TVP23C-203ENST00000428082 POLD1P28340 1107 aa18.8■□□□□ 0.6
TVP23C-203ENST00000428082 HOXA10P31260 410 aaPredicted RBP18.8■□□□□ 0.6
TVP23C-203ENST00000428082 C10orf71Q711Q0 1435 aa18.8■□□□□ 0.6
TVP23C-203ENST00000428082 RBM17Q96I25 401 aaKnown RBP18.8■□□□□ 0.6
TVP23C-203ENST00000428082 AK9Q5TCS8 1911 aa18.8■□□□□ 0.6
TVP23C-203ENST00000428082 GRAPQ13588 217 aa18.8■□□□□ 0.6
TVP23C-203ENST00000428082 GRAPLQ8TC17 118 aaPredicted RBP18.8■□□□□ 0.6
TVP23C-203ENST00000428082 EAF2Q96CJ1 260 aaPredicted RBP18.8■□□□□ 0.6
TVP23C-203ENST00000428082 TRIM44Q96DX7 344 aaPredicted RBP18.8■□□□□ 0.6
TVP23C-203ENST00000428082 SGIP1Q9BQI5 828 aa18.8■□□□□ 0.6
TVP23C-203ENST00000428082 BSDC1Q9NW68 430 aaPredicted RBP18.8■□□□□ 0.6
TVP23C-203ENST00000428082 CEP126Q9P2H0 1117 aa18.8■□□□□ 0.6
TVP23C-203ENST00000428082 RAD50Q92878 1312 aa18.8■□□□□ 0.6
TVP23C-203ENST00000428082 MBD3O95983 291 aa18.79■□□□□ 0.6
TVP23C-203ENST00000428082 METTL24Q5JXM2 366 aa18.79■□□□□ 0.6
TVP23C-203ENST00000428082 GAS2L3Q86XJ1 694 aa18.79■□□□□ 0.6
TVP23C-203ENST00000428082 PALD1Q9ULE6 856 aa18.79■□□□□ 0.6
TVP23C-203ENST00000428082 A0A1B0GUL6 1792 aa18.79■□□□□ 0.6
TVP23C-203ENST00000428082 CCDC173Q0VFZ6 552 aa18.78■□□□□ 0.6
TVP23C-203ENST00000428082 TNNI3KQ59H18 835 aa18.78■□□□□ 0.6
TVP23C-203ENST00000428082 AACSQ86V21 672 aa18.78■□□□□ 0.6
TVP23C-203ENST00000428082 HELBQ8NG08 1087 aaPredicted RBP18.78■□□□□ 0.6
TVP23C-203ENST00000428082 FPGT-TNNI3KV9GXZ4 949 aa18.78■□□□□ 0.6
TVP23C-203ENST00000428082 KIF13BQ9NQT8 1826 aa18.78■□□□□ 0.6
TVP23C-203ENST00000428082 BRD1O95696 1058 aa18.78■□□□□ 0.6
TVP23C-203ENST00000428082 NPR1P16066 1061 aa18.78■□□□□ 0.6
TVP23C-203ENST00000428082 C2CD5Q86YS7 1000 aa18.78■□□□□ 0.6
TVP23C-203ENST00000428082 VGLL2Q8N8G2 317 aa18.78■□□□□ 0.6
TVP23C-203ENST00000428082 CRAMP1Q96RY5 1269 aa18.78■□□□□ 0.6
TVP23C-203ENST00000428082 ZDHHC9Q9Y397 364 aa18.78■□□□□ 0.6
TVP23C-203ENST00000428082 MROH5Q6ZUA9 1318 aa18.78■□□□□ 0.6
TVP23C-203ENST00000428082 CHRNA5P30532 468 aa18.77■□□□□ 0.6
TVP23C-203ENST00000428082 PTGER2P43116 358 aa18.77■□□□□ 0.6
TVP23C-203ENST00000428082 CHRNDQ07001 517 aa18.77■□□□□ 0.6
TVP23C-203ENST00000428082 SLC51AQ86UW1 340 aa18.77■□□□□ 0.6
TVP23C-203ENST00000428082 CCDC8Q9H0W5 538 aaPredicted RBP18.77■□□□□ 0.6
TVP23C-203ENST00000428082 ECHDC1Q9NTX5 307 aa18.77■□□□□ 0.6
TVP23C-203ENST00000428082 CACNA1SQ13698 1873 aa18.77■□□□□ 0.59
TVP23C-203ENST00000428082 H0YIN7 160 aa18.76■□□□□ 0.59
TVP23C-203ENST00000428082 TAF5LO75529 589 aa18.76■□□□□ 0.59
TVP23C-203ENST00000428082 NCLP19338 710 aaKnown RBP18.76■□□□□ 0.59
TVP23C-203ENST00000428082 NASPP49321 788 aaPredicted RBP18.76■□□□□ 0.59
TVP23C-203ENST00000428082 PKP1Q13835 747 aa18.76■□□□□ 0.59
TVP23C-203ENST00000428082 MASTLQ96GX5 879 aa18.76■□□□□ 0.59
TVP23C-203ENST00000428082 TLR7Q9NYK1 1049 aaKnown RBP18.76■□□□□ 0.59
TVP23C-203ENST00000428082 MINPP1Q9UNW1 487 aa18.76■□□□□ 0.59
TVP23C-203ENST00000428082 HIP1O00291 1037 aa18.76■□□□□ 0.59
TVP23C-203ENST00000428082 PRPF40AO75400 957 aaKnown RBP18.76■□□□□ 0.59
TVP23C-203ENST00000428082 PDE8BO95263 885 aa18.76■□□□□ 0.59
TVP23C-203ENST00000428082 IFIT2P09913 472 aaKnown RBP18.76■□□□□ 0.59
TVP23C-203ENST00000428082 CLCN1P35523 988 aa18.76■□□□□ 0.59
TVP23C-203ENST00000428082 TIMM10P62072 90 aa18.76■□□□□ 0.59
TVP23C-203ENST00000428082 GPR108Q9NPR9 543 aa18.76■□□□□ 0.59
TVP23C-203ENST00000428082 RRAGDQ9NQL2 400 aaPredicted RBP18.76■□□□□ 0.59
TVP23C-203ENST00000428082 DIAPH3Q9NSV4 1193 aa18.76■□□□□ 0.59
TVP23C-203ENST00000428082 ZNF609O15014 1411 aa18.76■□□□□ 0.59
TVP23C-203ENST00000428082 ZNF622Q969S3 477 aaKnown RBP eCLIP18.75■□□□□ 0.592e-8■□□□□ 10.5
TVP23C-203ENST00000428082 WDR33Q9C0J8 1336 aaKnown RBP18.74■□□□□ 0.59
TVP23C-203ENST00000428082 A0A1B0GUL7 405 aa18.74■□□□□ 0.59
TVP23C-203ENST00000428082 ZSCAN23Q3MJ62 389 aa18.74■□□□□ 0.59
TVP23C-203ENST00000428082 CAVIN1Q6NZI2 390 aaKnown RBP18.74■□□□□ 0.59
TVP23C-203ENST00000428082 LSG1Q9H089 658 aaKnown RBP18.74■□□□□ 0.59
TVP23C-203ENST00000428082 SNAP23O00161 211 aa18.74■□□□□ 0.59
TVP23C-203ENST00000428082 BBOX1O75936 387 aa18.74■□□□□ 0.59
TVP23C-203ENST00000428082 EVI5LQ96CN4 794 aa18.74■□□□□ 0.59
TVP23C-203ENST00000428082 NEUROD6Q96NK8 337 aa18.74■□□□□ 0.59
TVP23C-203ENST00000428082 DBNLQ9UJU6 430 aaKnown RBP18.74■□□□□ 0.59
TVP23C-203ENST00000428082 AKAP2Q9Y2D5 859 aa18.74■□□□□ 0.59
TVP23C-203ENST00000428082 DLEC1Q9Y238 1755 aa18.74■□□□□ 0.59
TVP23C-203ENST00000428082 ALDH1B1P30837 517 aa18.73■□□□□ 0.59
TVP23C-203ENST00000428082 ATP2B3Q16720 1220 aa18.73■□□□□ 0.59
TVP23C-203ENST00000428082 PPP1R9BQ96SB3 815 aa18.73■□□□□ 0.59
TVP23C-203ENST00000428082 DBNDD2Q9BQY9 259 aa18.73■□□□□ 0.59
TVP23C-203ENST00000428082 KIAA1551Q9HCM1 1747 aa18.73■□□□□ 0.59
TVP23C-203ENST00000428082 WTIPA6NIX2 430 aaPredicted RBP18.72■□□□□ 0.59
TVP23C-203ENST00000428082 STYK1Q6J9G0 422 aa18.72■□□□□ 0.59
TVP23C-203ENST00000428082 SYAP1Q96A49 352 aaPredicted RBP18.72■□□□□ 0.59
TVP23C-203ENST00000428082 PPEF1O14829 653 aaPredicted RBP18.72■□□□□ 0.59
TVP23C-203ENST00000428082 MAP4K4O95819 1239 aaPredicted RBP18.72■□□□□ 0.59
TVP23C-203ENST00000428082 FGFR2P21802 821 aa18.72■□□□□ 0.59
TVP23C-203ENST00000428082 PUM3Q15397 648 aaKnown RBP18.72■□□□□ 0.59
TVP23C-203ENST00000428082 SPON1Q9HCB6 807 aa18.72■□□□□ 0.59
TVP23C-203ENST00000428082 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.72■□□□□ 0.59
TVP23C-203ENST00000428082 SNX14Q9Y5W7 946 aa18.72■□□□□ 0.59
TVP23C-203ENST00000428082 SLX4Q8IY92 1834 aa18.72■□□□□ 0.59
TVP23C-203ENST00000428082 A0A0G2JLW4 131 aa18.71■□□□□ 0.59
TVP23C-203ENST00000428082 UPF3BQ9BZI7 483 aaKnown RBP18.71■□□□□ 0.59
TVP23C-203ENST00000428082 PPP1R1BQ9UD71 204 aaPredicted RBP18.71■□□□□ 0.59
TVP23C-203ENST00000428082 LRRC37AA6NMS7 1700 aa18.71■□□□□ 0.59
TVP23C-203ENST00000428082 ESPNB1AK53 854 aa18.7■□□□□ 0.58
TVP23C-203ENST00000428082 DPEP1P16444 411 aa18.7■□□□□ 0.58
TVP23C-203ENST00000428082 ADORA1P30542 326 aa18.7■□□□□ 0.58
TVP23C-203ENST00000428082 CWC27Q6UX04 472 aaKnown RBP18.7■□□□□ 0.58
TVP23C-203ENST00000428082 LIMCH1Q9UPQ0 1083 aa18.7■□□□□ 0.58
TVP23C-203ENST00000428082 ARAP2Q8WZ64 1704 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms