RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 CDCA7LQ96GN5 454 aa14.03□□□□□ -0.16
SSBP3-206ENST00000420121 KAZALD1Q96I82 304 aa14.03□□□□□ -0.16
SSBP3-206ENST00000420121 LEMD3Q9Y2U8 911 aa14.03□□□□□ -0.16
SSBP3-206ENST00000420121 ASTN2O75129 1339 aaPredicted RBP14.03□□□□□ -0.16
SSBP3-206ENST00000420121 ZNF804BA4D1E1 1349 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 UTYO14607 1347 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 USP17L3A6NCW0 530 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 USP17L4A6NCW7 530 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 G3V3G9 751 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 SNAP23O00161 211 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 CELF2O95319 508 aaKnown RBP14.02□□□□□ -0.17
SSBP3-206ENST00000420121 CHRNDQ07001 517 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 KIF4BQ2VIQ3 1234 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 DACT2Q5SW24 774 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 RBM26Q5T8P6 1007 aaKnown RBP14.02□□□□□ -0.17
SSBP3-206ENST00000420121 DCAF8Q5TAQ9 597 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 CYP4F22Q6NT55 531 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 LMBR1LQ6UX01 489 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 USP17L1Q7RTZ2 530 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 SAPCD2Q86UD0 394 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 USP48Q86UV5 1035 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 SSH1Q8WYL5 1049 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 WBP1LQ9NX94 342 aa14.02□□□□□ -0.17
SSBP3-206ENST00000420121 ANKRD18BA2A2Z9 1011 aa14.01□□□□□ -0.17
SSBP3-206ENST00000420121 CCER2I3L3R5 266 aa14.01□□□□□ -0.17
SSBP3-206ENST00000420121 SLC4A10Q6U841 1118 aa14.01□□□□□ -0.17
SSBP3-206ENST00000420121 CAPNS2Q96L46 248 aa14.01□□□□□ -0.17
SSBP3-206ENST00000420121 MPHOSPH8Q99549 860 aa14.01□□□□□ -0.17
SSBP3-206ENST00000420121 MXD3Q9BW11 206 aa14.01□□□□□ -0.17
SSBP3-206ENST00000420121 SRCIN1Q9C0H9 1055 aa14.01□□□□□ -0.17
SSBP3-206ENST00000420121 ANKRD2Q9GZV1 360 aa14.01□□□□□ -0.17
SSBP3-206ENST00000420121 COA1Q9GZY4 146 aa14.01□□□□□ -0.17
SSBP3-206ENST00000420121 ECM29Q5VYK3 1845 aa14□□□□□ -0.17
SSBP3-206ENST00000420121 ADM5C9JUS6 153 aa14□□□□□ -0.17
SSBP3-206ENST00000420121 TAF5LO75529 589 aa14□□□□□ -0.17
SSBP3-206ENST00000420121 NBPF7P0C2Y1 421 aaPredicted RBP14□□□□□ -0.17
SSBP3-206ENST00000420121 IFIT5Q13325 482 aaKnown RBP14□□□□□ -0.17
SSBP3-206ENST00000420121 SUCLG2Q96I99 432 aa14□□□□□ -0.17
SSBP3-206ENST00000420121 ZNF594Q96JF6 807 aaPredicted RBP14□□□□□ -0.17
SSBP3-206ENST00000420121 GGA3Q9NZ52 723 aa14□□□□□ -0.17
SSBP3-206ENST00000420121 USP17L8P0C7I0 530 aa13.99□□□□□ -0.17
SSBP3-206ENST00000420121 STRIP1Q5VSL9 837 aa13.99□□□□□ -0.17
SSBP3-206ENST00000420121 C15orf52Q6ZUT6 534 aaKnown RBP13.99□□□□□ -0.17
SSBP3-206ENST00000420121 KRT26Q7Z3Y9 468 aa13.99□□□□□ -0.17
SSBP3-206ENST00000420121 HELBQ8NG08 1087 aaPredicted RBP13.99□□□□□ -0.17
SSBP3-206ENST00000420121 HHIPL1Q96JK4 782 aa13.99□□□□□ -0.17
SSBP3-206ENST00000420121 C9orf78Q9NZ63 289 aaPredicted RBP13.99□□□□□ -0.17
SSBP3-206ENST00000420121 PTPRCP08575 1304 aa13.98□□□□□ -0.17
SSBP3-206ENST00000420121 ZNF408Q9H9D4 720 aa13.98□□□□□ -0.17
SSBP3-206ENST00000420121 MYOZ2Q9NPC6 264 aa13.98□□□□□ -0.17
SSBP3-206ENST00000420121 CHMP3Q9Y3E7 222 aa13.98□□□□□ -0.17
SSBP3-206ENST00000420121 ARAP2Q8WZ64 1704 aa13.98□□□□□ -0.17
SSBP3-206ENST00000420121 AOC2O75106 756 aa13.97□□□□□ -0.17
SSBP3-206ENST00000420121 SCARF1Q14162 830 aa13.97□□□□□ -0.17
SSBP3-206ENST00000420121 RABL6Q3YEC7 729 aaPredicted RBP13.97□□□□□ -0.17
SSBP3-206ENST00000420121 ANGEL2Q5VTE6 544 aaKnown RBP13.97□□□□□ -0.17
SSBP3-206ENST00000420121 ANKRD44Q8N8A2 993 aa13.97□□□□□ -0.17
SSBP3-206ENST00000420121 DCPSQ96C86 337 aaKnown RBP13.97□□□□□ -0.17
SSBP3-206ENST00000420121 CD209Q9NNX6 404 aa13.97□□□□□ -0.17
SSBP3-206ENST00000420121 HSPA8P11142 646 aaKnown RBP13.96□□□□□ -0.17
SSBP3-206ENST00000420121 ECE1P42892 770 aa13.96□□□□□ -0.17
SSBP3-206ENST00000420121 CCDC57Q2TAC2 916 aa13.96□□□□□ -0.17
SSBP3-206ENST00000420121 NBPF9Q3BBW0 867 aa13.96□□□□□ -0.17
SSBP3-206ENST00000420121 ALDH1L2Q3SY69 923 aa13.96□□□□□ -0.17
SSBP3-206ENST00000420121 LDHAL6AQ6ZMR3 332 aa13.96□□□□□ -0.17
SSBP3-206ENST00000420121 CERS5Q8N5B7 392 aa13.96□□□□□ -0.17
SSBP3-206ENST00000420121 PUS3Q9BZE2 481 aaKnown RBP13.96□□□□□ -0.17
SSBP3-206ENST00000420121 BICC1Q9H694 974 aaKnown RBP13.96□□□□□ -0.17
SSBP3-206ENST00000420121 PAPPA2Q9BXP8 1791 aa13.96□□□□□ -0.18
SSBP3-206ENST00000420121 MYO3BQ8WXR4 1341 aa13.95□□□□□ -0.18
SSBP3-206ENST00000420121 PITPNM2Q9BZ72 1349 aa13.95□□□□□ -0.18
SSBP3-206ENST00000420121 IL1R1P14778 569 aa13.95□□□□□ -0.18
SSBP3-206ENST00000420121 CTCFP49711 727 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-206ENST00000420121 GTF2IP78347 998 aa13.95□□□□□ -0.18
SSBP3-206ENST00000420121 MAP2K1Q02750 393 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-206ENST00000420121 GRM1Q13255 1194 aa13.95□□□□□ -0.18
SSBP3-206ENST00000420121 TTLL5Q6EMB2 1281 aa13.95□□□□□ -0.18
SSBP3-206ENST00000420121 PAXIP1Q6ZW49 1069 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-206ENST00000420121 TNS4Q8IZW8 715 aa13.95□□□□□ -0.18
SSBP3-206ENST00000420121 CDCA5Q96FF9 252 aa13.95□□□□□ -0.18
SSBP3-206ENST00000420121 ZBED3Q96IU2 234 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-206ENST00000420121 ZIC5Q96T25 663 aa13.95□□□□□ -0.18
SSBP3-206ENST00000420121 USP44Q9H0E7 712 aa13.95□□□□□ -0.18
SSBP3-206ENST00000420121 GBA2Q9HCG7 927 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-206ENST00000420121 PRDM10Q9NQV6 1147 aa13.95□□□□□ -0.18
SSBP3-206ENST00000420121 FAM155AB1AL88 458 aaPredicted RBP13.94□□□□□ -0.18
SSBP3-206ENST00000420121 WNT10BO00744 389 aa13.94□□□□□ -0.18
SSBP3-206ENST00000420121 MAP2K2P36507 400 aa13.94□□□□□ -0.18
SSBP3-206ENST00000420121 KCNJ4P48050 445 aa13.94□□□□□ -0.18
SSBP3-206ENST00000420121 LBX1P52954 281 aa13.94□□□□□ -0.18
SSBP3-206ENST00000420121 HUNKP57058 714 aa13.94□□□□□ -0.18
SSBP3-206ENST00000420121 SULF1Q8IWU6 871 aa13.94□□□□□ -0.18
SSBP3-206ENST00000420121 SCAF8Q9UPN6 1271 aaKnown RBP13.94□□□□□ -0.18
SSBP3-206ENST00000420121 RIPOR2Q9Y4F9 1068 aa13.94□□□□□ -0.18
SSBP3-206ENST00000420121 BRPF1P55201 1214 aaPredicted RBP13.93□□□□□ -0.18
SSBP3-206ENST00000420121 KIAA0825Q8IV33 1275 aa13.93□□□□□ -0.18
SSBP3-206ENST00000420121 FBXW7Q969H0 707 aa13.93□□□□□ -0.18
SSBP3-206ENST00000420121 AIDAQ96BJ3 306 aa13.93□□□□□ -0.18
SSBP3-206ENST00000420121 CNNM1Q9NRU3 951 aa13.93□□□□□ -0.18
SSBP3-206ENST00000420121 SMC4Q9NTJ3 1288 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms