RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 CSF1RP07333 972 aa22.63■■□□□ 1.21
GPC1-203ENST00000425056 ITGA6P23229 1130 aa22.63■■□□□ 1.21
GPC1-203ENST00000425056 BRPF1P55201 1214 aaPredicted RBP22.63■■□□□ 1.21
GPC1-203ENST00000425056 HUNKP57058 714 aa22.63■■□□□ 1.21
GPC1-203ENST00000425056 SPINK5Q9NQ38 1064 aaPredicted RBP22.63■■□□□ 1.21
GPC1-203ENST00000425056 ASTN2O75129 1339 aaPredicted RBP22.62■■□□□ 1.21
GPC1-203ENST00000425056 SULF1Q8IWU6 871 aa22.62■■□□□ 1.21
GPC1-203ENST00000425056 GBA2Q9HCG7 927 aaPredicted RBP22.62■■□□□ 1.21
GPC1-203ENST00000425056 LEMD3Q9Y2U8 911 aa22.62■■□□□ 1.21
GPC1-203ENST00000425056 CA12O43570 354 aa22.61■■□□□ 1.21
GPC1-203ENST00000425056 USP17L8P0C7I0 530 aa22.61■■□□□ 1.21
GPC1-203ENST00000425056 NOGQ13253 232 aa22.61■■□□□ 1.21
GPC1-203ENST00000425056 COA1Q9GZY4 146 aa22.6■■□□□ 1.21
GPC1-203ENST00000425056 MYOZ2Q9NPC6 264 aa22.6■■□□□ 1.21
GPC1-203ENST00000425056 PITPNM2Q9BZ72 1349 aa22.59■■□□□ 1.21
GPC1-203ENST00000425056 SCARF1Q14162 830 aa22.59■■□□□ 1.21
GPC1-203ENST00000425056 DACT2Q5SW24 774 aa22.59■■□□□ 1.21
GPC1-203ENST00000425056 BEND3Q5T5X7 828 aa22.59■■□□□ 1.21
GPC1-203ENST00000425056 ANGEL2Q5VTE6 544 aaKnown RBP22.59■■□□□ 1.21
GPC1-203ENST00000425056 TXNRD3Q86VQ6 643 aa22.59■■□□□ 1.21
GPC1-203ENST00000425056 C2orf69Q8N8R5 385 aa22.59■■□□□ 1.21
GPC1-203ENST00000425056 MPHOSPH8Q99549 860 aa22.59■■□□□ 1.21
GPC1-203ENST00000425056 ANKRD2Q9GZV1 360 aa22.59■■□□□ 1.21
GPC1-203ENST00000425056 ZNF804BA4D1E1 1349 aa22.58■■□□□ 1.21
GPC1-203ENST00000425056 F6X3S4 739 aa22.58■■□□□ 1.21
GPC1-203ENST00000425056 RGMBQ6NW40 437 aa22.58■■□□□ 1.21
GPC1-203ENST00000425056 FAM9BQ8IZU0 186 aa22.58■■□□□ 1.21
GPC1-203ENST00000425056 CDCA5Q96FF9 252 aa22.58■■□□□ 1.21
GPC1-203ENST00000425056 PAPPA2Q9BXP8 1791 aa22.58■■□□□ 1.2
GPC1-203ENST00000425056 MYO3BQ8WXR4 1341 aa22.57■■□□□ 1.2
GPC1-203ENST00000425056 STRIP1Q5VSL9 837 aa22.57■■□□□ 1.2
GPC1-203ENST00000425056 ANKRD18BA2A2Z9 1011 aa22.56■■□□□ 1.2
GPC1-203ENST00000425056 FAM155AB1AL88 458 aaPredicted RBP22.56■■□□□ 1.2
GPC1-203ENST00000425056 KLRK1P26718 216 aa22.56■■□□□ 1.2
GPC1-203ENST00000425056 FOXO4P98177 505 aa22.56■■□□□ 1.2
GPC1-203ENST00000425056 CHRNDQ07001 517 aa22.56■■□□□ 1.2
GPC1-203ENST00000425056 ZIC5Q96T25 663 aa22.56■■□□□ 1.2
GPC1-203ENST00000425056 TSKSQ9UJT2 592 aa22.56■■□□□ 1.2
GPC1-203ENST00000425056 ZNF521Q96K83 1311 aa22.55■■□□□ 1.2
GPC1-203ENST00000425056 CCDC102AQ96A19 550 aa22.54■■□□□ 1.2
GPC1-203ENST00000425056 MXD3Q9BW11 206 aa22.54■■□□□ 1.2
GPC1-203ENST00000425056 IRS2Q9Y4H2 1338 aa22.54■■□□□ 1.2
GPC1-203ENST00000425056 MMP14P50281 582 aa22.53■■□□□ 1.2
GPC1-203ENST00000425056 IFIT5Q13325 482 aaKnown RBP22.53■■□□□ 1.2
GPC1-203ENST00000425056 OGFOD1Q8N543 542 aa22.53■■□□□ 1.2
GPC1-203ENST00000425056 FBXW7Q969H0 707 aa22.53■■□□□ 1.2
GPC1-203ENST00000425056 ABHD8Q96I13 439 aa22.53■■□□□ 1.2
GPC1-203ENST00000425056 GRM8O00222 908 aa22.52■■□□□ 1.2
GPC1-203ENST00000425056 SLC10A3P09131 477 aa22.52■■□□□ 1.2
GPC1-203ENST00000425056 KCNJ4P48050 445 aa22.52■■□□□ 1.2
GPC1-203ENST00000425056 ZNF157P51786 506 aaPredicted RBP22.52■■□□□ 1.2
GPC1-203ENST00000425056 FKBP1BP68106 108 aa22.52■■□□□ 1.2
GPC1-203ENST00000425056 CASP8AP2Q9UKL3 1982 aa22.52■■□□□ 1.2
GPC1-203ENST00000425056 NBPF9Q3BBW0 867 aa22.51■■□□□ 1.19
GPC1-203ENST00000425056 TTLL5Q6EMB2 1281 aa22.51■■□□□ 1.19
GPC1-203ENST00000425056 C15orf52Q6ZUT6 534 aaKnown RBP22.51■■□□□ 1.19
GPC1-203ENST00000425056 WNT10BO00744 389 aa22.5■■□□□ 1.19
GPC1-203ENST00000425056 ALDH1L1O75891 902 aa22.5■■□□□ 1.19
GPC1-203ENST00000425056 EPHA10Q5JZY3 1008 aa22.5■■□□□ 1.19
GPC1-203ENST00000425056 LMBR1LQ6UX01 489 aa22.5■■□□□ 1.19
GPC1-203ENST00000425056 CHMP3Q9Y3E7 222 aa22.5■■□□□ 1.19
GPC1-203ENST00000425056 AKAP11Q9UKA4 1901 aa22.5■■□□□ 1.19
GPC1-203ENST00000425056 CD209Q9NNX6 404 aa22.49■■□□□ 1.19
GPC1-203ENST00000425056 ECM29Q5VYK3 1845 aa22.48■■□□□ 1.19
GPC1-203ENST00000425056 SNAP23O00161 211 aa22.48■■□□□ 1.19
GPC1-203ENST00000425056 TAF5LO75529 589 aa22.48■■□□□ 1.19
GPC1-203ENST00000425056 GTF2IP78347 998 aa22.48■■□□□ 1.19
GPC1-203ENST00000425056 KIF23Q02241 960 aaPredicted RBP22.48■■□□□ 1.19
GPC1-203ENST00000425056 SAGE1Q9NXZ1 904 aa22.48■■□□□ 1.19
GPC1-203ENST00000425056 SCAF8Q9UPN6 1271 aaKnown RBP22.48■■□□□ 1.19
GPC1-203ENST00000425056 SASH1O94885 1247 aa22.47■■□□□ 1.19
GPC1-203ENST00000425056 CCDC57Q2TAC2 916 aa22.47■■□□□ 1.19
GPC1-203ENST00000425056 RASAL3Q86YV0 1011 aa22.47■■□□□ 1.19
GPC1-203ENST00000425056 KIAA0825Q8IV33 1275 aa22.47■■□□□ 1.19
GPC1-203ENST00000425056 HELBQ8NG08 1087 aaPredicted RBP22.47■■□□□ 1.19
GPC1-203ENST00000425056 SRCIN1Q9C0H9 1055 aa22.47■■□□□ 1.19
GPC1-203ENST00000425056 C9orf78Q9NZ63 289 aaPredicted RBP22.47■■□□□ 1.19
GPC1-203ENST00000425056 HDAC9Q9UKV0 1011 aa22.47■■□□□ 1.19
GPC1-203ENST00000425056 SLC4A10Q6U841 1118 aa22.46■■□□□ 1.19
GPC1-203ENST00000425056 ZBED3Q96IU2 234 aaPredicted RBP22.46■■□□□ 1.19
GPC1-203ENST00000425056 TAF7LQ5H9L4 462 aa22.45■■□□□ 1.18
GPC1-203ENST00000425056 LDHAL6AQ6ZMR3 332 aa22.45■■□□□ 1.18
GPC1-203ENST00000425056 ZNF804AQ7Z570 1209 aa22.45■■□□□ 1.18
GPC1-203ENST00000425056 ZNF594Q96JF6 807 aaPredicted RBP22.45■■□□□ 1.18
GPC1-203ENST00000425056 UTYO14607 1347 aa22.44■■□□□ 1.18
GPC1-203ENST00000425056 COL1A1P02452 1464 aaPredicted RBP22.44■■□□□ 1.18
GPC1-203ENST00000425056 IL1R1P14778 569 aa22.44■■□□□ 1.18
GPC1-203ENST00000425056 APOBEC3FQ8IUX4 373 aaKnown RBP22.44■■□□□ 1.18
GPC1-203ENST00000425056 CERS5Q8N5B7 392 aa22.44■■□□□ 1.18
GPC1-203ENST00000425056 PRAMEF18Q5VWM3 479 aa22.43■■□□□ 1.18
GPC1-203ENST00000425056 MOB2Q70IA6 237 aa22.43■■□□□ 1.18
GPC1-203ENST00000425056 KAZALD1Q96I82 304 aa22.43■■□□□ 1.18
GPC1-203ENST00000425056 SUCLG2Q96I99 432 aa22.43■■□□□ 1.18
GPC1-203ENST00000425056 CSRNP1Q96S65 589 aa22.43■■□□□ 1.18
GPC1-203ENST00000425056 ARAP2Q8WZ64 1704 aa22.43■■□□□ 1.18
GPC1-203ENST00000425056 NF2P35240 595 aa22.42■■□□□ 1.18
GPC1-203ENST00000425056 FKBP1AP62942 108 aaKnown RBP22.42■■□□□ 1.18
GPC1-203ENST00000425056 REM2Q8IYK8 340 aaPredicted RBP22.42■■□□□ 1.18
GPC1-203ENST00000425056 CNNM1Q9NRU3 951 aa22.42■■□□□ 1.18
GPC1-203ENST00000425056 RNF186Q9NXI6 227 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms