RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 SLIT1O75093 1534 aa8.81□□□□□ -1
SMARCC1-202ENST00000425518 BIN1O00499 593 aa8.8□□□□□ -1
SMARCC1-202ENST00000425518 PHKG2P15735 406 aa8.8□□□□□ -1
SMARCC1-202ENST00000425518 SNW1Q13573 536 aaKnown RBP8.8□□□□□ -1
SMARCC1-202ENST00000425518 IFIT1P09914 478 aaKnown RBP8.8□□□□□ -1
SMARCC1-202ENST00000425518 HSPD1P10809 573 aaKnown RBP8.8□□□□□ -1
SMARCC1-202ENST00000425518 PDIA3P30101 505 aaKnown RBP8.8□□□□□ -1
SMARCC1-202ENST00000425518 FAM160A1Q05DH4 1040 aa8.8□□□□□ -1
SMARCC1-202ENST00000425518 CEP57L1Q8IYX8 460 aa8.8□□□□□ -1
SMARCC1-202ENST00000425518 SYTL4Q96C24 671 aaPredicted RBP8.8□□□□□ -1
SMARCC1-202ENST00000425518 CABP4P57796 275 aa8.8□□□□□ -1
SMARCC1-202ENST00000425518 STK38Q15208 465 aa8.8□□□□□ -1
SMARCC1-202ENST00000425518 WASHC4Q2M389 1173 aa8.8□□□□□ -1
SMARCC1-202ENST00000425518 GORABQ5T7V8 394 aa8.8□□□□□ -1
SMARCC1-202ENST00000425518 ISM2Q6H9L7 571 aa8.8□□□□□ -1
SMARCC1-202ENST00000425518 IFNL2Q8IZJ0 200 aa8.8□□□□□ -1
SMARCC1-202ENST00000425518 CCDC85AQ96PX6 553 aaPredicted RBP8.8□□□□□ -1
SMARCC1-202ENST00000425518 MED1Q15648 1581 aaPredicted RBP8.79□□□□□ -1
SMARCC1-202ENST00000425518 SMC2O95347 1197 aa8.79□□□□□ -1
SMARCC1-202ENST00000425518 CHRNA2Q15822 529 aa8.79□□□□□ -1
SMARCC1-202ENST00000425518 LRRC24Q50LG9 513 aa8.79□□□□□ -1
SMARCC1-202ENST00000425518 CABLES1Q8TDN4 633 aa8.79□□□□□ -1
SMARCC1-202ENST00000425518 MRFAP1L1Q96HT8 127 aa8.79□□□□□ -1
SMARCC1-202ENST00000425518 GJB4Q9NTQ9 266 aa8.79□□□□□ -1
SMARCC1-202ENST00000425518 PCDHA7Q9UN72 937 aa8.79□□□□□ -1
SMARCC1-202ENST00000425518 ZNF330Q9Y3S2 320 aaPredicted RBP8.79□□□□□ -1
SMARCC1-202ENST00000425518 NCAPD2Q15021 1401 aa8.79□□□□□ -1
SMARCC1-202ENST00000425518 ADGRL3Q9HAR2 1447 aa8.79□□□□□ -1
SMARCC1-202ENST00000425518 EXOSC10Q01780 885 aaKnown RBP8.79□□□□□ -1
SMARCC1-202ENST00000425518 RABL6Q3YEC7 729 aaPredicted RBP8.79□□□□□ -1
SMARCC1-202ENST00000425518 DHX40Q8IX18 779 aaKnown RBP8.79□□□□□ -1
SMARCC1-202ENST00000425518 DDX17Q92841 729 aaKnown RBP8.79□□□□□ -1
SMARCC1-202ENST00000425518 ERBB3P21860 1342 aa8.79□□□□□ -1
SMARCC1-202ENST00000425518 NFAT5O94916 1531 aa8.79□□□□□ -1
SMARCC1-202ENST00000425518 ADAMTSL3P82987 1691 aa8.79□□□□□ -1
SMARCC1-202ENST00000425518 HSP90AB3PQ58FF7 597 aa8.79□□□□□ -1
SMARCC1-202ENST00000425518 SARM1Q6SZW1 724 aa8.79□□□□□ -1
SMARCC1-202ENST00000425518 NAT10Q9H0A0 1025 aaKnown RBP8.79□□□□□ -1
SMARCC1-202ENST00000425518 HELLSQ9NRZ9 838 aa8.79□□□□□ -1
SMARCC1-202ENST00000425518 JCADQ9P266 1359 aa8.78□□□□□ -1
SMARCC1-202ENST00000425518 CDC25BP30305 580 aa8.78□□□□□ -1
SMARCC1-202ENST00000425518 TTLL7Q6ZT98 887 aa8.78□□□□□ -1
SMARCC1-202ENST00000425518 ENGASEQ8NFI3 743 aa8.78□□□□□ -1
SMARCC1-202ENST00000425518 MRPS27Q92552 414 aaKnown RBP8.78□□□□□ -1
SMARCC1-202ENST00000425518 ZBTB3Q9H5J0 574 aa8.78□□□□□ -1
SMARCC1-202ENST00000425518 ZNF215Q9UL58 517 aaPredicted RBP8.78□□□□□ -1
SMARCC1-202ENST00000425518 RNF113AO15541 343 aaKnown RBP8.78□□□□□ -1
SMARCC1-202ENST00000425518 NDUFA8P51970 172 aa8.78□□□□□ -1
SMARCC1-202ENST00000425518 ZMYM1Q5SVZ6 1142 aa8.78□□□□□ -1
SMARCC1-202ENST00000425518 ILDR1Q86SU0 546 aaPredicted RBP8.78□□□□□ -1
SMARCC1-202ENST00000425518 DSCC1Q9BVC3 393 aa8.78□□□□□ -1
SMARCC1-202ENST00000425518 CLIC4Q9Y696 253 aa8.78□□□□□ -1
SMARCC1-202ENST00000425518 CPLX1O14810 134 aa8.78□□□□□ -1
SMARCC1-202ENST00000425518 NEMFO60524 1076 aa8.78□□□□□ -1
SMARCC1-202ENST00000425518 ATG9AQ7Z3C6 839 aa8.78□□□□□ -1
SMARCC1-202ENST00000425518 PLBD2Q8NHP8 589 aa8.78□□□□□ -1
SMARCC1-202ENST00000425518 C8orf76Q96K31 380 aa8.78□□□□□ -1
SMARCC1-202ENST00000425518 PUS3Q9BZE2 481 aaKnown RBP8.78□□□□□ -1
SMARCC1-202ENST00000425518 CRYBG1Q9Y4K1 1723 aa8.77□□□□□ -1
SMARCC1-202ENST00000425518 A0A1B0GUL7 405 aa8.77□□□□□ -1
SMARCC1-202ENST00000425518 FDPSP14324 419 aaKnown RBP8.77□□□□□ -1
SMARCC1-202ENST00000425518 SYNE3Q6ZMZ3 975 aa8.77□□□□□ -1
SMARCC1-202ENST00000425518 LRP10Q7Z4F1 713 aa8.77□□□□□ -1
SMARCC1-202ENST00000425518 MAST3O60307 1309 aa8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 SH3TC1Q8TE82 1336 aa8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 M0R2C6 588 aa8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 CYP27B1O15528 508 aa8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 FOXO4P98177 505 aa8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 DPCR1Q3MIW9 517 aa8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 UTP14CQ5TAP6 766 aaKnown RBP8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 TMC6Q7Z403 805 aa8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 PROSER2Q86WR7 435 aaPredicted RBP8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 OSBP2Q969R2 916 aa8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 FEZ1Q99689 392 aa8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 GTPBP4Q9BZE4 634 aaKnown RBP8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 OGFRQ9NZT2 677 aa8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 IFNKQ9P0W0 207 aa8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 CGNQ9P2M7 1197 aaKnown RBP8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 ORC3Q9UBD5 711 aaPredicted RBP8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 CTNNA3Q9UI47 895 aa8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 KLF18A0A0U1RQI7 1052 aa8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 A1BGP04217 495 aa8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 IL15P40933 162 aaPredicted RBP8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 ZNF771Q7L3S4 317 aaPredicted RBP8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 ZNF274Q96GC6 653 aaPredicted RBP8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 CWC25Q9NXE8 425 aaPredicted RBP8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 KDM3BQ7LBC6 1761 aa8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 N4BP2Q86UW6 1770 aaPredicted RBP8.77□□□□□ -1.01
SMARCC1-202ENST00000425518 LTN1O94822 1766 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 GOLGA8BA8MQT2 603 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 MARCKSP29966 332 aaPredicted RBP8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 CASP7P55210 303 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 RBM6P78332 1123 aaKnown RBP8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 CCZ1BP86790 482 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 CCZ1P86791 482 aaPredicted RBP8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 ADALQ6DHV7 355 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 FMR1NBQ8N0W7 255 aaPredicted RBP8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 CCAR2Q8N163 923 aaKnown RBP8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 KIF18AQ8NI77 898 aa8.76□□□□□ -1.01
SMARCC1-202ENST00000425518 DCAF5Q96JK2 942 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 2046.3 ms