RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 PDE8BO95263 885 aa29.24■■■□□ 2.27
PDGFA-205ENST00000426681 TOMM70O94826 608 aa29.23■■■□□ 2.27
PDGFA-205ENST00000426681 SCNN1DP51172 638 aa29.23■■■□□ 2.27
PDGFA-205ENST00000426681 ATP8B2P98198 1209 aa29.23■■■□□ 2.27
PDGFA-205ENST00000426681 C20orf194Q5TEA3 1177 aa29.23■■■□□ 2.27
PDGFA-205ENST00000426681 HACL1Q9UJ83 578 aa29.23■■■□□ 2.27
PDGFA-205ENST00000426681 PA2G4Q9UQ80 394 aaKnown RBP29.23■■■□□ 2.27
PDGFA-205ENST00000426681 PNMA6EA0A0J9YXQ4 647 aa29.22■■■□□ 2.27
PDGFA-205ENST00000426681 PSMD14O00487 310 aa29.22■■■□□ 2.27
PDGFA-205ENST00000426681 C16orf71Q8IYS4 520 aaPredicted RBP29.22■■■□□ 2.27
PDGFA-205ENST00000426681 SIL1Q9H173 461 aa29.22■■■□□ 2.27
PDGFA-205ENST00000426681 CHMP4BQ9H444 224 aaKnown RBP29.22■■■□□ 2.27
PDGFA-205ENST00000426681 TAF1DQ9H5J8 278 aaPredicted RBP29.22■■■□□ 2.27
PDGFA-205ENST00000426681 C1orf115Q9H7X2 142 aa29.22■■■□□ 2.27
PDGFA-205ENST00000426681 PSME4Q14997 1843 aa29.22■■■□□ 2.27
PDGFA-205ENST00000426681 VIL1P09327 827 aaKnown RBP29.21■■■□□ 2.27
PDGFA-205ENST00000426681 IL15P40933 162 aaPredicted RBP29.21■■■□□ 2.27
PDGFA-205ENST00000426681 GMPSP49915 693 aaPredicted RBP29.2■■■□□ 2.26
PDGFA-205ENST00000426681 POLA2Q14181 598 aa29.2■■■□□ 2.26
PDGFA-205ENST00000426681 SSH3Q8TE77 659 aa29.2■■■□□ 2.26
PDGFA-205ENST00000426681 ZBTB40Q9NUA8 1239 aa29.2■■■□□ 2.26
PDGFA-205ENST00000426681 GPRC5DQ9NZD1 345 aa29.2■■■□□ 2.26
PDGFA-205ENST00000426681 LMOD1P29536 600 aaPredicted RBP29.19■■■□□ 2.26
PDGFA-205ENST00000426681 ZNF804AQ7Z570 1209 aa29.19■■■□□ 2.26
PDGFA-205ENST00000426681 RBM46Q8TBY0 533 aaKnown RBP29.19■■■□□ 2.26
PDGFA-205ENST00000426681 DPF2Q92785 391 aa29.19■■■□□ 2.26
PDGFA-205ENST00000426681 CD209Q9NNX6 404 aa29.19■■■□□ 2.26
PDGFA-205ENST00000426681 USP17L3A6NCW0 530 aa29.18■■■□□ 2.26
PDGFA-205ENST00000426681 USP17L4A6NCW7 530 aa29.18■■■□□ 2.26
PDGFA-205ENST00000426681 FGFR2P21802 821 aa29.18■■■□□ 2.26
PDGFA-205ENST00000426681 RPS12P25398 132 aaKnown RBP29.18■■■□□ 2.26
PDGFA-205ENST00000426681 EPHX2P34913 555 aa29.18■■■□□ 2.26
PDGFA-205ENST00000426681 RRP1P56182 461 aaKnown RBP29.18■■■□□ 2.26
PDGFA-205ENST00000426681 PUM3Q15397 648 aaKnown RBP29.18■■■□□ 2.26
PDGFA-205ENST00000426681 USP17L1Q7RTZ2 530 aa29.18■■■□□ 2.26
PDGFA-205ENST00000426681 CEP126Q9P2H0 1117 aa29.18■■■□□ 2.26
PDGFA-205ENST00000426681 ZNF609O15014 1411 aa29.18■■■□□ 2.26
PDGFA-205ENST00000426681 C1QTNF8P60827 252 aa29.17■■■□□ 2.26
PDGFA-205ENST00000426681 IL1R1P14778 569 aa29.16■■■□□ 2.26
PDGFA-205ENST00000426681 EPS15P42566 896 aa29.16■■■□□ 2.26
PDGFA-205ENST00000426681 CEP85Q6P2H3 762 aa29.16■■■□□ 2.26
PDGFA-205ENST00000426681 FAM84BQ96KN1 310 aaPredicted RBP29.16■■■□□ 2.26
PDGFA-205ENST00000426681 ZBTB12Q9Y330 459 aaPredicted RBP29.16■■■□□ 2.26
PDGFA-205ENST00000426681 STRIP1Q5VSL9 837 aa29.15■■■□□ 2.26
PDGFA-205ENST00000426681 RSBN1LQ6PCB5 846 aaPredicted RBP29.15■■■□□ 2.26
PDGFA-205ENST00000426681 PNMA8AQ86V59 439 aaPredicted RBP29.15■■■□□ 2.26
PDGFA-205ENST00000426681 HIBADHP31937 336 aaKnown RBP29.14■■■□□ 2.26
PDGFA-205ENST00000426681 AGBL3Q8NEM8 1001 aa29.14■■■□□ 2.26
PDGFA-205ENST00000426681 LPIN2Q92539 896 aa29.14■■■□□ 2.26
PDGFA-205ENST00000426681 ZNF646O15015 1829 aaPredicted RBP29.13■■■□□ 2.25
PDGFA-205ENST00000426681 IFIT1P09914 478 aaKnown RBP29.13■■■□□ 2.25
PDGFA-205ENST00000426681 GYG1P46976 350 aa29.13■■■□□ 2.25
PDGFA-205ENST00000426681 DACT2Q5SW24 774 aa29.13■■■□□ 2.25
PDGFA-205ENST00000426681 FBXO33Q7Z6M2 555 aa29.13■■■□□ 2.25
PDGFA-205ENST00000426681 GMLQ99445 158 aa29.13■■■□□ 2.25
PDGFA-205ENST00000426681 CNOT7Q9UIV1 285 aaKnown RBP29.13■■■□□ 2.25
PDGFA-205ENST00000426681 FSTL1Q12841 308 aa29.12■■■□□ 2.25
PDGFA-205ENST00000426681 TTLL5Q6EMB2 1281 aa29.12■■■□□ 2.25
PDGFA-205ENST00000426681 SMC1BQ8NDV3 1235 aa29.12■■■□□ 2.25
PDGFA-205ENST00000426681 TDRD7Q8NHU6 1098 aaKnown RBP29.12■■■□□ 2.25
PDGFA-205ENST00000426681 ADARB2Q9NS39 739 aaKnown RBP29.12■■■□□ 2.25
PDGFA-205ENST00000426681 SLC5A1P13866 664 aa29.11■■■□□ 2.25
PDGFA-205ENST00000426681 G3BP1Q13283 466 aaKnown RBP eCLIP29.11■■■□□ 2.25
PDGFA-205ENST00000426681 CAVIN4Q5BKX8 364 aa29.11■■■□□ 2.25
PDGFA-205ENST00000426681 USP50Q70EL3 339 aaPredicted RBP29.11■■■□□ 2.25
PDGFA-205ENST00000426681 LDHDQ86WU2 507 aa29.11■■■□□ 2.25
PDGFA-205ENST00000426681 RPAP2Q8IXW5 612 aaPredicted RBP29.11■■■□□ 2.25
PDGFA-205ENST00000426681 NOP58Q9Y2X3 529 aaKnown RBP29.11■■■□□ 2.25
PDGFA-205ENST00000426681 H7C1D1 291 aa29.1■■■□□ 2.25
PDGFA-205ENST00000426681 SASH1O94885 1247 aa29.1■■■□□ 2.25
PDGFA-205ENST00000426681 ATP2B3Q16720 1220 aa29.1■■■□□ 2.25
PDGFA-205ENST00000426681 MICALL2Q8IY33 904 aa29.1■■■□□ 2.25
PDGFA-205ENST00000426681 ADAMTSL1Q8N6G6 1762 aa29.1■■■□□ 2.25
PDGFA-205ENST00000426681 POTEIP0CG38 1075 aa29.09■■■□□ 2.25
PDGFA-205ENST00000426681 POTEJP0CG39 1038 aa29.09■■■□□ 2.25
PDGFA-205ENST00000426681 GTF2IP78347 998 aa29.09■■■□□ 2.25
PDGFA-205ENST00000426681 EAPPQ56P03 285 aaPredicted RBP29.09■■■□□ 2.25
PDGFA-205ENST00000426681 MYO3BQ8WXR4 1341 aa29.09■■■□□ 2.25
PDGFA-205ENST00000426681 TFCP2Q12800 502 aa29.08■■■□□ 2.25
PDGFA-205ENST00000426681 VPS37DQ86XT2 251 aa29.08■■■□□ 2.25
PDGFA-205ENST00000426681 AKAP2Q9Y2D5 859 aa29.08■■■□□ 2.25
PDGFA-205ENST00000426681 SHTN1A0MZ66 631 aa29.07■■■□□ 2.24
PDGFA-205ENST00000426681 SURF6O75683 361 aaKnown RBP29.07■■■□□ 2.24
PDGFA-205ENST00000426681 CHADLQ6NUI6 762 aa29.07■■■□□ 2.24
PDGFA-205ENST00000426681 FAM205AQ6ZU69 1335 aa29.07■■■□□ 2.24
PDGFA-205ENST00000426681 BCAMP50895 628 aa29.06■■■□□ 2.24
PDGFA-205ENST00000426681 ZNF280AP59817 542 aaPredicted RBP29.06■■■□□ 2.24
PDGFA-205ENST00000426681 FKBP1AP62942 108 aaKnown RBP29.06■■■□□ 2.24
PDGFA-205ENST00000426681 FBXW7Q969H0 707 aa29.06■■■□□ 2.24
PDGFA-205ENST00000426681 USP17L8P0C7I0 530 aa29.05■■■□□ 2.24
PDGFA-205ENST00000426681 MMP14P50281 582 aa29.05■■■□□ 2.24
PDGFA-205ENST00000426681 SIRT2Q8IXJ6 389 aa29.05■■■□□ 2.24
PDGFA-205ENST00000426681 MXD3Q9BW11 206 aa29.05■■■□□ 2.24
PDGFA-205ENST00000426681 HMMRO75330 724 aa29.04■■■□□ 2.24
PDGFA-205ENST00000426681 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.04■■■□□ 2.24
PDGFA-205ENST00000426681 ARAP2Q8WZ64 1704 aa29.03■■■□□ 2.24
PDGFA-205ENST00000426681 CLEC11AQ9Y240 323 aa29.03■■■□□ 2.24
PDGFA-205ENST00000426681 A0A1B0GUL7 405 aa29.02■■■□□ 2.24
PDGFA-205ENST00000426681 ZBTB22O15209 634 aa29.02■■■□□ 2.24
PDGFA-205ENST00000426681 HIRAP54198 1017 aaPredicted RBP29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms