RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 HDAC5Q9UQL6 1122 aa19.72■□□□□ 0.75
MCF2L-211ENST00000413354 MYO3BQ8WXR4 1341 aa19.72■□□□□ 0.75
MCF2L-211ENST00000413354 WTIPA6NIX2 430 aaPredicted RBP19.71■□□□□ 0.75
MCF2L-211ENST00000413354 HIRAP54198 1017 aaPredicted RBP19.71■□□□□ 0.75
MCF2L-211ENST00000413354 C15orf52Q6ZUT6 534 aaKnown RBP19.71■□□□□ 0.75
MCF2L-211ENST00000413354 ARHGAP45Q92619 1136 aa19.71■□□□□ 0.75
MCF2L-211ENST00000413354 CNTNAP1P78357 1384 aa19.7■□□□□ 0.74
MCF2L-211ENST00000413354 TAF5LO75529 589 aa19.7■□□□□ 0.74
MCF2L-211ENST00000413354 KIF4BQ2VIQ3 1234 aa19.7■□□□□ 0.74
MCF2L-211ENST00000413354 TBC1D10BQ4KMP7 808 aaPredicted RBP19.7■□□□□ 0.74
MCF2L-211ENST00000413354 STRIP1Q5VSL9 837 aa19.7■□□□□ 0.74
MCF2L-211ENST00000413354 SAMD7Q7Z3H4 446 aa19.7■□□□□ 0.74
MCF2L-211ENST00000413354 TXNRD3Q86VQ6 643 aa19.7■□□□□ 0.74
MCF2L-211ENST00000413354 ANKRD44Q8N8A2 993 aa19.7■□□□□ 0.74
MCF2L-211ENST00000413354 HELBQ8NG08 1087 aaPredicted RBP19.7■□□□□ 0.74
MCF2L-211ENST00000413354 IPO8O15397 1037 aaKnown RBP19.69■□□□□ 0.74
MCF2L-211ENST00000413354 UBTFL1P0CB47 393 aaPredicted RBP19.69■□□□□ 0.74
MCF2L-211ENST00000413354 KLRK1P26718 216 aa19.69■□□□□ 0.74
MCF2L-211ENST00000413354 ZNF280AP59817 542 aaPredicted RBP19.69■□□□□ 0.74
MCF2L-211ENST00000413354 CDC37L1Q7L3B6 337 aa19.69■□□□□ 0.74
MCF2L-211ENST00000413354 ZNF804AQ7Z570 1209 aa19.69■□□□□ 0.74
MCF2L-211ENST00000413354 FBXW7Q969H0 707 aa19.69■□□□□ 0.74
MCF2L-211ENST00000413354 GMLQ99445 158 aa19.69■□□□□ 0.74
MCF2L-211ENST00000413354 ZBED9Q6R2W3 1325 aa19.69■□□□□ 0.74
MCF2L-211ENST00000413354 MROH5Q6ZUA9 1318 aa19.69■□□□□ 0.74
MCF2L-211ENST00000413354 USP17L8P0C7I0 530 aa19.68■□□□□ 0.74
MCF2L-211ENST00000413354 MMP14P50281 582 aa19.68■□□□□ 0.74
MCF2L-211ENST00000413354 MKRN1Q9UHC7 482 aaKnown RBP19.68■□□□□ 0.74
MCF2L-211ENST00000413354 ABT1Q9ULW3 272 aaKnown RBP19.68■□□□□ 0.74
MCF2L-211ENST00000413354 PLIN1O60240 522 aa19.67■□□□□ 0.74
MCF2L-211ENST00000413354 UBE4AQ14139 1066 aa19.67■□□□□ 0.74
MCF2L-211ENST00000413354 DACT2Q5SW24 774 aa19.67■□□□□ 0.74
MCF2L-211ENST00000413354 RBM26Q5T8P6 1007 aaKnown RBP19.67■□□□□ 0.74
MCF2L-211ENST00000413354 TTLL5Q6EMB2 1281 aa19.67■□□□□ 0.74
MCF2L-211ENST00000413354 GLIS2Q9BZE0 524 aaPredicted RBP19.67■□□□□ 0.74
MCF2L-211ENST00000413354 CD209Q9NNX6 404 aa19.67■□□□□ 0.74
MCF2L-211ENST00000413354 IRS2Q9Y4H2 1338 aa19.67■□□□□ 0.74
MCF2L-211ENST00000413354 TRAF5O00463 557 aa19.66■□□□□ 0.74
MCF2L-211ENST00000413354 OGFOD1Q8N543 542 aa19.66■□□□□ 0.74
MCF2L-211ENST00000413354 DCPSQ96C86 337 aaKnown RBP19.66■□□□□ 0.74
MCF2L-211ENST00000413354 RIPOR2Q9Y4F9 1068 aa19.66■□□□□ 0.74
MCF2L-211ENST00000413354 RASSF10A6NK89 507 aa19.65■□□□□ 0.74
MCF2L-211ENST00000413354 SNAP23O00161 211 aa19.65■□□□□ 0.74
MCF2L-211ENST00000413354 EGFRP00533 1210 aa19.65■□□□□ 0.74
MCF2L-211ENST00000413354 KRT26Q7Z3Y9 468 aa19.65■□□□□ 0.74
MCF2L-211ENST00000413354 PUS3Q9BZE2 481 aaKnown RBP19.65■□□□□ 0.74
MCF2L-211ENST00000413354 MYOZ2Q9NPC6 264 aa19.65■□□□□ 0.74
MCF2L-211ENST00000413354 CELF2O95319 508 aaKnown RBP19.64■□□□□ 0.73
MCF2L-211ENST00000413354 IL1R1P14778 569 aa19.64■□□□□ 0.73
MCF2L-211ENST00000413354 GTF2IP78347 998 aa19.64■□□□□ 0.73
MCF2L-211ENST00000413354 DEFB115Q30KQ5 88 aa19.64■□□□□ 0.73
MCF2L-211ENST00000413354 METTL24Q5JXM2 366 aa19.64■□□□□ 0.73
MCF2L-211ENST00000413354 INTS3Q68E01 1043 aaKnown RBP19.64■□□□□ 0.73
MCF2L-211ENST00000413354 GGA3Q9NZ52 723 aa19.64■□□□□ 0.73
MCF2L-211ENST00000413354 HDAC9Q9UKV0 1011 aa19.64■□□□□ 0.73
MCF2L-211ENST00000413354 ARAP2Q8WZ64 1704 aa19.63■□□□□ 0.73
MCF2L-211ENST00000413354 FMR1Q06787 632 aaKnown RBP eCLIP19.63■□□□□ 0.73
MCF2L-211ENST00000413354 ATF7IPQ6VMQ6 1270 aa19.63■□□□□ 0.73
MCF2L-211ENST00000413354 SULF1Q8IWU6 871 aa19.63■□□□□ 0.73
MCF2L-211ENST00000413354 PITPNM2Q9BZ72 1349 aa19.62■□□□□ 0.73
MCF2L-211ENST00000413354 GNAI3P08754 354 aa19.62■□□□□ 0.73
MCF2L-211ENST00000413354 CST9Q5W186 159 aa19.62■□□□□ 0.73
MCF2L-211ENST00000413354 USP48Q86UV5 1035 aa19.62■□□□□ 0.73
MCF2L-211ENST00000413354 FRAT1Q92837 279 aaPredicted RBP19.62■□□□□ 0.73
MCF2L-211ENST00000413354 TLL2Q9Y6L7 1015 aa19.62■□□□□ 0.73
MCF2L-211ENST00000413354 ECM29Q5VYK3 1845 aa19.62■□□□□ 0.73
MCF2L-211ENST00000413354 MYH13Q9UKX3 1938 aa19.61■□□□□ 0.73
MCF2L-211ENST00000413354 BCAR3O75815 825 aa19.61■□□□□ 0.73
MCF2L-211ENST00000413354 TRIM27P14373 513 aa19.61■□□□□ 0.73
MCF2L-211ENST00000413354 FKBP1AP62942 108 aaKnown RBP19.61■□□□□ 0.73
MCF2L-211ENST00000413354 SCARF1Q14162 830 aa19.61■□□□□ 0.73
MCF2L-211ENST00000413354 LRRC24Q50LG9 513 aa19.61■□□□□ 0.73
MCF2L-211ENST00000413354 MXD3Q9BW11 206 aa19.61■□□□□ 0.73
MCF2L-211ENST00000413354 ZNF408Q9H9D4 720 aa19.61■□□□□ 0.73
MCF2L-211ENST00000413354 FBXO3Q9UK99 471 aa19.61■□□□□ 0.73
MCF2L-211ENST00000413354 LRRFIP2Q9Y608 721 aaKnown RBP19.61■□□□□ 0.73
MCF2L-211ENST00000413354 PDE8BO95263 885 aa19.6■□□□□ 0.73
MCF2L-211ENST00000413354 HIBADHP31937 336 aaKnown RBP19.6■□□□□ 0.73
MCF2L-211ENST00000413354 ECE1P42892 770 aa19.6■□□□□ 0.73
MCF2L-211ENST00000413354 RFX5P48382 616 aaPredicted RBP19.6■□□□□ 0.73
MCF2L-211ENST00000413354 VEGFBP49765 207 aa19.6■□□□□ 0.73
MCF2L-211ENST00000413354 ZKSCAN2Q63HK3 967 aa19.6■□□□□ 0.73
MCF2L-211ENST00000413354 MEIS3Q99687 375 aa19.6■□□□□ 0.73
MCF2L-211ENST00000413354 THSD7BQ9C0I4 1608 aa19.6■□□□□ 0.73
MCF2L-211ENST00000413354 EYA2O00167 538 aa19.59■□□□□ 0.73
MCF2L-211ENST00000413354 ANGEL2Q5VTE6 544 aaKnown RBP19.59■□□□□ 0.73
MCF2L-211ENST00000413354 VPS37DQ86XT2 251 aa19.59■□□□□ 0.73
MCF2L-211ENST00000413354 KIAA0825Q8IV33 1275 aa19.59■□□□□ 0.73
MCF2L-211ENST00000413354 VGLL2Q8N8G2 317 aa19.59■□□□□ 0.73
MCF2L-211ENST00000413354 KLHDC4Q8TBB5 520 aa19.59■□□□□ 0.73
MCF2L-211ENST00000413354 HHIPL1Q96JK4 782 aa19.59■□□□□ 0.73
MCF2L-211ENST00000413354 FAM205AQ6ZU69 1335 aa19.58■□□□□ 0.73
MCF2L-211ENST00000413354 ADM5C9JUS6 153 aa19.58■□□□□ 0.72
MCF2L-211ENST00000413354 SASH1O94885 1247 aa19.58■□□□□ 0.72
MCF2L-211ENST00000413354 HSPA1AP0DMV8 641 aaKnown RBP19.58■□□□□ 0.72
MCF2L-211ENST00000413354 HSPA1BP0DMV9 641 aaKnown RBP19.58■□□□□ 0.72
MCF2L-211ENST00000413354 PTPN12Q05209 780 aaKnown RBP19.58■□□□□ 0.72
MCF2L-211ENST00000413354 PUM3Q15397 648 aaKnown RBP19.58■□□□□ 0.72
MCF2L-211ENST00000413354 CAVIN4Q5BKX8 364 aa19.58■□□□□ 0.72
MCF2L-211ENST00000413354 PAXIP1Q6ZW49 1069 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms