RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 POLR2AP24928 1970 aaKnown RBP27.79■■■□□ 2.04
ACTB-203ENST00000417101 SPEF2Q9C093 1822 aa27.79■■■□□ 2.04
ACTB-203ENST00000417101 USP17L8P0C7I0 530 aa27.79■■■□□ 2.04
ACTB-203ENST00000417101 GBA2Q9HCG7 927 aaPredicted RBP27.79■■■□□ 2.04
ACTB-203ENST00000417101 TSKSQ9UJT2 592 aa27.79■■■□□ 2.04
ACTB-203ENST00000417101 CSF1RP07333 972 aa27.78■■■□□ 2.04
ACTB-203ENST00000417101 SCARF1Q14162 830 aa27.78■■■□□ 2.04
ACTB-203ENST00000417101 C2orf69Q8N8R5 385 aa27.78■■■□□ 2.04
ACTB-203ENST00000417101 F6X3S4 739 aa27.77■■■□□ 2.04
ACTB-203ENST00000417101 BRPF1P55201 1214 aaPredicted RBP27.77■■■□□ 2.04
ACTB-203ENST00000417101 MPHOSPH8Q99549 860 aa27.77■■■□□ 2.04
ACTB-203ENST00000417101 MYOZ2Q9NPC6 264 aa27.77■■■□□ 2.04
ACTB-203ENST00000417101 LEMD3Q9Y2U8 911 aa27.77■■■□□ 2.04
ACTB-203ENST00000417101 NOGQ13253 232 aa27.76■■■□□ 2.03
ACTB-203ENST00000417101 ANGEL2Q5VTE6 544 aaKnown RBP27.76■■■□□ 2.03
ACTB-203ENST00000417101 TXNRD3Q86VQ6 643 aa27.76■■■□□ 2.03
ACTB-203ENST00000417101 ANKRD2Q9GZV1 360 aa27.76■■■□□ 2.03
ACTB-203ENST00000417101 PSME4Q14997 1843 aa27.76■■■□□ 2.03
ACTB-203ENST00000417101 FBXW7Q969H0 707 aa27.75■■■□□ 2.03
ACTB-203ENST00000417101 ZIC5Q96T25 663 aa27.75■■■□□ 2.03
ACTB-203ENST00000417101 COA1Q9GZY4 146 aa27.75■■■□□ 2.03
ACTB-203ENST00000417101 CACNA1FO60840 1977 aa27.75■■■□□ 2.03
ACTB-203ENST00000417101 ZNF804BA4D1E1 1349 aa27.74■■■□□ 2.03
ACTB-203ENST00000417101 DACT2Q5SW24 774 aa27.74■■■□□ 2.03
ACTB-203ENST00000417101 RGMBQ6NW40 437 aa27.74■■■□□ 2.03
ACTB-203ENST00000417101 CDCA5Q96FF9 252 aa27.74■■■□□ 2.03
ACTB-203ENST00000417101 MXD3Q9BW11 206 aa27.74■■■□□ 2.03
ACTB-203ENST00000417101 CA12O43570 354 aa27.73■■■□□ 2.03
ACTB-203ENST00000417101 KLRK1P26718 216 aa27.73■■■□□ 2.03
ACTB-203ENST00000417101 BEND3Q5T5X7 828 aa27.73■■■□□ 2.03
ACTB-203ENST00000417101 ANKRD18BA2A2Z9 1011 aa27.72■■■□□ 2.03
ACTB-203ENST00000417101 STRIP1Q5VSL9 837 aa27.72■■■□□ 2.03
ACTB-203ENST00000417101 KCNJ4P48050 445 aa27.71■■■□□ 2.03
ACTB-203ENST00000417101 FOXO4P98177 505 aa27.71■■■□□ 2.03
ACTB-203ENST00000417101 CHRNDQ07001 517 aa27.71■■■□□ 2.03
ACTB-203ENST00000417101 FAM155AB1AL88 458 aaPredicted RBP27.7■■■□□ 2.02
ACTB-203ENST00000417101 ZNF157P51786 506 aaPredicted RBP27.7■■■□□ 2.02
ACTB-203ENST00000417101 OGFOD1Q8N543 542 aa27.7■■■□□ 2.02
ACTB-203ENST00000417101 CHMP3Q9Y3E7 222 aa27.7■■■□□ 2.02
ACTB-203ENST00000417101 MYO3BQ8WXR4 1341 aa27.69■■■□□ 2.02
ACTB-203ENST00000417101 IFIT5Q13325 482 aaKnown RBP27.69■■■□□ 2.02
ACTB-203ENST00000417101 NBPF9Q3BBW0 867 aa27.69■■■□□ 2.02
ACTB-203ENST00000417101 CCDC102AQ96A19 550 aa27.69■■■□□ 2.02
ACTB-203ENST00000417101 SCAF8Q9UPN6 1271 aaKnown RBP27.69■■■□□ 2.02
ACTB-203ENST00000417101 PITPNM2Q9BZ72 1349 aa27.68■■■□□ 2.02
ACTB-203ENST00000417101 TTLL5Q6EMB2 1281 aa27.68■■■□□ 2.02
ACTB-203ENST00000417101 ABHD8Q96I13 439 aa27.68■■■□□ 2.02
ACTB-203ENST00000417101 SNAP23O00161 211 aa27.66■■■□□ 2.02
ACTB-203ENST00000417101 GRM8O00222 908 aa27.66■■■□□ 2.02
ACTB-203ENST00000417101 TAF5LO75529 589 aa27.66■■■□□ 2.02
ACTB-203ENST00000417101 LMBR1LQ6UX01 489 aa27.66■■■□□ 2.02
ACTB-203ENST00000417101 HELBQ8NG08 1087 aaPredicted RBP27.66■■■□□ 2.02
ACTB-203ENST00000417101 GTF2IP78347 998 aa27.65■■■□□ 2.02
ACTB-203ENST00000417101 KIF23Q02241 960 aaPredicted RBP27.65■■■□□ 2.02
ACTB-203ENST00000417101 EPHA10Q5JZY3 1008 aa27.65■■■□□ 2.02
ACTB-203ENST00000417101 SLC4A10Q6U841 1118 aa27.65■■■□□ 2.02
ACTB-203ENST00000417101 WNT10BO00744 389 aa27.64■■■□□ 2.02
ACTB-203ENST00000417101 C9orf78Q9NZ63 289 aaPredicted RBP27.64■■■□□ 2.02
ACTB-203ENST00000417101 ZNF646O15015 1829 aaPredicted RBP27.63■■■□□ 2.01
ACTB-203ENST00000417101 SLC10A3P09131 477 aa27.63■■■□□ 2.01
ACTB-203ENST00000417101 PRAMEF18Q5VWM3 479 aa27.63■■■□□ 2.01
ACTB-203ENST00000417101 KIAA0825Q8IV33 1275 aa27.63■■■□□ 2.01
ACTB-203ENST00000417101 CD209Q9NNX6 404 aa27.63■■■□□ 2.01
ACTB-203ENST00000417101 SASH1O94885 1247 aa27.62■■■□□ 2.01
ACTB-203ENST00000417101 FKBP1BP68106 108 aa27.62■■■□□ 2.01
ACTB-203ENST00000417101 CCDC57Q2TAC2 916 aa27.62■■■□□ 2.01
ACTB-203ENST00000417101 ZNF594Q96JF6 807 aaPredicted RBP27.62■■■□□ 2.01
ACTB-203ENST00000417101 SRCIN1Q9C0H9 1055 aa27.62■■■□□ 2.01
ACTB-203ENST00000417101 ZNF521Q96K83 1311 aa27.62■■■□□ 2.01
ACTB-203ENST00000417101 ALDH1L1O75891 902 aa27.61■■■□□ 2.01
ACTB-203ENST00000417101 MMP14P50281 582 aa27.61■■■□□ 2.01
ACTB-203ENST00000417101 TAF7LQ5H9L4 462 aa27.61■■■□□ 2.01
ACTB-203ENST00000417101 HDAC9Q9UKV0 1011 aa27.61■■■□□ 2.01
ACTB-203ENST00000417101 IRS2Q9Y4H2 1338 aa27.61■■■□□ 2.01
ACTB-203ENST00000417101 C15orf52Q6ZUT6 534 aaKnown RBP27.6■■■□□ 2.01
ACTB-203ENST00000417101 MOB2Q70IA6 237 aa27.6■■■□□ 2.01
ACTB-203ENST00000417101 LDHAL6AQ6ZMR3 332 aa27.59■■■□□ 2.01
ACTB-203ENST00000417101 RASAL3Q86YV0 1011 aa27.59■■■□□ 2.01
ACTB-203ENST00000417101 CNNM1Q9NRU3 951 aa27.59■■■□□ 2.01
ACTB-203ENST00000417101 CASP8AP2Q9UKL3 1982 aa27.59■■■□□ 2.01
ACTB-203ENST00000417101 PAPPA2Q9BXP8 1791 aa27.58■■■□□ 2.01
ACTB-203ENST00000417101 PLIN1O60240 522 aa27.58■■■□□ 2.01
ACTB-203ENST00000417101 CSRNP1Q96S65 589 aa27.58■■■□□ 2.01
ACTB-203ENST00000417101 UBE2Q2LH0YL09 131 aa27.57■■■□□ 2
ACTB-203ENST00000417101 ZNF804AQ7Z570 1209 aa27.57■■■□□ 2
ACTB-203ENST00000417101 SAGE1Q9NXZ1 904 aa27.57■■■□□ 2
ACTB-203ENST00000417101 TRPA1O75762 1119 aa27.56■■■□□ 2
ACTB-203ENST00000417101 TTLL12Q14166 644 aaPredicted RBP27.56■■■□□ 2
ACTB-203ENST00000417101 CERS5Q8N5B7 392 aa27.56■■■□□ 2
ACTB-203ENST00000417101 SUCLG2Q96I99 432 aa27.56■■■□□ 2
ACTB-203ENST00000417101 MCOLN1Q9GZU1 580 aa27.56■■■□□ 2
ACTB-203ENST00000417101 RNF186Q9NXI6 227 aa27.56■■■□□ 2
ACTB-203ENST00000417101 CCDC85CA6NKD9 419 aa27.55■■■□□ 2
ACTB-203ENST00000417101 APOBEC3FQ8IUX4 373 aaKnown RBP27.55■■■□□ 2
ACTB-203ENST00000417101 ZBED3Q96IU2 234 aaPredicted RBP27.55■■■□□ 2
ACTB-203ENST00000417101 IL1R1P14778 569 aa27.54■■■□□ 2
ACTB-203ENST00000417101 NF2P35240 595 aa27.54■■■□□ 2
ACTB-203ENST00000417101 KAZALD1Q96I82 304 aa27.54■■■□□ 2
ACTB-203ENST00000417101 NBPF7P0C2Y1 421 aaPredicted RBP27.53■■■□□ 2
ACTB-203ENST00000417101 DGKZQ13574 1117 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms