RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 NGLY1Q96IV0 654 aa18.32■□□□□ 0.52
LRCH3-202ENST00000414675 HSPA1LP34931 641 aa18.32■□□□□ 0.52
LRCH3-202ENST00000414675 KCNQ4P56696 695 aa18.32■□□□□ 0.52
LRCH3-202ENST00000414675 PDE8BO95263 885 aa18.31■□□□□ 0.52
LRCH3-202ENST00000414675 ANKRD1Q15327 319 aa18.31■□□□□ 0.52
LRCH3-202ENST00000414675 VPS72Q15906 364 aa18.31■□□□□ 0.52
LRCH3-202ENST00000414675 HELBQ8NG08 1087 aaPredicted RBP18.31■□□□□ 0.52
LRCH3-202ENST00000414675 UTP14AQ9BVJ6 771 aaKnown RBP18.31■□□□□ 0.52
LRCH3-202ENST00000414675 ISY1Q9ULR0 285 aaKnown RBP18.31■□□□□ 0.52
LRCH3-202ENST00000414675 FOXP2O15409 715 aa18.3■□□□□ 0.52
LRCH3-202ENST00000414675 SMARCC1Q92922 1105 aaPredicted RBP18.3■□□□□ 0.52
LRCH3-202ENST00000414675 SEC31BQ9NQW1 1179 aa18.3■□□□□ 0.52
LRCH3-202ENST00000414675 MTMR6Q9Y217 621 aa18.3■□□□□ 0.52
LRCH3-202ENST00000414675 NTSR2O95665 410 aa18.3■□□□□ 0.52
LRCH3-202ENST00000414675 ZSCAN23Q3MJ62 389 aa18.3■□□□□ 0.52
LRCH3-202ENST00000414675 LINC00116Q8NCU8 138 aa18.3■□□□□ 0.52
LRCH3-202ENST00000414675 LRRC2Q9BYS8 371 aa18.3■□□□□ 0.52
LRCH3-202ENST00000414675 NIP7Q9Y221 180 aaKnown RBP eCLIP18.3■□□□□ 0.52
LRCH3-202ENST00000414675 ABCC12Q96J65 1359 aa18.3■□□□□ 0.52
LRCH3-202ENST00000414675 F13A1P00488 732 aa18.29■□□□□ 0.52
LRCH3-202ENST00000414675 STK3Q13188 491 aa18.29■□□□□ 0.52
LRCH3-202ENST00000414675 TTLL5Q6EMB2 1281 aa18.29■□□□□ 0.52
LRCH3-202ENST00000414675 BCORQ6W2J9 1755 aa18.29■□□□□ 0.52
LRCH3-202ENST00000414675 Q6ZUG5 572 aa18.29■□□□□ 0.52
LRCH3-202ENST00000414675 TMEM63CQ9P1W3 806 aa18.29■□□□□ 0.52
LRCH3-202ENST00000414675 GADD45BO75293 160 aaPredicted RBP18.29■□□□□ 0.52
LRCH3-202ENST00000414675 PHKA1P46020 1223 aa18.29■□□□□ 0.52
LRCH3-202ENST00000414675 AK7Q96M32 723 aa18.29■□□□□ 0.52
LRCH3-202ENST00000414675 SNAP23O00161 211 aa18.28■□□□□ 0.52
LRCH3-202ENST00000414675 WASHC4Q2M389 1173 aa18.28■□□□□ 0.52
LRCH3-202ENST00000414675 PARP10Q53GL7 1025 aa18.28■□□□□ 0.52
LRCH3-202ENST00000414675 USP48Q86UV5 1035 aa18.28■□□□□ 0.52
LRCH3-202ENST00000414675 FAM43AQ8N2R8 423 aa18.28■□□□□ 0.52
LRCH3-202ENST00000414675 CNPY2Q9Y2B0 182 aa18.28■□□□□ 0.52
LRCH3-202ENST00000414675 ARAP2Q8WZ64 1704 aa18.28■□□□□ 0.52
LRCH3-202ENST00000414675 COL4A1P02462 1669 aa18.28■□□□□ 0.52
LRCH3-202ENST00000414675 LAMB2P55268 1798 aa18.28■□□□□ 0.52
LRCH3-202ENST00000414675 SPATA31A6Q5VVP1 1343 aa18.28■□□□□ 0.52
LRCH3-202ENST00000414675 FGFR2P21802 821 aa18.28■□□□□ 0.52
LRCH3-202ENST00000414675 ZNF445P59923 1031 aa18.28■□□□□ 0.52
LRCH3-202ENST00000414675 SMIM5Q71RC9 77 aa18.28■□□□□ 0.52
LRCH3-202ENST00000414675 PUS7LQ9H0K6 701 aaKnown RBP18.28■□□□□ 0.52
LRCH3-202ENST00000414675 ZNF831Q5JPB2 1677 aa18.28■□□□□ 0.52
LRCH3-202ENST00000414675 ZFYP08048 801 aaPredicted RBP18.27■□□□□ 0.52
LRCH3-202ENST00000414675 CCDC102BQ68D86 513 aa18.27■□□□□ 0.52
LRCH3-202ENST00000414675 ZNF512BQ96KM6 892 aaPredicted RBP18.27■□□□□ 0.52
LRCH3-202ENST00000414675 E7EWF7 191 aa18.26■□□□□ 0.51
LRCH3-202ENST00000414675 PIH1D3Q9NQM4 214 aaKnown RBP18.26■□□□□ 0.51
LRCH3-202ENST00000414675 MROH5Q6ZUA9 1318 aa18.26■□□□□ 0.51
LRCH3-202ENST00000414675 PUM3Q15397 648 aaKnown RBP18.26■□□□□ 0.51
LRCH3-202ENST00000414675 APPBP2Q92624 585 aa18.26■□□□□ 0.51
LRCH3-202ENST00000414675 VPS37CA5D8V6 355 aaPredicted RBP18.25■□□□□ 0.51
LRCH3-202ENST00000414675 LRRFIP1Q32MZ4 808 aaKnown RBP18.25■□□□□ 0.51
LRCH3-202ENST00000414675 FNBP4Q8N3X1 1017 aaPredicted RBP18.25■□□□□ 0.51
LRCH3-202ENST00000414675 BRF1Q92994 677 aa18.25■□□□□ 0.51
LRCH3-202ENST00000414675 MBD3O95983 291 aa18.25■□□□□ 0.51
LRCH3-202ENST00000414675 ARID4AP29374 1257 aaPredicted RBP18.25■□□□□ 0.51
LRCH3-202ENST00000414675 EXOSC10Q01780 885 aaKnown RBP18.25■□□□□ 0.51
LRCH3-202ENST00000414675 DHX32Q7L7V1 743 aaKnown RBP18.25■□□□□ 0.51
LRCH3-202ENST00000414675 TMEM87AQ8NBN3 555 aa18.25■□□□□ 0.51
LRCH3-202ENST00000414675 LPIN2Q92539 896 aa18.25■□□□□ 0.51
LRCH3-202ENST00000414675 GTF3C6Q969F1 213 aa18.25■□□□□ 0.51
LRCH3-202ENST00000414675 JAK2O60674 1132 aa18.24■□□□□ 0.51
LRCH3-202ENST00000414675 ADD2P35612 726 aa18.24■□□□□ 0.51
LRCH3-202ENST00000414675 LARP1BQ659C4 914 aaKnown RBP18.24■□□□□ 0.51
LRCH3-202ENST00000414675 CDC37L1Q7L3B6 337 aa18.24■□□□□ 0.51
LRCH3-202ENST00000414675 MPHOSPH8Q99549 860 aa18.24■□□□□ 0.51
LRCH3-202ENST00000414675 BTAF1O14981 1849 aa18.23■□□□□ 0.51
LRCH3-202ENST00000414675 TAF1P21675 1872 aa18.23■□□□□ 0.51
LRCH3-202ENST00000414675 GPAA1O43292 621 aa18.23■□□□□ 0.51
LRCH3-202ENST00000414675 HSP90B1P14625 803 aaKnown RBP18.23■□□□□ 0.51
LRCH3-202ENST00000414675 HAND2P61296 217 aa18.23■□□□□ 0.51
LRCH3-202ENST00000414675 CCDC152Q4G0S7 254 aa18.23■□□□□ 0.51
LRCH3-202ENST00000414675 FAM182BQ5T319 152 aa18.23■□□□□ 0.51
LRCH3-202ENST00000414675 CASZ1Q86V15 1759 aa18.23■□□□□ 0.51
LRCH3-202ENST00000414675 FGAP02671 866 aa18.23■□□□□ 0.51
LRCH3-202ENST00000414675 HMGB1P09429 215 aaKnown RBP18.23■□□□□ 0.51
LRCH3-202ENST00000414675 DNM1Q05193 864 aaKnown RBP18.23■□□□□ 0.51
LRCH3-202ENST00000414675 C3orf67Q6ZVT6 689 aa18.23■□□□□ 0.51
LRCH3-202ENST00000414675 CHST3Q7LGC8 479 aa18.23■□□□□ 0.51
LRCH3-202ENST00000414675 RTL9Q8NET4 1388 aa18.23■□□□□ 0.51
LRCH3-202ENST00000414675 SLC9C2Q5TAH2 1124 aa18.22■□□□□ 0.51
LRCH3-202ENST00000414675 USP21Q9UK80 565 aa18.22■□□□□ 0.51
LRCH3-202ENST00000414675 ZNF652Q9Y2D9 606 aa18.22■□□□□ 0.51
LRCH3-202ENST00000414675 THSD7AQ9UPZ6 1657 aa18.22■□□□□ 0.51
LRCH3-202ENST00000414675 FIBPO43427 364 aa18.21■□□□□ 0.51
LRCH3-202ENST00000414675 IDH1O75874 414 aaKnown RBP18.21■□□□□ 0.51
LRCH3-202ENST00000414675 APOBRQ0VD83 1088 aa18.21■□□□□ 0.51
LRCH3-202ENST00000414675 SCRN1Q12765 414 aa18.21■□□□□ 0.51
LRCH3-202ENST00000414675 AGXT2Q9BYV1 514 aa18.21■□□□□ 0.51
LRCH3-202ENST00000414675 WWC3Q9ULE0 1092 aa18.21■□□□□ 0.51
LRCH3-202ENST00000414675 SYCE3A1L190 88 aa18.21■□□□□ 0.51
LRCH3-202ENST00000414675 UQCRFS1P1P0C7P4 283 aa18.21■□□□□ 0.51
LRCH3-202ENST00000414675 SLC5A1P13866 664 aa18.21■□□□□ 0.51
LRCH3-202ENST00000414675 ERFEQ4G0M1 354 aa18.21■□□□□ 0.51
LRCH3-202ENST00000414675 CLEC4GQ6UXB4 293 aa18.21■□□□□ 0.51
LRCH3-202ENST00000414675 FERMT3Q86UX7 667 aa18.21■□□□□ 0.51
LRCH3-202ENST00000414675 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.21■□□□□ 0.516e-7■■■□□ 15
LRCH3-202ENST00000414675 CNTNAP4Q9C0A0 1308 aa18.21■□□□□ 0.51
LRCH3-202ENST00000414675 FGD1P98174 961 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms