RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 USP48Q86UV5 1035 aa12.02□□□□□ -0.49
NUP50-205ENST00000419387 CAPNS2Q96L46 248 aa12.02□□□□□ -0.49
NUP50-205ENST00000419387 WTIPA6NIX2 430 aaPredicted RBP12.01□□□□□ -0.49
NUP50-205ENST00000419387 EGFRP00533 1210 aa12.01□□□□□ -0.49
NUP50-205ENST00000419387 ITGA6P23229 1130 aa12.01□□□□□ -0.49
NUP50-205ENST00000419387 CTCFP49711 727 aaPredicted RBP12.01□□□□□ -0.49
NUP50-205ENST00000419387 CCT4P50991 539 aaKnown RBP12.01□□□□□ -0.49
NUP50-205ENST00000419387 BEND3Q5T5X7 828 aa12.01□□□□□ -0.49
NUP50-205ENST00000419387 CYP4F22Q6NT55 531 aa12.01□□□□□ -0.49
NUP50-205ENST00000419387 RSBN1LQ6PCB5 846 aaPredicted RBP12.01□□□□□ -0.49
NUP50-205ENST00000419387 SAPCD2Q86UD0 394 aa12.01□□□□□ -0.49
NUP50-205ENST00000419387 AGBL3Q8NEM8 1001 aa12.01□□□□□ -0.49
NUP50-205ENST00000419387 DCPSQ96C86 337 aaKnown RBP12.01□□□□□ -0.49
NUP50-205ENST00000419387 LEMD3Q9Y2U8 911 aa12.01□□□□□ -0.49
NUP50-205ENST00000419387 TRPM7Q96QT4 1865 aa12.01□□□□□ -0.49
NUP50-205ENST00000419387 CACNA1FO60840 1977 aa12.01□□□□□ -0.49
NUP50-205ENST00000419387 USP17L3A6NCW0 530 aa12□□□□□ -0.49
NUP50-205ENST00000419387 USP17L4A6NCW7 530 aa12□□□□□ -0.49
NUP50-205ENST00000419387 F6X3S4 739 aa12□□□□□ -0.49
NUP50-205ENST00000419387 GRM1Q13255 1194 aa12□□□□□ -0.49
NUP50-205ENST00000419387 KIF4BQ2VIQ3 1234 aa12□□□□□ -0.49
NUP50-205ENST00000419387 USP17L1Q7RTZ2 530 aa12□□□□□ -0.49
NUP50-205ENST00000419387 KRT26Q7Z3Y9 468 aa12□□□□□ -0.49
NUP50-205ENST00000419387 HHIPL1Q96JK4 782 aa12□□□□□ -0.49
NUP50-205ENST00000419387 MPHOSPH8Q99549 860 aa12□□□□□ -0.49
NUP50-205ENST00000419387 ANKRD2Q9GZV1 360 aa12□□□□□ -0.49
NUP50-205ENST00000419387 ZNF408Q9H9D4 720 aa12□□□□□ -0.49
NUP50-205ENST00000419387 PRDM10Q9NQV6 1147 aa12□□□□□ -0.49
NUP50-205ENST00000419387 ANKRD18BA2A2Z9 1011 aa11.99□□□□□ -0.49
NUP50-205ENST00000419387 ZNF280AP59817 542 aaPredicted RBP11.99□□□□□ -0.49
NUP50-205ENST00000419387 FAM161AQ3B820 660 aa11.99□□□□□ -0.49
NUP50-205ENST00000419387 DLK2Q6UY11 383 aa11.99□□□□□ -0.49
NUP50-205ENST00000419387 GMLQ99445 158 aa11.99□□□□□ -0.49
NUP50-205ENST00000419387 MED23Q9ULK4 1368 aa11.99□□□□□ -0.49
NUP50-205ENST00000419387 MYH3P11055 1940 aa11.99□□□□□ -0.49
NUP50-205ENST00000419387 SCN9AQ15858 1988 aa11.99□□□□□ -0.49
NUP50-205ENST00000419387 ZNF609O15014 1411 aa11.98□□□□□ -0.49
NUP50-205ENST00000419387 ZNF804BA4D1E1 1349 aa11.98□□□□□ -0.49
NUP50-205ENST00000419387 ZNF521Q96K83 1311 aa11.98□□□□□ -0.49
NUP50-205ENST00000419387 USP17L8P0C7I0 530 aa11.98□□□□□ -0.49
NUP50-205ENST00000419387 MAP2K2P36507 400 aa11.98□□□□□ -0.49
NUP50-205ENST00000419387 FOXO4P98177 505 aa11.98□□□□□ -0.49
NUP50-205ENST00000419387 COA1Q9GZY4 146 aa11.98□□□□□ -0.49
NUP50-205ENST00000419387 ADM5C9JUS6 153 aa11.97□□□□□ -0.49
NUP50-205ENST00000419387 AOC2O75106 756 aa11.97□□□□□ -0.49
NUP50-205ENST00000419387 LBX1P52954 281 aa11.97□□□□□ -0.49
NUP50-205ENST00000419387 CHRNDQ07001 517 aa11.97□□□□□ -0.49
NUP50-205ENST00000419387 IFIT5Q13325 482 aaKnown RBP11.97□□□□□ -0.49
NUP50-205ENST00000419387 SCARF1Q14162 830 aa11.97□□□□□ -0.49
NUP50-205ENST00000419387 TXNRD3Q86VQ6 643 aa11.97□□□□□ -0.49
NUP50-205ENST00000419387 SULF1Q8IWU6 871 aa11.97□□□□□ -0.49
NUP50-205ENST00000419387 BEGAINQ9BUH8 593 aa11.97□□□□□ -0.49
NUP50-205ENST00000419387 MYOZ2Q9NPC6 264 aa11.97□□□□□ -0.49
NUP50-205ENST00000419387 GRM8O00222 908 aa11.96□□□□□ -0.49
NUP50-205ENST00000419387 ALDH1L1O75891 902 aa11.96□□□□□ -0.49
NUP50-205ENST00000419387 HSPA8P11142 646 aaKnown RBP11.96□□□□□ -0.49
NUP50-205ENST00000419387 HUNKP57058 714 aa11.96□□□□□ -0.49
NUP50-205ENST00000419387 STRIP1Q5VSL9 837 aa11.96□□□□□ -0.49
NUP50-205ENST00000419387 SLC4A10Q6U841 1118 aa11.96□□□□□ -0.49
NUP50-205ENST00000419387 LMBR1LQ6UX01 489 aa11.96□□□□□ -0.49
NUP50-205ENST00000419387 C2orf69Q8N8R5 385 aa11.96□□□□□ -0.49
NUP50-205ENST00000419387 SRCIN1Q9C0H9 1055 aa11.96□□□□□ -0.49
NUP50-205ENST00000419387 GBA2Q9HCG7 927 aaPredicted RBP11.96□□□□□ -0.49
NUP50-205ENST00000419387 GGA3Q9NZ52 723 aa11.96□□□□□ -0.49
NUP50-205ENST00000419387 C9orf78Q9NZ63 289 aaPredicted RBP11.96□□□□□ -0.49
NUP50-205ENST00000419387 CHMP3Q9Y3E7 222 aa11.96□□□□□ -0.49
NUP50-205ENST00000419387 ASTN2O75129 1339 aaPredicted RBP11.95□□□□□ -0.5
NUP50-205ENST00000419387 MYO3BQ8WXR4 1341 aa11.95□□□□□ -0.5
NUP50-205ENST00000419387 KCNJ4P48050 445 aa11.95□□□□□ -0.5
NUP50-205ENST00000419387 EPHA10Q5JZY3 1008 aa11.95□□□□□ -0.5
NUP50-205ENST00000419387 DACT2Q5SW24 774 aa11.95□□□□□ -0.5
NUP50-205ENST00000419387 ANGEL2Q5VTE6 544 aaKnown RBP11.95□□□□□ -0.5
NUP50-205ENST00000419387 TTLL5Q6EMB2 1281 aa11.95□□□□□ -0.5
NUP50-205ENST00000419387 FBXW7Q969H0 707 aa11.95□□□□□ -0.5
NUP50-205ENST00000419387 MXD3Q9BW11 206 aa11.95□□□□□ -0.5
NUP50-205ENST00000419387 POLR2AP24928 1970 aaKnown RBP11.95□□□□□ -0.5
NUP50-205ENST00000419387 SPEF2Q9C093 1822 aa11.95□□□□□ -0.5
NUP50-205ENST00000419387 E9PSI1 815 aa11.94□□□□□ -0.5
NUP50-205ENST00000419387 TAF5LO75529 589 aa11.94□□□□□ -0.5
NUP50-205ENST00000419387 KLRK1P26718 216 aa11.94□□□□□ -0.5
NUP50-205ENST00000419387 MMP14P50281 582 aa11.94□□□□□ -0.5
NUP50-205ENST00000419387 CCDC57Q2TAC2 916 aa11.94□□□□□ -0.5
NUP50-205ENST00000419387 DIEXFQ68CQ4 756 aaKnown RBP11.94□□□□□ -0.5
NUP50-205ENST00000419387 OGFOD1Q8N543 542 aa11.94□□□□□ -0.5
NUP50-205ENST00000419387 MRPL50Q8N5N7 158 aaKnown RBP11.94□□□□□ -0.5
NUP50-205ENST00000419387 HELBQ8NG08 1087 aaPredicted RBP11.94□□□□□ -0.5
NUP50-205ENST00000419387 PSME4Q14997 1843 aa11.94□□□□□ -0.5
NUP50-205ENST00000419387 THSD7BQ9C0I4 1608 aa11.93□□□□□ -0.5
NUP50-205ENST00000419387 PITPNM2Q9BZ72 1349 aa11.93□□□□□ -0.5
NUP50-205ENST00000419387 SNAP23O00161 211 aa11.93□□□□□ -0.5
NUP50-205ENST00000419387 BRPF1P55201 1214 aaPredicted RBP11.93□□□□□ -0.5
NUP50-205ENST00000419387 GTF2IP78347 998 aa11.93□□□□□ -0.5
NUP50-205ENST00000419387 NOGQ13253 232 aa11.93□□□□□ -0.5
NUP50-205ENST00000419387 TAF7LQ5H9L4 462 aa11.93□□□□□ -0.5
NUP50-205ENST00000419387 RGMBQ6NW40 437 aa11.93□□□□□ -0.5
NUP50-205ENST00000419387 LDHAL6AQ6ZMR3 332 aa11.93□□□□□ -0.5
NUP50-205ENST00000419387 C15orf52Q6ZUT6 534 aaKnown RBP11.93□□□□□ -0.5
NUP50-205ENST00000419387 CDCA5Q96FF9 252 aa11.93□□□□□ -0.5
NUP50-205ENST00000419387 ZNF594Q96JF6 807 aaPredicted RBP11.93□□□□□ -0.5
NUP50-205ENST00000419387 CD209Q9NNX6 404 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms