RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 MVPQ14764 893 aaKnown RBP16.64■□□□□ 0.25
TMEM248-203ENST00000418375 CHMP4BQ9H444 224 aaKnown RBP16.64■□□□□ 0.25
TMEM248-203ENST00000418375 DDX19BQ9UMR2 479 aa16.64■□□□□ 0.25
TMEM248-203ENST00000418375 LEMD3Q9Y2U8 911 aa16.64■□□□□ 0.25
TMEM248-203ENST00000418375 YDJCA8MPS7 323 aa16.63■□□□□ 0.25
TMEM248-203ENST00000418375 KCNJ4P48050 445 aa16.63■□□□□ 0.25
TMEM248-203ENST00000418375 COG6Q9Y2V7 657 aa16.63■□□□□ 0.25
TMEM248-203ENST00000418375 DUOX1Q9NRD9 1551 aa16.63■□□□□ 0.25
TMEM248-203ENST00000418375 G3V3G9 751 aa16.62■□□□□ 0.25
TMEM248-203ENST00000418375 RIMBP2O15034 1052 aa16.62■□□□□ 0.25
TMEM248-203ENST00000418375 RFX5P48382 616 aaPredicted RBP16.62■□□□□ 0.25
TMEM248-203ENST00000418375 VEGFBP49765 207 aa16.62■□□□□ 0.25
TMEM248-203ENST00000418375 MTX1Q13505 466 aa16.62■□□□□ 0.25
TMEM248-203ENST00000418375 DCAF8Q5TAQ9 597 aa16.62■□□□□ 0.25
TMEM248-203ENST00000418375 MROH5Q6ZUA9 1318 aa16.62■□□□□ 0.25
TMEM248-203ENST00000418375 RASSF10A6NK89 507 aa16.61■□□□□ 0.25
TMEM248-203ENST00000418375 SRGAP3O43295 1099 aa16.61■□□□□ 0.25
TMEM248-203ENST00000418375 RRP1P56182 461 aaKnown RBP16.61■□□□□ 0.25
TMEM248-203ENST00000418375 PTPN12Q05209 780 aaKnown RBP16.61■□□□□ 0.25
TMEM248-203ENST00000418375 DEFB115Q30KQ5 88 aa16.61■□□□□ 0.25
TMEM248-203ENST00000418375 GPR101Q96P66 508 aaPredicted RBP16.61■□□□□ 0.25
TMEM248-203ENST00000418375 PUS3Q9BZE2 481 aaKnown RBP16.61■□□□□ 0.25
TMEM248-203ENST00000418375 DBNDD1Q9H9R9 158 aa16.61■□□□□ 0.25
TMEM248-203ENST00000418375 FBXO3Q9UK99 471 aa16.61■□□□□ 0.25
TMEM248-203ENST00000418375 ABT1Q9ULW3 272 aaKnown RBP16.61■□□□□ 0.25
TMEM248-203ENST00000418375 RIPOR2Q9Y4F9 1068 aa16.61■□□□□ 0.25
TMEM248-203ENST00000418375 ZNF804BA4D1E1 1349 aa16.61■□□□□ 0.25
TMEM248-203ENST00000418375 EYA2O00167 538 aa16.6■□□□□ 0.25
TMEM248-203ENST00000418375 FMR1Q06787 632 aaKnown RBP eCLIP16.6■□□□□ 0.25
TMEM248-203ENST00000418375 METTL24Q5JXM2 366 aa16.6■□□□□ 0.25
TMEM248-203ENST00000418375 HELBQ8NG08 1087 aaPredicted RBP16.6■□□□□ 0.25
TMEM248-203ENST00000418375 KLHDC4Q8TBB5 520 aa16.6■□□□□ 0.25
TMEM248-203ENST00000418375 CNOT7Q9UIV1 285 aaKnown RBP16.6■□□□□ 0.25
TMEM248-203ENST00000418375 MED23Q9ULK4 1368 aa16.6■□□□□ 0.25
TMEM248-203ENST00000418375 H7C1D1 291 aa16.59■□□□□ 0.25
TMEM248-203ENST00000418375 TRAF5O00463 557 aa16.59■□□□□ 0.25
TMEM248-203ENST00000418375 PSMD14O00487 310 aa16.59■□□□□ 0.25
TMEM248-203ENST00000418375 TAF5LO75529 589 aa16.59■□□□□ 0.25
TMEM248-203ENST00000418375 DOK7Q18PE1 504 aa16.59■□□□□ 0.25
TMEM248-203ENST00000418375 LRRC24Q50LG9 513 aa16.59■□□□□ 0.25
TMEM248-203ENST00000418375 C20orf194Q5TEA3 1177 aa16.59■□□□□ 0.25
TMEM248-203ENST00000418375 C1orf115Q9H7X2 142 aa16.59■□□□□ 0.25
TMEM248-203ENST00000418375 SPEF2Q9C093 1822 aa16.59■□□□□ 0.25
TMEM248-203ENST00000418375 ECE2O60344 883 aa16.58■□□□□ 0.24
TMEM248-203ENST00000418375 CIAO1O76071 339 aa16.58■□□□□ 0.24
TMEM248-203ENST00000418375 MICALL2Q8IY33 904 aa16.58■□□□□ 0.24
TMEM248-203ENST00000418375 TNS4Q8IZW8 715 aa16.58■□□□□ 0.24
TMEM248-203ENST00000418375 ZC3H15Q8WU90 426 aaKnown RBP16.58■□□□□ 0.24
TMEM248-203ENST00000418375 DPF2Q92785 391 aa16.58■□□□□ 0.24
TMEM248-203ENST00000418375 SIL1Q9H173 461 aa16.58■□□□□ 0.24
TMEM248-203ENST00000418375 COPRSQ9NQ92 184 aa16.58■□□□□ 0.24
TMEM248-203ENST00000418375 PGAP2Q9UHJ9 254 aa16.58■□□□□ 0.24
TMEM248-203ENST00000418375 ZBTB12Q9Y330 459 aaPredicted RBP16.58■□□□□ 0.24
TMEM248-203ENST00000418375 HIRAP54198 1017 aaPredicted RBP16.57■□□□□ 0.24
TMEM248-203ENST00000418375 ATP8B2P98198 1209 aa16.57■□□□□ 0.24
TMEM248-203ENST00000418375 UBE4AQ14139 1066 aa16.57■□□□□ 0.24
TMEM248-203ENST00000418375 CST9Q5W186 159 aa16.57■□□□□ 0.24
TMEM248-203ENST00000418375 TRPM4Q8TD43 1214 aa16.57■□□□□ 0.24
TMEM248-203ENST00000418375 AIDAQ96BJ3 306 aa16.57■□□□□ 0.24
TMEM248-203ENST00000418375 PA2G4Q9UQ80 394 aaKnown RBP16.57■□□□□ 0.24
TMEM248-203ENST00000418375 WDR33Q9C0J8 1336 aaKnown RBP16.56■□□□□ 0.24
TMEM248-203ENST00000418375 PNMA6EA0A0J9YXQ4 647 aa16.56■□□□□ 0.24
TMEM248-203ENST00000418375 SHTN1A0MZ66 631 aa16.56■□□□□ 0.24
TMEM248-203ENST00000418375 WTIPA6NIX2 430 aaPredicted RBP16.56■□□□□ 0.24
TMEM248-203ENST00000418375 FOXN1O15353 648 aa16.56■□□□□ 0.24
TMEM248-203ENST00000418375 PDE8BO95263 885 aa16.56■□□□□ 0.24
TMEM248-203ENST00000418375 RPS12P25398 132 aaKnown RBP16.56■□□□□ 0.24
TMEM248-203ENST00000418375 IL15P40933 162 aaPredicted RBP16.56■□□□□ 0.24
TMEM248-203ENST00000418375 C15orf52Q6ZUT6 534 aaKnown RBP16.56■□□□□ 0.24
TMEM248-203ENST00000418375 PODNQ7Z5L7 613 aa16.56■□□□□ 0.24
TMEM248-203ENST00000418375 GLIS2Q9BZE0 524 aaPredicted RBP16.56■□□□□ 0.24
TMEM248-203ENST00000418375 COA1Q9GZY4 146 aa16.56■□□□□ 0.24
TMEM248-203ENST00000418375 KCNQ5Q9NR82 932 aa16.56■□□□□ 0.24
TMEM248-203ENST00000418375 ZBTB40Q9NUA8 1239 aa16.56■□□□□ 0.24
TMEM248-203ENST00000418375 SNAP23O00161 211 aa16.55■□□□□ 0.24
TMEM248-203ENST00000418375 CEP85Q6P2H3 762 aa16.55■□□□□ 0.24
TMEM248-203ENST00000418375 PAXIP1Q6ZW49 1069 aaPredicted RBP16.55■□□□□ 0.24
TMEM248-203ENST00000418375 ATG9AQ7Z3C6 839 aa16.55■□□□□ 0.24
TMEM248-203ENST00000418375 CEP126Q9P2H0 1117 aa16.55■□□□□ 0.24
TMEM248-203ENST00000418375 CELF2O95319 508 aaKnown RBP16.54■□□□□ 0.24
TMEM248-203ENST00000418375 KLRK1P26718 216 aa16.54■□□□□ 0.24
TMEM248-203ENST00000418375 ECE1P42892 770 aa16.54■□□□□ 0.24
TMEM248-203ENST00000418375 POLA2Q14181 598 aa16.54■□□□□ 0.24
TMEM248-203ENST00000418375 PUM3Q15397 648 aaKnown RBP16.54■□□□□ 0.24
TMEM248-203ENST00000418375 CDC37L1Q7L3B6 337 aa16.54■□□□□ 0.24
TMEM248-203ENST00000418375 SAMD7Q7Z3H4 446 aa16.54■□□□□ 0.24
TMEM248-203ENST00000418375 ZNF804AQ7Z570 1209 aa16.54■□□□□ 0.24
TMEM248-203ENST00000418375 TXNRD3Q86VQ6 643 aa16.54■□□□□ 0.24
TMEM248-203ENST00000418375 VGLL2Q8N8G2 317 aa16.54■□□□□ 0.24
TMEM248-203ENST00000418375 SSH3Q8TE77 659 aa16.54■□□□□ 0.24
TMEM248-203ENST00000418375 WBP1LQ9NX94 342 aa16.54■□□□□ 0.24
TMEM248-203ENST00000418375 TLL2Q9Y6L7 1015 aa16.54■□□□□ 0.24
TMEM248-203ENST00000418375 VIL1P09327 827 aaKnown RBP16.53■□□□□ 0.24
TMEM248-203ENST00000418375 CTCFP49711 727 aaPredicted RBP16.53■□□□□ 0.24
TMEM248-203ENST00000418375 G3BP1Q13283 466 aaKnown RBP eCLIP16.53■□□□□ 0.24
TMEM248-203ENST00000418375 TBC1D10BQ4KMP7 808 aaPredicted RBP16.53■□□□□ 0.24
TMEM248-203ENST00000418375 RPAP2Q8IXW5 612 aaPredicted RBP16.53■□□□□ 0.24
TMEM248-203ENST00000418375 CAPNS2Q96L46 248 aa16.53■□□□□ 0.24
TMEM248-203ENST00000418375 IRS2Q9Y4H2 1338 aa16.52■□□□□ 0.24
TMEM248-203ENST00000418375 IFIT1P09914 478 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms