RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 POLA2Q14181 598 aa28.66■■■□□ 2.18
SMARCB1-205ENST00000417137 RPAP2Q8IXW5 612 aaPredicted RBP28.66■■■□□ 2.18
SMARCB1-205ENST00000417137 YDJCA8MPS7 323 aa28.65■■■□□ 2.18
SMARCB1-205ENST00000417137 SNAP23O00161 211 aa28.65■■■□□ 2.18
SMARCB1-205ENST00000417137 RAD17O75943 681 aa28.65■■■□□ 2.18
SMARCB1-205ENST00000417137 G3BP1Q13283 466 aaKnown RBP eCLIP28.65■■■□□ 2.188e-6■□□□□ 9
SMARCB1-205ENST00000417137 CEP85Q6P2H3 762 aa28.65■■■□□ 2.18
SMARCB1-205ENST00000417137 VGLL2Q8N8G2 317 aa28.65■■■□□ 2.18
SMARCB1-205ENST00000417137 L3MBTL3Q96JM7 780 aaPredicted RBP28.65■■■□□ 2.18
SMARCB1-205ENST00000417137 NMRK2Q9NPI5 230 aa28.65■■■□□ 2.18
SMARCB1-205ENST00000417137 PUM3Q15397 648 aaKnown RBP28.64■■■□□ 2.18
SMARCB1-205ENST00000417137 ZNF804AQ7Z570 1209 aa28.64■■■□□ 2.18
SMARCB1-205ENST00000417137 TXNRD3Q86VQ6 643 aa28.64■■■□□ 2.18
SMARCB1-205ENST00000417137 IQCA1LA6NCM1 817 aa28.63■■■□□ 2.17
SMARCB1-205ENST00000417137 IFIT1P09914 478 aaKnown RBP28.62■■■□□ 2.17
SMARCB1-205ENST00000417137 KLRK1P26718 216 aa28.62■■■□□ 2.17
SMARCB1-205ENST00000417137 KIF3CO14782 793 aa28.61■■■□□ 2.17
SMARCB1-205ENST00000417137 HMMRO75330 724 aa28.61■■■□□ 2.17
SMARCB1-205ENST00000417137 LPIN2Q92539 896 aa28.61■■■□□ 2.17
SMARCB1-205ENST00000417137 SLC5A1P13866 664 aa28.6■■■□□ 2.17
SMARCB1-205ENST00000417137 LMOD1P29536 600 aaPredicted RBP28.6■■■□□ 2.17
SMARCB1-205ENST00000417137 CAVIN4Q5BKX8 364 aa28.6■■■□□ 2.17
SMARCB1-205ENST00000417137 C16orf71Q8IYS4 520 aaPredicted RBP28.6■■■□□ 2.17
SMARCB1-205ENST00000417137 CD209Q9NNX6 404 aa28.6■■■□□ 2.17
SMARCB1-205ENST00000417137 IRS2Q9Y4H2 1338 aa28.6■■■□□ 2.17
SMARCB1-205ENST00000417137 USP17L3A6NCW0 530 aa28.59■■■□□ 2.17
SMARCB1-205ENST00000417137 USP17L4A6NCW7 530 aa28.59■■■□□ 2.17
SMARCB1-205ENST00000417137 PSMD14O00487 310 aa28.59■■■□□ 2.17
SMARCB1-205ENST00000417137 SURF6O75683 361 aaKnown RBP28.59■■■□□ 2.17
SMARCB1-205ENST00000417137 HIBADHP31937 336 aaKnown RBP28.59■■■□□ 2.17
SMARCB1-205ENST00000417137 OS9Q13438 667 aaPredicted RBP28.59■■■□□ 2.17
SMARCB1-205ENST00000417137 USP17L1Q7RTZ2 530 aa28.59■■■□□ 2.17
SMARCB1-205ENST00000417137 VPS37DQ86XT2 251 aa28.59■■■□□ 2.17
SMARCB1-205ENST00000417137 KCNQ5Q9NR82 932 aa28.59■■■□□ 2.17
SMARCB1-205ENST00000417137 HACL1Q9UJ83 578 aa28.59■■■□□ 2.17
SMARCB1-205ENST00000417137 AKAP2Q9Y2D5 859 aa28.59■■■□□ 2.17
SMARCB1-205ENST00000417137 SUPT16HQ9Y5B9 1047 aaKnown RBP28.59■■■□□ 2.17
SMARCB1-205ENST00000417137 VIL1P09327 827 aaKnown RBP28.58■■■□□ 2.17
SMARCB1-205ENST00000417137 FGFR2P21802 821 aa28.58■■■□□ 2.17
SMARCB1-205ENST00000417137 NOP58Q9Y2X3 529 aaKnown RBP28.58■■■□□ 2.17
SMARCB1-205ENST00000417137 POTECB2RU33 542 aa28.57■■■□□ 2.16
SMARCB1-205ENST00000417137 RPS12P25398 132 aaKnown RBP28.57■■■□□ 2.16
SMARCB1-205ENST00000417137 ATP2B3Q16720 1220 aa28.57■■■□□ 2.16
SMARCB1-205ENST00000417137 FAM84BQ96KN1 310 aaPredicted RBP28.57■■■□□ 2.16
SMARCB1-205ENST00000417137 IL1R1P14778 569 aa28.56■■■□□ 2.16
SMARCB1-205ENST00000417137 TFCP2Q12800 502 aa28.56■■■□□ 2.16
SMARCB1-205ENST00000417137 STRIP1Q5VSL9 837 aa28.56■■■□□ 2.16
SMARCB1-205ENST00000417137 WDR90Q96KV7 1748 aa28.55■■■□□ 2.16
SMARCB1-205ENST00000417137 GYG1P46976 350 aa28.55■■■□□ 2.16
SMARCB1-205ENST00000417137 GMPSP49915 693 aaPredicted RBP28.55■■■□□ 2.16
SMARCB1-205ENST00000417137 HSP90AB4PQ58FF6 505 aa28.55■■■□□ 2.16
SMARCB1-205ENST00000417137 TTLL5Q6EMB2 1281 aa28.55■■■□□ 2.16
SMARCB1-205ENST00000417137 DPF2Q92785 391 aa28.55■■■□□ 2.16
SMARCB1-205ENST00000417137 FBXO33Q7Z6M2 555 aa28.54■■■□□ 2.16
SMARCB1-205ENST00000417137 FBXW7Q969H0 707 aa28.54■■■□□ 2.16
SMARCB1-205ENST00000417137 CRBNQ96SW2 442 aa28.54■■■□□ 2.16
SMARCB1-205ENST00000417137 GPRC5DQ9NZD1 345 aa28.54■■■□□ 2.16
SMARCB1-205ENST00000417137 SCNN1DP51172 638 aa28.53■■■□□ 2.16
SMARCB1-205ENST00000417137 RSBN1LQ6PCB5 846 aaPredicted RBP28.53■■■□□ 2.16
SMARCB1-205ENST00000417137 AGBL3Q8NEM8 1001 aa28.53■■■□□ 2.16
SMARCB1-205ENST00000417137 TAF1DQ9H5J8 278 aaPredicted RBP28.53■■■□□ 2.16
SMARCB1-205ENST00000417137 H7C1D1 291 aa28.52■■■□□ 2.16
SMARCB1-205ENST00000417137 TOMM70O94826 608 aa28.52■■■□□ 2.16
SMARCB1-205ENST00000417137 SASH1O94885 1247 aa28.52■■■□□ 2.16
SMARCB1-205ENST00000417137 EPHX2P34913 555 aa28.52■■■□□ 2.16
SMARCB1-205ENST00000417137 APLP1P51693 650 aa28.52■■■□□ 2.16
SMARCB1-205ENST00000417137 AAMPQ13685 434 aa28.52■■■□□ 2.16
SMARCB1-205ENST00000417137 PNMA8AQ86V59 439 aaPredicted RBP28.52■■■□□ 2.16
SMARCB1-205ENST00000417137 ERC1Q8IUD2 1116 aa28.52■■■□□ 2.16
SMARCB1-205ENST00000417137 TDRD7Q8NHU6 1098 aaKnown RBP28.52■■■□□ 2.16
SMARCB1-205ENST00000417137 ZBTB12Q9Y330 459 aaPredicted RBP28.52■■■□□ 2.16
SMARCB1-205ENST00000417137 FRAT2O75474 233 aaPredicted RBP28.51■■■□□ 2.15
SMARCB1-205ENST00000417137 GTF2IP78347 998 aa28.51■■■□□ 2.15
SMARCB1-205ENST00000417137 SIRT2Q8IXJ6 389 aa28.51■■■□□ 2.15
SMARCB1-205ENST00000417137 CNOT7Q9UIV1 285 aaKnown RBP28.51■■■□□ 2.15
SMARCB1-205ENST00000417137 A0A1B0GUL6 1792 aa28.51■■■□□ 2.15
SMARCB1-205ENST00000417137 MYO3BQ8WXR4 1341 aa28.5■■■□□ 2.15
SMARCB1-205ENST00000417137 EPS15P42566 896 aa28.5■■■□□ 2.15
SMARCB1-205ENST00000417137 BCAMP50895 628 aa28.5■■■□□ 2.15
SMARCB1-205ENST00000417137 GNL3LQ9NVN8 582 aaKnown RBP28.5■■■□□ 2.15
SMARCB1-205ENST00000417137 TIMM10P62072 90 aa28.49■■■□□ 2.15
SMARCB1-205ENST00000417137 DACT2Q5SW24 774 aa28.49■■■□□ 2.15
SMARCB1-205ENST00000417137 NEUROD6Q96NK8 337 aa28.49■■■□□ 2.15
SMARCB1-205ENST00000417137 GPR108Q9NPR9 543 aa28.49■■■□□ 2.15
SMARCB1-205ENST00000417137 A0A1B0GUL7 405 aa28.48■■■□□ 2.15
SMARCB1-205ENST00000417137 ADARB2Q9NS39 739 aaKnown RBP28.48■■■□□ 2.15
SMARCB1-205ENST00000417137 EXOC6BQ9Y2D4 811 aa28.48■■■□□ 2.15
SMARCB1-205ENST00000417137 MMP14P50281 582 aa28.47■■■□□ 2.15
SMARCB1-205ENST00000417137 USP50Q70EL3 339 aaPredicted RBP28.47■■■□□ 2.15
SMARCB1-205ENST00000417137 MICALL2Q8IY33 904 aa28.47■■■□□ 2.15
SMARCB1-205ENST00000417137 RBM46Q8TBY0 533 aaKnown RBP28.47■■■□□ 2.15
SMARCB1-205ENST00000417137 SCN4AP35499 1836 aa28.46■■■□□ 2.15
SMARCB1-205ENST00000417137 FKBP1AP62942 108 aaKnown RBP28.46■■■□□ 2.15
SMARCB1-205ENST00000417137 EAPPQ56P03 285 aaPredicted RBP28.46■■■□□ 2.15
SMARCB1-205ENST00000417137 FAM205AQ6ZU69 1335 aa28.45■■■□□ 2.15
SMARCB1-205ENST00000417137 RAB11FIP3O75154 756 aa28.45■■■□□ 2.14
SMARCB1-205ENST00000417137 USP17L8P0C7I0 530 aa28.45■■■□□ 2.14
SMARCB1-205ENST00000417137 GORABQ5T7V8 394 aa28.45■■■□□ 2.14
SMARCB1-205ENST00000417137 OGFOD1Q8N543 542 aa28.45■■■□□ 2.14
SMARCB1-205ENST00000417137 XAGE2Q96GT9 111 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 1038.2 ms