RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 TMEM102Q8N9M5 508 aaPredicted RBP8.13□□□□□ -1.11
RFC4-204ENST00000417876 MDFIQ99750 246 aa8.13□□□□□ -1.11
RFC4-204ENST00000417876 PBX4Q9BYU1 374 aa8.13□□□□□ -1.11
RFC4-204ENST00000417876 UBE2OQ9C0C9 1292 aaKnown RBP8.13□□□□□ -1.11
RFC4-204ENST00000417876 PPP4R2Q9NY27 417 aa8.13□□□□□ -1.11
RFC4-204ENST00000417876 NXF1Q9UBU9 619 aaKnown RBP8.13□□□□□ -1.11
RFC4-204ENST00000417876 GGT7Q9UJ14 662 aa8.13□□□□□ -1.11
RFC4-204ENST00000417876 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.13□□□□□ -1.11
RFC4-204ENST00000417876 SIN3BO75182 1162 aa8.12□□□□□ -1.11
RFC4-204ENST00000417876 FBXO24O75426 580 aa8.12□□□□□ -1.11
RFC4-204ENST00000417876 MX2P20592 715 aa8.12□□□□□ -1.11
RFC4-204ENST00000417876 NEUROD1Q13562 356 aa8.12□□□□□ -1.11
RFC4-204ENST00000417876 HS2ST1Q7LGA3 356 aa8.12□□□□□ -1.11
RFC4-204ENST00000417876 TNFRSF25Q93038 417 aa8.12□□□□□ -1.11
RFC4-204ENST00000417876 POP1Q99575 1024 aaKnown RBP8.12□□□□□ -1.11
RFC4-204ENST00000417876 TINF2Q9BSI4 451 aa8.12□□□□□ -1.11
RFC4-204ENST00000417876 BHLHE41Q9C0J9 482 aaPredicted RBP8.12□□□□□ -1.11
RFC4-204ENST00000417876 USP35Q9P2H5 1018 aa8.12□□□□□ -1.11
RFC4-204ENST00000417876 NAGPAQ9UK23 515 aa8.12□□□□□ -1.11
RFC4-204ENST00000417876 AKAP2Q9Y2D5 859 aa8.12□□□□□ -1.11
RFC4-204ENST00000417876 LOC105371045A0A1W2PR82 267 aa8.11□□□□□ -1.11
RFC4-204ENST00000417876 ITPKAP23677 461 aa8.11□□□□□ -1.11
RFC4-204ENST00000417876 DTHD1Q6ZMT9 781 aa8.11□□□□□ -1.11
RFC4-204ENST00000417876 USP48Q86UV5 1035 aa8.11□□□□□ -1.11
RFC4-204ENST00000417876 FCHSD1Q86WN1 690 aa8.11□□□□□ -1.11
RFC4-204ENST00000417876 SPACA7Q96KW9 195 aa8.11□□□□□ -1.11
RFC4-204ENST00000417876 TTF2Q9UNY4 1162 aaKnown RBP8.11□□□□□ -1.11
RFC4-204ENST00000417876 A0A096LPE4 126 aa8.1□□□□□ -1.11
RFC4-204ENST00000417876 A0A1W2PPZ6 126 aa8.1□□□□□ -1.11
RFC4-204ENST00000417876 F6X3S4 739 aa8.1□□□□□ -1.11
RFC4-204ENST00000417876 PDE2AO00408 941 aaPredicted RBP8.1□□□□□ -1.11
RFC4-204ENST00000417876 CPB1P15086 417 aa8.1□□□□□ -1.11
RFC4-204ENST00000417876 RNFT1Q5M7Z0 435 aa8.1□□□□□ -1.11
RFC4-204ENST00000417876 PERM1Q5SV97 790 aa8.1□□□□□ -1.11
RFC4-204ENST00000417876 MUC3BQ9H195 1237 aa8.1□□□□□ -1.11
RFC4-204ENST00000417876 SLC6A14Q9UN76 642 aa8.1□□□□□ -1.11
RFC4-204ENST00000417876 H3BM21 787 aa8.09□□□□□ -1.11
RFC4-204ENST00000417876 FAAP100Q0VG06 881 aa8.09□□□□□ -1.11
RFC4-204ENST00000417876 LCE2AQ5TA79 106 aaPredicted RBP8.09□□□□□ -1.11
RFC4-204ENST00000417876 TPTE2Q6XPS3 522 aa8.09□□□□□ -1.11
RFC4-204ENST00000417876 FAM35AQ86V20 835 aa8.09□□□□□ -1.11
RFC4-204ENST00000417876 ASAP3Q8TDY4 903 aa8.09□□□□□ -1.11
RFC4-204ENST00000417876 ANKRD24Q8TF21 1146 aa8.09□□□□□ -1.11
RFC4-204ENST00000417876 NOC4LQ9BVI4 516 aaKnown RBP8.09□□□□□ -1.11
RFC4-204ENST00000417876 CCSER2Q9H7U1 834 aa8.09□□□□□ -1.11
RFC4-204ENST00000417876 CAPN10Q9HC96 672 aa8.09□□□□□ -1.11
RFC4-204ENST00000417876 AVENQ9NQS1 362 aaPredicted RBP8.09□□□□□ -1.11
RFC4-204ENST00000417876 KBTBD4Q9NVX7 518 aa8.09□□□□□ -1.11
RFC4-204ENST00000417876 NEURL1BA8MQ27 555 aa8.08□□□□□ -1.12
RFC4-204ENST00000417876 ADARB2-AS1A8MUL3 147 aa8.08□□□□□ -1.12
RFC4-204ENST00000417876 GHRHP01286 108 aa8.08□□□□□ -1.12
RFC4-204ENST00000417876 ARAFP10398 606 aa8.08□□□□□ -1.12
RFC4-204ENST00000417876 XRCC5P13010 732 aaKnown RBP8.08□□□□□ -1.12
RFC4-204ENST00000417876 EIF2AK2P19525 551 aaKnown RBP8.08□□□□□ -1.12
RFC4-204ENST00000417876 CEP135Q66GS9 1140 aa8.08□□□□□ -1.12
RFC4-204ENST00000417876 ZNF654Q8IZM8 581 aa8.08□□□□□ -1.12
RFC4-204ENST00000417876 ZNF576Q9H609 170 aa8.08□□□□□ -1.12
RFC4-204ENST00000417876 SEC31BQ9NQW1 1179 aa8.08□□□□□ -1.12
RFC4-204ENST00000417876 PPM1HQ9ULR3 514 aa8.08□□□□□ -1.12
RFC4-204ENST00000417876 CELA3AP09093 270 aa8.07□□□□□ -1.12
RFC4-204ENST00000417876 ADH7P40394 386 aa8.07□□□□□ -1.12
RFC4-204ENST00000417876 CCDC85BQ15834 202 aaPredicted RBP8.07□□□□□ -1.12
RFC4-204ENST00000417876 PCSK7Q16549 785 aa8.07□□□□□ -1.12
RFC4-204ENST00000417876 SREK1Q8WXA9 508 aaKnown RBP8.07□□□□□ -1.12
RFC4-204ENST00000417876 PLD4Q96BZ4 506 aa8.07□□□□□ -1.12
RFC4-204ENST00000417876 LPIN3Q9BQK8 851 aa8.07□□□□□ -1.12
RFC4-204ENST00000417876 RSRP1Q9BUV0 290 aa8.07□□□□□ -1.12
RFC4-204ENST00000417876 MBIPQ9NS73 344 aa8.07□□□□□ -1.12
RFC4-204ENST00000417876 GGA1Q9UJY5 639 aa8.07□□□□□ -1.12
RFC4-204ENST00000417876 ERBB4Q15303 1308 aa8.06□□□□□ -1.12
RFC4-204ENST00000417876 ENC1O14682 589 aa8.06□□□□□ -1.12
RFC4-204ENST00000417876 VSIG8P0DPA2 414 aa8.06□□□□□ -1.12
RFC4-204ENST00000417876 ADH6P28332 368 aa8.06□□□□□ -1.12
RFC4-204ENST00000417876 KRT76Q01546 638 aa8.06□□□□□ -1.12
RFC4-204ENST00000417876 C1orf229Q6ZS94 237 aaPredicted RBP8.06□□□□□ -1.12
RFC4-204ENST00000417876 NECAB3Q96P71 396 aaPredicted RBP8.06□□□□□ -1.12
RFC4-204ENST00000417876 COL25A1Q9BXS0 654 aaPredicted RBP8.06□□□□□ -1.12
RFC4-204ENST00000417876 SMG9Q9H0W8 520 aaKnown RBP8.06□□□□□ -1.12
RFC4-204ENST00000417876 TRIM33Q9UPN9 1127 aa8.06□□□□□ -1.12
RFC4-204ENST00000417876 IGF1RP08069 1367 aa8.06□□□□□ -1.12
RFC4-204ENST00000417876 PAGE1O75459 146 aa8.05□□□□□ -1.12
RFC4-204ENST00000417876 ZNF157P51786 506 aaPredicted RBP8.05□□□□□ -1.12
RFC4-204ENST00000417876 MAP3K11Q16584 847 aa8.05□□□□□ -1.12
RFC4-204ENST00000417876 SV2BQ7L1I2 683 aa8.05□□□□□ -1.12
RFC4-204ENST00000417876 VN1R5Q7Z5H4 357 aa8.05□□□□□ -1.12
RFC4-204ENST00000417876 NPAS3Q8IXF0 933 aa8.05□□□□□ -1.12
RFC4-204ENST00000417876 SLC43A3Q8NBI5 491 aa8.05□□□□□ -1.12
RFC4-204ENST00000417876 DRC1Q96MC2 740 aa8.05□□□□□ -1.12
RFC4-204ENST00000417876 ADAMTS1Q9UHI8 967 aa8.05□□□□□ -1.12
RFC4-204ENST00000417876 TLR6Q9Y2C9 796 aa8.05□□□□□ -1.12
RFC4-204ENST00000417876 STARD13Q9Y3M8 1113 aa8.05□□□□□ -1.12
RFC4-204ENST00000417876 MINDY4BA8MYZ0 360 aa8.04□□□□□ -1.12
RFC4-204ENST00000417876 SMNDC1O75940 238 aaKnown RBP eCLIP8.04□□□□□ -1.12
RFC4-204ENST00000417876 MAP2K3P46734 347 aa8.04□□□□□ -1.12
RFC4-204ENST00000417876 ZNF423Q2M1K9 1284 aa8.04□□□□□ -1.12
RFC4-204ENST00000417876 ELMSAN1Q6PJG2 1045 aa8.04□□□□□ -1.12
RFC4-204ENST00000417876 TREML4Q6UXN2 200 aa8.04□□□□□ -1.12
RFC4-204ENST00000417876 BSNDQ8WZ55 320 aa8.04□□□□□ -1.12
RFC4-204ENST00000417876 SH2B1Q9NRF2 756 aaPredicted RBP8.04□□□□□ -1.12
RFC4-204ENST00000417876 SOX13Q9UN79 622 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms