RNA–Protein interactions for RNA: ENST00000412870.1

CASKP1-201, Transcript of calcium/calmodulin dependent serine protein kinase pseudogene 1, humanhuman

BASIC

Gene CASKP1, Length 582 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKP1-201ENST00000412870 SRCIN1Q9C0H9 1055 aa10.08□□□□□ -0.8
CASKP1-201ENST00000412870 TGIF2Q9GZN2 237 aa10.08□□□□□ -0.8
CASKP1-201ENST00000412870 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.08□□□□□ -0.8
CASKP1-201ENST00000412870 TLR7Q9NYK1 1049 aaKnown RBP10.07□□□□□ -0.8
CASKP1-201ENST00000412870 EDN3P14138 238 aa10.06□□□□□ -0.8
CASKP1-201ENST00000412870 ACPPP15309 386 aa10.06□□□□□ -0.8
CASKP1-201ENST00000412870 PTPN12Q05209 780 aaKnown RBP10.06□□□□□ -0.8
CASKP1-201ENST00000412870 TAF1CQ15572 869 aaPredicted RBP10.06□□□□□ -0.8
CASKP1-201ENST00000412870 SREK1Q8WXA9 508 aaKnown RBP10.06□□□□□ -0.8
CASKP1-201ENST00000412870 BHMTQ93088 406 aa10.06□□□□□ -0.8
CASKP1-201ENST00000412870 PNMA5Q96PV4 448 aa10.06□□□□□ -0.8
CASKP1-201ENST00000412870 EHD4Q9H223 541 aa10.06□□□□□ -0.8
CASKP1-201ENST00000412870 KIF4AO95239 1232 aa10.05□□□□□ -0.8
CASKP1-201ENST00000412870 ZNF394Q53GI3 561 aa10.05□□□□□ -0.8
CASKP1-201ENST00000412870 C3orf58Q8NDZ4 430 aa10.05□□□□□ -0.8
CASKP1-201ENST00000412870 TRERF1Q96PN7 1200 aa10.05□□□□□ -0.8
CASKP1-201ENST00000412870 TINF2Q9BSI4 451 aa10.05□□□□□ -0.8
CASKP1-201ENST00000412870 ACBD3Q9H3P7 528 aa10.05□□□□□ -0.8
CASKP1-201ENST00000412870 LRRC4BQ9NT99 713 aa10.05□□□□□ -0.8
CASKP1-201ENST00000412870 ATXN7L1Q9ULK2 861 aaPredicted RBP10.05□□□□□ -0.8
CASKP1-201ENST00000412870 PCDHGB7Q9Y5F8 929 aa10.05□□□□□ -0.8
CASKP1-201ENST00000412870 MAP3K6O95382 1288 aa10.04□□□□□ -0.8
CASKP1-201ENST00000412870 PSAPP07602 524 aa10.04□□□□□ -0.8
CASKP1-201ENST00000412870 SOX18P35713 384 aa10.04□□□□□ -0.8
CASKP1-201ENST00000412870 ST13P50502 369 aaKnown RBP10.04□□□□□ -0.8
CASKP1-201ENST00000412870 OXCT2Q9BYC2 517 aaPredicted RBP10.04□□□□□ -0.8
CASKP1-201ENST00000412870 CCSER2Q9H7U1 834 aa10.04□□□□□ -0.8
CASKP1-201ENST00000412870 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.04□□□□□ -0.8
CASKP1-201ENST00000412870 HOXD8P13378 290 aaPredicted RBP10.03□□□□□ -0.8
CASKP1-201ENST00000412870 ITGB7P26010 798 aa10.03□□□□□ -0.8
CASKP1-201ENST00000412870 TNNI2P48788 182 aa10.03□□□□□ -0.8
CASKP1-201ENST00000412870 RACK1P63244 317 aaKnown RBP10.03□□□□□ -0.8
CASKP1-201ENST00000412870 PRPF40BQ6NWY9 871 aaKnown RBP10.03□□□□□ -0.8
CASKP1-201ENST00000412870 EFCC1Q9HA90 598 aa10.03□□□□□ -0.8
CASKP1-201ENST00000412870 ABCB6Q9NP58 842 aa10.03□□□□□ -0.8
CASKP1-201ENST00000412870 DDX41Q9UJV9 622 aaKnown RBP10.03□□□□□ -0.8
CASKP1-201ENST00000412870 TRPA1O75762 1119 aa10.02□□□□□ -0.81
CASKP1-201ENST00000412870 FGFR3P22607 806 aa10.02□□□□□ -0.81
CASKP1-201ENST00000412870 GSTT1P30711 240 aa10.02□□□□□ -0.81
CASKP1-201ENST00000412870 DHX32Q7L7V1 743 aaKnown RBP10.02□□□□□ -0.81
CASKP1-201ENST00000412870 HS2ST1Q7LGA3 356 aa10.02□□□□□ -0.81
CASKP1-201ENST00000412870 DRC1Q96MC2 740 aa10.02□□□□□ -0.81
CASKP1-201ENST00000412870 TCF12Q99081 682 aa10.02□□□□□ -0.81
CASKP1-201ENST00000412870 ZKSCAN3Q9BRR0 538 aa10.02□□□□□ -0.81
CASKP1-201ENST00000412870 LIN7BQ9HAP6 207 aa10.02□□□□□ -0.81
CASKP1-201ENST00000412870 SRA1Q9HD15 236 aaKnown RBP10.02□□□□□ -0.81
CASKP1-201ENST00000412870 GGT7Q9UJ14 662 aa10.02□□□□□ -0.81
CASKP1-201ENST00000412870 TRAK1Q9UPV9 953 aa10.02□□□□□ -0.81
CASKP1-201ENST00000412870 FCGRTP55899 365 aa10.01□□□□□ -0.81
CASKP1-201ENST00000412870 CTBSQ01459 385 aa10.01□□□□□ -0.81
CASKP1-201ENST00000412870 PLAURQ03405 335 aa10.01□□□□□ -0.81
CASKP1-201ENST00000412870 HYAL2Q12891 473 aa10.01□□□□□ -0.81
CASKP1-201ENST00000412870 FAM182BQ5T319 152 aa10.01□□□□□ -0.81
CASKP1-201ENST00000412870 USP48Q86UV5 1035 aa10.01□□□□□ -0.81
CASKP1-201ENST00000412870 NCAPG2Q86XI2 1143 aa10.01□□□□□ -0.81
CASKP1-201ENST00000412870 CEP120Q8N960 986 aa10.01□□□□□ -0.81
CASKP1-201ENST00000412870 NSUN5Q96P11 429 aaKnown RBP10.01□□□□□ -0.81
CASKP1-201ENST00000412870 ZBTB42B2RXF5 422 aa10□□□□□ -0.81
CASKP1-201ENST00000412870 HOXB4P17483 251 aaPredicted RBP10□□□□□ -0.81
CASKP1-201ENST00000412870 ERMP1Q7Z2K6 904 aa10□□□□□ -0.81
CASKP1-201ENST00000412870 HHIPQ96QV1 700 aa10□□□□□ -0.81
CASKP1-201ENST00000412870 OSMRQ99650 979 aa10□□□□□ -0.81
CASKP1-201ENST00000412870 CAPN10Q9HC96 672 aa10□□□□□ -0.81
CASKP1-201ENST00000412870 COPRSQ9NQ92 184 aa10□□□□□ -0.81
CASKP1-201ENST00000412870 MKL2Q9ULH7 1088 aa10□□□□□ -0.81
CASKP1-201ENST00000412870 TTF2Q9UNY4 1162 aaKnown RBP10□□□□□ -0.81
CASKP1-201ENST00000412870 TMEM238LA0A1B0GVL6 79 aa9.99□□□□□ -0.81
CASKP1-201ENST00000412870 NRLP54845 237 aa9.99□□□□□ -0.81
CASKP1-201ENST00000412870 CCNJLQ8IV13 435 aa9.99□□□□□ -0.81
CASKP1-201ENST00000412870 ZNF654Q8IZM8 581 aa9.99□□□□□ -0.81
CASKP1-201ENST00000412870 RRAGCQ9HB90 399 aa9.99□□□□□ -0.81
CASKP1-201ENST00000412870 DZANK1Q9NVP4 752 aa9.99□□□□□ -0.81
CASKP1-201ENST00000412870 PHF24Q9UPV7 400 aa9.99□□□□□ -0.81
CASKP1-201ENST00000412870 NFKBIEO00221 500 aa9.98□□□□□ -0.81
CASKP1-201ENST00000412870 NSFL1CQ9UNZ2 370 aaKnown RBP9.98□□□□□ -0.81
CASKP1-201ENST00000412870 GRIA4P48058 902 aa9.97□□□□□ -0.81
CASKP1-201ENST00000412870 GPLD1P80108 840 aa9.97□□□□□ -0.81
CASKP1-201ENST00000412870 MLLT1Q03111 559 aaPredicted RBP9.97□□□□□ -0.81
CASKP1-201ENST00000412870 SF3A1Q15459 793 aaKnown RBP9.97□□□□□ -0.81
CASKP1-201ENST00000412870 SLC43A3Q8NBI5 491 aa9.97□□□□□ -0.81
CASKP1-201ENST00000412870 TRPM4Q8TD43 1214 aa9.97□□□□□ -0.81
CASKP1-201ENST00000412870 PPP4R2Q9NY27 417 aa9.97□□□□□ -0.81
CASKP1-201ENST00000412870 METTL12A8MUP2 240 aa9.96□□□□□ -0.82
CASKP1-201ENST00000412870 J3QW42 95 aa9.96□□□□□ -0.82
CASKP1-201ENST00000412870 C2CD2LO14523 706 aa9.96□□□□□ -0.82
CASKP1-201ENST00000412870 MAP2K3P46734 347 aa9.96□□□□□ -0.82
CASKP1-201ENST00000412870 DTHD1Q6ZMT9 781 aa9.96□□□□□ -0.82
CASKP1-201ENST00000412870 KRTAP1-3Q8IUG1 177 aa9.96□□□□□ -0.82
CASKP1-201ENST00000412870 TRIM56Q9BRZ2 755 aaKnown RBP9.96□□□□□ -0.82
CASKP1-201ENST00000412870 NOC4LQ9BVI4 516 aaKnown RBP9.96□□□□□ -0.82
CASKP1-201ENST00000412870 C1QTNF9BB2RNN3 333 aa9.95□□□□□ -0.82
CASKP1-201ENST00000412870 FBXO24O75426 580 aa9.95□□□□□ -0.82
CASKP1-201ENST00000412870 SPRED3Q2MJR0 410 aa9.95□□□□□ -0.82
CASKP1-201ENST00000412870 LINC00114Q6XXX2 140 aa9.95□□□□□ -0.82
CASKP1-201ENST00000412870 HFE2Q6ZVN8 426 aa9.95□□□□□ -0.82
CASKP1-201ENST00000412870 ANKRD24Q8TF21 1146 aa9.95□□□□□ -0.82
CASKP1-201ENST00000412870 EDARADDQ8WWZ3 215 aa9.95□□□□□ -0.82
CASKP1-201ENST00000412870 BHLHE41Q9C0J9 482 aaPredicted RBP9.95□□□□□ -0.82
CASKP1-201ENST00000412870 KBTBD4Q9NVX7 518 aa9.95□□□□□ -0.82
CASKP1-201ENST00000412870 PPP1R1BQ9UD71 204 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms