RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 RILPL2Q969X0 211 aa12.57□□□□□ -0.4
MDC1-205ENST00000425072 EVI5LQ96CN4 794 aa12.57□□□□□ -0.4
MDC1-205ENST00000425072 PODXL2Q9NZ53 605 aa12.57□□□□□ -0.4
MDC1-205ENST00000425072 NSFL1CQ9UNZ2 370 aaKnown RBP12.57□□□□□ -0.4
MDC1-205ENST00000425072 XDHP47989 1333 aa12.57□□□□□ -0.4
MDC1-205ENST00000425072 HIP1O00291 1037 aa12.56□□□□□ -0.4
MDC1-205ENST00000425072 SDSP20132 328 aa12.56□□□□□ -0.4
MDC1-205ENST00000425072 LRRFIP1Q32MZ4 808 aaKnown RBP12.56□□□□□ -0.4
MDC1-205ENST00000425072 TTLL6Q8N841 843 aa12.56□□□□□ -0.4
MDC1-205ENST00000425072 HAUS7Q99871 368 aa12.56□□□□□ -0.4
MDC1-205ENST00000425072 BACH2Q9BYV9 841 aa12.56□□□□□ -0.4
MDC1-205ENST00000425072 BOLA2Q9H3K6 86 aa12.56□□□□□ -0.4
MDC1-205ENST00000425072 ZNF804BA4D1E1 1349 aa12.56□□□□□ -0.4
MDC1-205ENST00000425072 CDC45O75419 566 aa12.55□□□□□ -0.4
MDC1-205ENST00000425072 C15orf52Q6ZUT6 534 aaKnown RBP12.55□□□□□ -0.4
MDC1-205ENST00000425072 MPNDQ8N594 471 aa12.55□□□□□ -0.4
MDC1-205ENST00000425072 PIM2Q9P1W9 311 aa12.55□□□□□ -0.4
MDC1-205ENST00000425072 GGA1Q9UJY5 639 aa12.55□□□□□ -0.4
MDC1-205ENST00000425072 CASZ1Q86V15 1759 aa12.55□□□□□ -0.4
MDC1-205ENST00000425072 ANKRD31Q8N7Z5 1873 aa12.55□□□□□ -0.4
MDC1-205ENST00000425072 GSPT1P15170 499 aaKnown RBP12.54□□□□□ -0.4
MDC1-205ENST00000425072 HIBADHP31937 336 aaKnown RBP12.54□□□□□ -0.4
MDC1-205ENST00000425072 TTF1Q15361 905 aaPredicted RBP12.54□□□□□ -0.4
MDC1-205ENST00000425072 TSHZ3Q63HK5 1081 aa12.54□□□□□ -0.4
MDC1-205ENST00000425072 CCDC102BQ68D86 513 aa12.54□□□□□ -0.4
MDC1-205ENST00000425072 FBXO33Q7Z6M2 555 aa12.54□□□□□ -0.4
MDC1-205ENST00000425072 TLR7Q9NYK1 1049 aaKnown RBP12.54□□□□□ -0.4
MDC1-205ENST00000425072 ZNF609O15014 1411 aa12.54□□□□□ -0.4
MDC1-205ENST00000425072 A0A0G2JLW4 131 aa12.53□□□□□ -0.4
MDC1-205ENST00000425072 C6orf229H3BNL8 230 aa12.53□□□□□ -0.4
MDC1-205ENST00000425072 SEMA3EO15041 775 aa12.53□□□□□ -0.4
MDC1-205ENST00000425072 IGSF3O75054 1194 aa12.53□□□□□ -0.4
MDC1-205ENST00000425072 CHRNA5P30532 468 aa12.53□□□□□ -0.4
MDC1-205ENST00000425072 ADORA1P30542 326 aa12.53□□□□□ -0.4
MDC1-205ENST00000425072 GPSM2P81274 684 aa12.53□□□□□ -0.4
MDC1-205ENST00000425072 FKBP4Q02790 459 aaKnown RBP eCLIP12.53□□□□□ -0.4
MDC1-205ENST00000425072 SOGA3Q5TF21 947 aa12.53□□□□□ -0.4
MDC1-205ENST00000425072 RTKN2Q8IZC4 609 aa12.53□□□□□ -0.4
MDC1-205ENST00000425072 SUPT20HQ8NEM7 779 aa12.53□□□□□ -0.4
MDC1-205ENST00000425072 RUFY2Q8WXA3 655 aa12.53□□□□□ -0.4
MDC1-205ENST00000425072 FAM84BQ96KN1 310 aaPredicted RBP12.53□□□□□ -0.4
MDC1-205ENST00000425072 EYA3Q99504 573 aa12.53□□□□□ -0.4
MDC1-205ENST00000425072 SGIP1Q9BQI5 828 aa12.53□□□□□ -0.4
MDC1-205ENST00000425072 ZC3H12CQ9C0D7 883 aaKnown RBP12.53□□□□□ -0.4
MDC1-205ENST00000425072 TNRC6CQ9HCJ0 1690 aaKnown RBP12.52□□□□□ -0.4
MDC1-205ENST00000425072 FRAT2O75474 233 aaPredicted RBP12.52□□□□□ -0.41
MDC1-205ENST00000425072 DPEP1P16444 411 aa12.52□□□□□ -0.41
MDC1-205ENST00000425072 ARID4AP29374 1257 aaPredicted RBP12.52□□□□□ -0.41
MDC1-205ENST00000425072 PTGER2P43116 358 aa12.52□□□□□ -0.41
MDC1-205ENST00000425072 BCAMP50895 628 aa12.52□□□□□ -0.41
MDC1-205ENST00000425072 PRPF40BQ6NWY9 871 aaKnown RBP12.52□□□□□ -0.41
MDC1-205ENST00000425072 DPP8Q6V1X1 898 aaPredicted RBP12.52□□□□□ -0.41
MDC1-205ENST00000425072 ZNF804AQ7Z570 1209 aa12.52□□□□□ -0.41
MDC1-205ENST00000425072 UPF2Q9HAU5 1272 aaKnown RBP12.52□□□□□ -0.41
MDC1-205ENST00000425072 PAG1Q9NWQ8 432 aa12.52□□□□□ -0.41
MDC1-205ENST00000425072 PPP1R1BQ9UD71 204 aaPredicted RBP12.52□□□□□ -0.41
MDC1-205ENST00000425072 DENND2AQ9ULE3 1009 aa12.52□□□□□ -0.41
MDC1-205ENST00000425072 SPEF2Q9C093 1822 aa12.52□□□□□ -0.41
MDC1-205ENST00000425072 C10orf71Q711Q0 1435 aa12.52□□□□□ -0.41
MDC1-205ENST00000425072 SNAP23O00161 211 aa12.51□□□□□ -0.41
MDC1-205ENST00000425072 UFL1O94874 794 aa12.51□□□□□ -0.41
MDC1-205ENST00000425072 MAP4K4O95819 1239 aaPredicted RBP12.51□□□□□ -0.41
MDC1-205ENST00000425072 KCNA3P22001 575 aa12.51□□□□□ -0.41
MDC1-205ENST00000425072 PHKA1P46020 1223 aa12.51□□□□□ -0.41
MDC1-205ENST00000425072 C8orf34Q49A92 452 aa12.51□□□□□ -0.41
MDC1-205ENST00000425072 ZSCAN25Q6NSZ9 544 aa12.51□□□□□ -0.41
MDC1-205ENST00000425072 SPATA5Q8NB90 893 aa12.51□□□□□ -0.41
MDC1-205ENST00000425072 TBC1D16Q8TBP0 767 aa12.51□□□□□ -0.41
MDC1-205ENST00000425072 C7orf43Q8WVR3 580 aa12.51□□□□□ -0.41
MDC1-205ENST00000425072 DNAJC2Q99543 621 aaKnown RBP12.51□□□□□ -0.41
MDC1-205ENST00000425072 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.51□□□□□ -0.41
MDC1-205ENST00000425072 G3V3G9 751 aa12.5□□□□□ -0.41
MDC1-205ENST00000425072 ZFYP08048 801 aaPredicted RBP12.5□□□□□ -0.41
MDC1-205ENST00000425072 GYG1P46976 350 aa12.5□□□□□ -0.41
MDC1-205ENST00000425072 WASHC4Q2M389 1173 aa12.5□□□□□ -0.41
MDC1-205ENST00000425072 DALRD3Q5D0E6 543 aaKnown RBP12.5□□□□□ -0.41
MDC1-205ENST00000425072 DCAF8Q5TAQ9 597 aa12.5□□□□□ -0.41
MDC1-205ENST00000425072 KBTBD3Q8NAB2 608 aa12.5□□□□□ -0.41
MDC1-205ENST00000425072 FSD1Q9BTV5 496 aa12.5□□□□□ -0.41
MDC1-205ENST00000425072 VPS33BQ9H267 617 aa12.5□□□□□ -0.41
MDC1-205ENST00000425072 POLLQ9UGP5 575 aa12.5□□□□□ -0.41
MDC1-205ENST00000425072 GOLIM4O00461 696 aa12.49□□□□□ -0.41
MDC1-205ENST00000425072 CHMLP26374 656 aa12.49□□□□□ -0.41
MDC1-205ENST00000425072 TMED8Q6PL24 325 aaPredicted RBP12.49□□□□□ -0.41
MDC1-205ENST00000425072 TBC1D9Q6ZT07 1266 aa12.49□□□□□ -0.41
MDC1-205ENST00000425072 ZGPATQ8N5A5 531 aaKnown RBP12.49□□□□□ -0.41
MDC1-205ENST00000425072 COA1Q9GZY4 146 aa12.49□□□□□ -0.41
MDC1-205ENST00000425072 SNRKQ9NRH2 765 aa12.49□□□□□ -0.41
MDC1-205ENST00000425072 DIAPH3Q9NSV4 1193 aa12.49□□□□□ -0.41
MDC1-205ENST00000425072 HMG20BQ9P0W2 317 aa12.49□□□□□ -0.41
MDC1-205ENST00000425072 AK9Q5TCS8 1911 aa12.49□□□□□ -0.41
MDC1-205ENST00000425072 PDS5AQ29RF7 1337 aaKnown RBP12.48□□□□□ -0.41
MDC1-205ENST00000425072 C21orf2O43822 256 aa12.48□□□□□ -0.41
MDC1-205ENST00000425072 REC8O95072 547 aa12.48□□□□□ -0.41
MDC1-205ENST00000425072 MCAMP43121 646 aa12.48□□□□□ -0.41
MDC1-205ENST00000425072 ZAP70P43403 619 aa12.48□□□□□ -0.41
MDC1-205ENST00000425072 MAP3K12Q12852 859 aa12.48□□□□□ -0.41
MDC1-205ENST00000425072 CCDC93Q567U6 631 aa12.48□□□□□ -0.41
MDC1-205ENST00000425072 SPTY2D1Q68D10 685 aaPredicted RBP12.48□□□□□ -0.41
MDC1-205ENST00000425072 KIAA1211Q6ZU35 1233 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms