RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 PUS3Q9BZE2 481 aaKnown RBP33.17■■■□□ 2.9
VEGFA-207ENST00000413642 USP17L3A6NCW0 530 aa33.16■■■□□ 2.9
VEGFA-207ENST00000413642 USP17L4A6NCW7 530 aa33.16■■■□□ 2.9
VEGFA-207ENST00000413642 PLIN1O60240 522 aa33.16■■■□□ 2.9
VEGFA-207ENST00000413642 USP17L1Q7RTZ2 530 aa33.16■■■□□ 2.9
VEGFA-207ENST00000413642 COA1Q9GZY4 146 aa33.16■■■□□ 2.9
VEGFA-207ENST00000413642 CNNM1Q9NRU3 951 aa33.16■■■□□ 2.9
VEGFA-207ENST00000413642 BRPF1P55201 1214 aaPredicted RBP33.15■■■□□ 2.9
VEGFA-207ENST00000413642 RABL6Q3YEC7 729 aaPredicted RBP33.15■■■□□ 2.9
VEGFA-207ENST00000413642 IRS2Q9Y4H2 1338 aa33.14■■■□□ 2.9
VEGFA-207ENST00000413642 DLK2Q6UY11 383 aa33.14■■■□□ 2.9
VEGFA-207ENST00000413642 FBXW7Q969H0 707 aa33.14■■■□□ 2.9
VEGFA-207ENST00000413642 GMLQ99445 158 aa33.14■■■□□ 2.9
VEGFA-207ENST00000413642 AGBL3Q8NEM8 1001 aa33.13■■■□□ 2.89
VEGFA-207ENST00000413642 ZC3H15Q8WU90 426 aaKnown RBP33.13■■■□□ 2.89
VEGFA-207ENST00000413642 CST9Q5W186 159 aa33.12■■■□□ 2.89
VEGFA-207ENST00000413642 API5Q9BZZ5 524 aaKnown RBP33.12■■■□□ 2.89
VEGFA-207ENST00000413642 KIF4BQ2VIQ3 1234 aa33.11■■■□□ 2.89
VEGFA-207ENST00000413642 DACT2Q5SW24 774 aa33.11■■■□□ 2.89
VEGFA-207ENST00000413642 ASTN2O75129 1339 aaPredicted RBP33.1■■■□□ 2.89
VEGFA-207ENST00000413642 USP48Q86UV5 1035 aa33.1■■■□□ 2.89
VEGFA-207ENST00000413642 CNTNAP1P78357 1384 aa33.09■■■□□ 2.89
VEGFA-207ENST00000413642 ZNF280AP59817 542 aaPredicted RBP33.09■■■□□ 2.89
VEGFA-207ENST00000413642 KLHDC4Q8TBB5 520 aa33.09■■■□□ 2.89
VEGFA-207ENST00000413642 CD209Q9NNX6 404 aa33.09■■■□□ 2.89
VEGFA-207ENST00000413642 BCAR3O75815 825 aa33.08■■■□□ 2.89
VEGFA-207ENST00000413642 USP17L8P0C7I0 530 aa33.08■■■□□ 2.89
VEGFA-207ENST00000413642 CDC37L1Q7L3B6 337 aa33.08■■■□□ 2.89
VEGFA-207ENST00000413642 ABT1Q9ULW3 272 aaKnown RBP33.08■■■□□ 2.89
VEGFA-207ENST00000413642 LRRC24Q50LG9 513 aa33.07■■■□□ 2.88
VEGFA-207ENST00000413642 STRIP1Q5VSL9 837 aa33.07■■■□□ 2.88
VEGFA-207ENST00000413642 C15orf52Q6ZUT6 534 aaKnown RBP33.07■■■□□ 2.88
VEGFA-207ENST00000413642 TNNQ9UQP3 1299 aa33.07■■■□□ 2.88
VEGFA-207ENST00000413642 RIPOR2Q9Y4F9 1068 aa33.07■■■□□ 2.88
VEGFA-207ENST00000413642 ZNF609O15014 1411 aa33.07■■■□□ 2.88
VEGFA-207ENST00000413642 VEGFBP49765 207 aa33.06■■■□□ 2.88
VEGFA-207ENST00000413642 GTF2IP78347 998 aa33.06■■■□□ 2.88
VEGFA-207ENST00000413642 CELF2O95319 508 aaKnown RBP33.05■■■□□ 2.88
VEGFA-207ENST00000413642 TTLL5Q6EMB2 1281 aa33.05■■■□□ 2.88
VEGFA-207ENST00000413642 ZNF408Q9H9D4 720 aa33.04■■■□□ 2.88
VEGFA-207ENST00000413642 KIF16BQ96L93 1317 aa33.03■■■□□ 2.88
VEGFA-207ENST00000413642 RASSF10A6NK89 507 aa33.03■■■□□ 2.88
VEGFA-207ENST00000413642 ADM5C9JUS6 153 aa33.03■■■□□ 2.88
VEGFA-207ENST00000413642 SCARF1Q14162 830 aa33.03■■■□□ 2.88
VEGFA-207ENST00000413642 DEFB115Q30KQ5 88 aa33.03■■■□□ 2.88
VEGFA-207ENST00000413642 MYOZ2Q9NPC6 264 aa33.03■■■□□ 2.88
VEGFA-207ENST00000413642 UBTFL1P0CB47 393 aaPredicted RBP33.02■■■□□ 2.88
VEGFA-207ENST00000413642 KRT26Q7Z3Y9 468 aa33.02■■■□□ 2.88
VEGFA-207ENST00000413642 ARHGAP45Q92619 1136 aa33.02■■■□□ 2.88
VEGFA-207ENST00000413642 DCPSQ96C86 337 aaKnown RBP33.02■■■□□ 2.88
VEGFA-207ENST00000413642 GGA3Q9NZ52 723 aa33.02■■■□□ 2.88
VEGFA-207ENST00000413642 RFX5P48382 616 aaPredicted RBP33.01■■■□□ 2.87
VEGFA-207ENST00000413642 FRAT1Q92837 279 aaPredicted RBP33.01■■■□□ 2.87
VEGFA-207ENST00000413642 ZNF804AQ7Z570 1209 aa33■■■□□ 2.87
VEGFA-207ENST00000413642 MEIS3Q99687 375 aa33■■■□□ 2.87
VEGFA-207ENST00000413642 JAG2Q9Y219 1238 aa33■■■□□ 2.87
VEGFA-207ENST00000413642 MROH5Q6ZUA9 1318 aa33■■■□□ 2.87
VEGFA-207ENST00000413642 A0A1B0GUL6 1792 aa32.99■■■□□ 2.87
VEGFA-207ENST00000413642 GYG1P46976 350 aa32.99■■■□□ 2.87
VEGFA-207ENST00000413642 UBE4AQ14139 1066 aa32.99■■■□□ 2.87
VEGFA-207ENST00000413642 ANGEL2Q5VTE6 544 aaKnown RBP32.99■■■□□ 2.87
VEGFA-207ENST00000413642 KIAA0825Q8IV33 1275 aa32.99■■■□□ 2.87
VEGFA-207ENST00000413642 LRRFIP2Q9Y608 721 aaKnown RBP32.99■■■□□ 2.87
VEGFA-207ENST00000413642 PSME4Q14997 1843 aa32.99■■■□□ 2.87
VEGFA-207ENST00000413642 HSPA1AP0DMV8 641 aaKnown RBP32.98■■■□□ 2.87
VEGFA-207ENST00000413642 HSPA1BP0DMV9 641 aaKnown RBP32.98■■■□□ 2.87
VEGFA-207ENST00000413642 TRIM27P14373 513 aa32.98■■■□□ 2.87
VEGFA-207ENST00000413642 IL1R1P14778 569 aa32.98■■■□□ 2.87
VEGFA-207ENST00000413642 METTL24Q5JXM2 366 aa32.98■■■□□ 2.87
VEGFA-207ENST00000413642 INTS3Q68E01 1043 aaKnown RBP32.98■■■□□ 2.87
VEGFA-207ENST00000413642 CERS5Q8N5B7 392 aa32.98■■■□□ 2.87
VEGFA-207ENST00000413642 SCAF8Q9UPN6 1271 aaKnown RBP32.98■■■□□ 2.87
VEGFA-207ENST00000413642 TLL2Q9Y6L7 1015 aa32.98■■■□□ 2.87
VEGFA-207ENST00000413642 MYO3BQ8WXR4 1341 aa32.98■■■□□ 2.87
VEGFA-207ENST00000413642 NBPF9Q3BBW0 867 aa32.97■■■□□ 2.87
VEGFA-207ENST00000413642 ZNF646O15015 1829 aaPredicted RBP32.96■■■□□ 2.87
VEGFA-207ENST00000413642 CLUAP1Q96AJ1 413 aa32.96■■■□□ 2.87
VEGFA-207ENST00000413642 FAM84BQ96KN1 310 aaPredicted RBP32.96■■■□□ 2.87
VEGFA-207ENST00000413642 PTPN12Q05209 780 aaKnown RBP32.95■■■□□ 2.87
VEGFA-207ENST00000413642 PAXIP1Q6ZW49 1069 aaPredicted RBP32.95■■■□□ 2.87
VEGFA-207ENST00000413642 OGFOD1Q8N543 542 aa32.95■■■□□ 2.87
VEGFA-207ENST00000413642 VGLL2Q8N8G2 317 aa32.95■■■□□ 2.87
VEGFA-207ENST00000413642 ZBED9Q6R2W3 1325 aa32.95■■■□□ 2.86
VEGFA-207ENST00000413642 IPO8O15397 1037 aaKnown RBP32.94■■■□□ 2.86
VEGFA-207ENST00000413642 GRM1Q13255 1194 aa32.94■■■□□ 2.86
VEGFA-207ENST00000413642 CYP4F22Q6NT55 531 aa32.94■■■□□ 2.86
VEGFA-207ENST00000413642 ATF7IPQ6VMQ6 1270 aa32.94■■■□□ 2.86
VEGFA-207ENST00000413642 SAPCD2Q86UD0 394 aa32.94■■■□□ 2.86
VEGFA-207ENST00000413642 SULF1Q8IWU6 871 aa32.94■■■□□ 2.86
VEGFA-207ENST00000413642 WDR33Q9C0J8 1336 aaKnown RBP32.94■■■□□ 2.86
VEGFA-207ENST00000413642 HIBADHP31937 336 aaKnown RBP32.93■■■□□ 2.86
VEGFA-207ENST00000413642 EYA2O00167 538 aa32.92■■■□□ 2.86
VEGFA-207ENST00000413642 SASH1O94885 1247 aa32.92■■■□□ 2.86
VEGFA-207ENST00000413642 PDE8BO95263 885 aa32.92■■■□□ 2.86
VEGFA-207ENST00000413642 TDRD7Q8NHU6 1098 aaKnown RBP32.92■■■□□ 2.86
VEGFA-207ENST00000413642 F8W031 263 aaPredicted RBP32.91■■■□□ 2.86
VEGFA-207ENST00000413642 WNT10BO00744 389 aa32.91■■■□□ 2.86
VEGFA-207ENST00000413642 CAPNS2Q96L46 248 aa32.91■■■□□ 2.86
VEGFA-207ENST00000413642 ATG9AQ7Z3C6 839 aa32.9■■■□□ 2.86
VEGFA-207ENST00000413642 SIL1Q9H173 461 aa32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms