RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 CABLES1Q8TDN4 633 aa15.74■□□□□ 0.11
LRCH3-203ENST00000425562 PPP1R13BQ96KQ4 1090 aa15.74■□□□□ 0.11
LRCH3-203ENST00000425562 NEK1Q96PY6 1258 aa15.74■□□□□ 0.11
LRCH3-203ENST00000425562 ZSWIM4Q9H7M6 989 aa15.74■□□□□ 0.11
LRCH3-203ENST00000425562 SYCP1Q15431 976 aa15.73■□□□□ 0.11
LRCH3-203ENST00000425562 ARMCX5Q6P1M9 558 aa15.73■□□□□ 0.11
LRCH3-203ENST00000425562 RBM43Q6ZSC3 357 aaKnown RBP15.73■□□□□ 0.11
LRCH3-203ENST00000425562 NBPF11Q86T75 865 aa15.73■□□□□ 0.11
LRCH3-203ENST00000425562 ARHGEF25Q86VW2 580 aa15.73■□□□□ 0.11
LRCH3-203ENST00000425562 CEP57L1Q8IYX8 460 aa15.73■□□□□ 0.11
LRCH3-203ENST00000425562 GPHNQ9NQX3 736 aaPredicted RBP15.73■□□□□ 0.11
LRCH3-203ENST00000425562 ATP1A3P13637 1013 aa15.72■□□□□ 0.11
LRCH3-203ENST00000425562 ST5P78524 1137 aa15.72■□□□□ 0.11
LRCH3-203ENST00000425562 MRFAP1L1Q96HT8 127 aa15.72■□□□□ 0.11
LRCH3-203ENST00000425562 FER1L4A9Z1Z3 1794 aa15.72■□□□□ 0.11
LRCH3-203ENST00000425562 EPB41L2O43491 1005 aaKnown RBP15.72■□□□□ 0.11
LRCH3-203ENST00000425562 HOXB7P09629 217 aa15.72■□□□□ 0.11
LRCH3-203ENST00000425562 TAF3Q5VWG9 929 aa15.72■□□□□ 0.11
LRCH3-203ENST00000425562 CFAP45Q9UL16 551 aa15.72■□□□□ 0.11
LRCH3-203ENST00000425562 FHOD1Q9Y613 1164 aa15.72■□□□□ 0.11
LRCH3-203ENST00000425562 PNMA6AP0CW24 399 aaPredicted RBP15.72■□□□□ 0.11
LRCH3-203ENST00000425562 ANKRD1Q15327 319 aa15.72■□□□□ 0.11
LRCH3-203ENST00000425562 SF3A1Q15459 793 aaKnown RBP15.72■□□□□ 0.11
LRCH3-203ENST00000425562 LINS1Q8NG48 757 aa15.72■□□□□ 0.11
LRCH3-203ENST00000425562 PTPDC1A2A3K4 754 aa15.71■□□□□ 0.11
LRCH3-203ENST00000425562 TAF5LO75529 589 aa15.71■□□□□ 0.11
LRCH3-203ENST00000425562 CYP21A2P08686 494 aa15.71■□□□□ 0.11
LRCH3-203ENST00000425562 SFPQP23246 707 aaKnown RBP eCLIP15.71■□□□□ 0.11
LRCH3-203ENST00000425562 PDIA6Q15084 440 aa15.71■□□□□ 0.11
LRCH3-203ENST00000425562 CHRNA2Q15822 529 aa15.71■□□□□ 0.11
LRCH3-203ENST00000425562 AMOTQ4VCS5 1084 aa15.71■□□□□ 0.11
LRCH3-203ENST00000425562 NFAT5O94916 1531 aa15.71■□□□□ 0.11
LRCH3-203ENST00000425562 ALDH1L1O75891 902 aa15.71■□□□□ 0.11
LRCH3-203ENST00000425562 CARD6Q9BX69 1037 aa15.71■□□□□ 0.11
LRCH3-203ENST00000425562 ANO10Q9NW15 660 aa15.71■□□□□ 0.11
LRCH3-203ENST00000425562 PLA2G4AP47712 749 aa15.7■□□□□ 0.1
LRCH3-203ENST00000425562 NDUFA8P51970 172 aa15.7■□□□□ 0.1
LRCH3-203ENST00000425562 MTX1Q13505 466 aa15.7■□□□□ 0.1
LRCH3-203ENST00000425562 MNS1Q8NEH6 495 aa15.7■□□□□ 0.1
LRCH3-203ENST00000425562 UBXN4Q92575 508 aa15.7■□□□□ 0.1
LRCH3-203ENST00000425562 CSB-PGBD3P0DP91 1061 aa15.7■□□□□ 0.1
LRCH3-203ENST00000425562 ADD1P35611 737 aaKnown RBP15.7■□□□□ 0.1
LRCH3-203ENST00000425562 BMS1Q14692 1282 aaKnown RBP15.7■□□□□ 0.1
LRCH3-203ENST00000425562 UBE3BQ7Z3V4 1068 aa15.7■□□□□ 0.1
LRCH3-203ENST00000425562 ZNF496Q96IT1 587 aaPredicted RBP15.7■□□□□ 0.1
LRCH3-203ENST00000425562 COL15A1P39059 1388 aa15.7■□□□□ 0.1
LRCH3-203ENST00000425562 ZNF790Q6PG37 636 aa15.69■□□□□ 0.1
LRCH3-203ENST00000425562 STOX1Q6ZVD7 989 aa15.69■□□□□ 0.1
LRCH3-203ENST00000425562 KRT28Q7Z3Y7 464 aa15.69■□□□□ 0.1
LRCH3-203ENST00000425562 ERC1Q8IUD2 1116 aa15.69■□□□□ 0.1
LRCH3-203ENST00000425562 DDX21Q9NR30 783 aaKnown RBP eCLIP15.69■□□□□ 0.1
LRCH3-203ENST00000425562 NPHP4O75161 1426 aaPredicted RBP15.69■□□□□ 0.1
LRCH3-203ENST00000425562 DDX58O95786 925 aaKnown RBP15.69■□□□□ 0.1
LRCH3-203ENST00000425562 UTP14AQ9BVJ6 771 aaKnown RBP15.69■□□□□ 0.1
LRCH3-203ENST00000425562 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.69■□□□□ 0.14e-8■■□□□ 14.5
LRCH3-203ENST00000425562 USP42Q9H9J4 1324 aaKnown RBP15.69■□□□□ 0.1
LRCH3-203ENST00000425562 TFCP2Q12800 502 aa15.69■□□□□ 0.1
LRCH3-203ENST00000425562 PCDHA7Q9UN72 937 aa15.69■□□□□ 0.1
LRCH3-203ENST00000425562 KDM3BQ7LBC6 1761 aa15.68■□□□□ 0.1
LRCH3-203ENST00000425562 NEURL1BA8MQ27 555 aa15.68■□□□□ 0.1
LRCH3-203ENST00000425562 RAPGEF4Q8WZA2 1011 aa15.68■□□□□ 0.1
LRCH3-203ENST00000425562 KCNB2Q92953 911 aa15.68■□□□□ 0.1
LRCH3-203ENST00000425562 FANCGO15287 622 aa15.68■□□□□ 0.1
LRCH3-203ENST00000425562 CTDNEP1O95476 244 aa15.68■□□□□ 0.1
LRCH3-203ENST00000425562 MARCKSP29966 332 aaPredicted RBP15.68■□□□□ 0.1
LRCH3-203ENST00000425562 CDC25BP30305 580 aa15.68■□□□□ 0.1
LRCH3-203ENST00000425562 NEXNQ0ZGT2 675 aa15.68■□□□□ 0.1
LRCH3-203ENST00000425562 SKIDA1Q1XH10 827 aa15.68■□□□□ 0.1
LRCH3-203ENST00000425562 TEX35Q5T0J7 233 aa15.68■□□□□ 0.1
LRCH3-203ENST00000425562 SARM1Q6SZW1 724 aa15.68■□□□□ 0.1
LRCH3-203ENST00000425562 TMCO3Q6UWJ1 677 aa15.68■□□□□ 0.1
LRCH3-203ENST00000425562 CLIC4Q9Y696 253 aa15.68■□□□□ 0.1
LRCH3-203ENST00000425562 FAM160A1Q05DH4 1040 aa15.67■□□□□ 0.1
LRCH3-203ENST00000425562 NSUN7Q8NE18 718 aaKnown RBP15.67■□□□□ 0.1
LRCH3-203ENST00000425562 DPF2Q92785 391 aa15.67■□□□□ 0.1
LRCH3-203ENST00000425562 CALCOCO1Q9P1Z2 691 aa15.67■□□□□ 0.1
LRCH3-203ENST00000425562 N4BP2Q86UW6 1770 aaPredicted RBP15.67■□□□□ 0.1
LRCH3-203ENST00000425562 HAND2P61296 217 aa15.67■□□□□ 0.1
LRCH3-203ENST00000425562 NEMFO60524 1076 aa15.66■□□□□ 0.1
LRCH3-203ENST00000425562 GCKRQ14397 625 aa15.66■□□□□ 0.1
LRCH3-203ENST00000425562 STK38Q15208 465 aa15.66■□□□□ 0.1
LRCH3-203ENST00000425562 PDILTQ8N807 584 aa15.66■□□□□ 0.1
LRCH3-203ENST00000425562 SMARCE1Q969G3 411 aa15.66■□□□□ 0.1
LRCH3-203ENST00000425562 DBNLQ9UJU6 430 aaKnown RBP15.66■□□□□ 0.1
LRCH3-203ENST00000425562 H2AFXP16104 143 aaPredicted RBP15.66■□□□□ 0.1
LRCH3-203ENST00000425562 HSP90AB3PQ58FF7 597 aa15.66■□□□□ 0.1
LRCH3-203ENST00000425562 TTLL5Q6EMB2 1281 aa15.66■□□□□ 0.1
LRCH3-203ENST00000425562 KRBA2Q6ZNG9 492 aa15.66■□□□□ 0.1
LRCH3-203ENST00000425562 DBNDD2Q9BQY9 259 aa15.66■□□□□ 0.1
LRCH3-203ENST00000425562 MED1Q15648 1581 aaPredicted RBP15.66■□□□□ 0.1
LRCH3-203ENST00000425562 TRIM66O15016 1216 aa15.66■□□□□ 0.1
LRCH3-203ENST00000425562 CYP2C19P33261 490 aa15.66■□□□□ 0.1
LRCH3-203ENST00000425562 ILDR1Q86SU0 546 aaPredicted RBP15.66■□□□□ 0.1
LRCH3-203ENST00000425562 NEUROD6Q96NK8 337 aa15.66■□□□□ 0.1
LRCH3-203ENST00000425562 RAD51AP2Q09MP3 1159 aa15.65■□□□□ 0.1
LRCH3-203ENST00000425562 RCOR1Q9UKL0 485 aa15.65■□□□□ 0.1
LRCH3-203ENST00000425562 TMEM232C9JQI7 657 aa15.65■□□□□ 0.1
LRCH3-203ENST00000425562 SASH3O75995 380 aa15.65■□□□□ 0.1
LRCH3-203ENST00000425562 CFAP100Q494V2 611 aa15.65■□□□□ 0.1
LRCH3-203ENST00000425562 C10orf67Q8IYJ2 551 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms