RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 LRRC8EQ6NSJ5 796 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 MORC1Q86VD1 984 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 BRD1O95696 1058 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 S100A9P06702 114 aaKnown RBP5.16□□□□□ -1.58
PTPN13-202ENST00000411767 KRR1Q13601 381 aaKnown RBP5.16□□□□□ -1.58
PTPN13-202ENST00000411767 ANKRD20A4Q4UJ75 823 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 ANKRD20A8PQ5CZ79 823 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 ANKRD20A2Q5SQ80 823 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 ANKRD20A1Q5TYW2 823 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 KRT80Q6KB66 452 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPN13-202ENST00000411767 MCCD1P59942 119 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-202ENST00000411767 TSTA3Q13630 321 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-202ENST00000411767 SIX6OS1Q8N1H7 587 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 PRPF38AQ8NAV1 312 aaKnown RBP5.16□□□□□ -1.58
PTPN13-202ENST00000411767 ENOX1Q8TC92 643 aaKnown RBP5.16□□□□□ -1.58
PTPN13-202ENST00000411767 P3H4Q92791 437 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 UTP6Q9NYH9 597 aaKnown RBP5.16□□□□□ -1.58
PTPN13-202ENST00000411767 KIF23Q02241 960 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-202ENST00000411767 CEP85Q6P2H3 762 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 CCDC13Q8IYE1 715 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 RAPGEF4Q8WZA2 1011 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 WASF1Q92558 559 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 TRAIPQ9BWF2 469 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 ZSWIM4Q9H7M6 989 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 PRG3Q9Y2Y8 225 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-202ENST00000411767 FAM177BA6PVY3 158 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 SYNCRIPO60506 623 aaKnown RBP5.16□□□□□ -1.58
PTPN13-202ENST00000411767 C11orf88Q6PI97 169 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 MCUR1Q96AQ8 359 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 C19orf60Q96EN9 201 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 UPF3BQ9BZI7 483 aaKnown RBP5.16□□□□□ -1.58
PTPN13-202ENST00000411767 MED4Q9NPJ6 270 aa5.16□□□□□ -1.58
PTPN13-202ENST00000411767 GOLGA8AA7E2F4 631 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 NEMFO60524 1076 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 DDX58O95786 925 aaKnown RBP5.15□□□□□ -1.58
PTPN13-202ENST00000411767 SFSWAPQ12872 951 aaKnown RBP5.15□□□□□ -1.58
PTPN13-202ENST00000411767 KMT5BQ4FZB7 885 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 CCDC84Q86UT8 332 aaPredicted RBP5.15□□□□□ -1.58
PTPN13-202ENST00000411767 ZSCAN30Q86W11 494 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 PHKBQ93100 1093 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 POLR3CQ9BUI4 534 aaPredicted RBP5.15□□□□□ -1.58
PTPN13-202ENST00000411767 CCDC90BQ9GZT6 254 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 TRAK1Q9UPV9 953 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 AFG3L2Q9Y4W6 797 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 PHLDB1Q86UU1 1377 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 FAM95CA0A1B0GW59 222 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 RLBP1P12271 317 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 DENND6AQ8IWF6 608 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 FSIP1Q8NA03 581 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 PDZD8Q8NEN9 1154 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 RAB34Q9BZG1 259 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 MAP10Q9P2G4 905 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 TLK1Q9UKI8 766 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 SMCO3A2RU48 225 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 YEATS4O95619 227 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 FOSL2P15408 326 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 TCF3P15923 654 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 MYO1EQ12965 1108 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 KRT40Q6A162 431 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 PAPOLBQ9NRJ5 636 aaKnown RBP5.15□□□□□ -1.58
PTPN13-202ENST00000411767 KTN1Q86UP2 1357 aaKnown RBP5.15□□□□□ -1.58
PTPN13-202ENST00000411767 GOLGA8CPA6NN73 597 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 LCA5LO95447 670 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 PARP10Q53GL7 1025 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 TLK2Q86UE8 772 aa5.15□□□□□ -1.58
PTPN13-202ENST00000411767 FCHSD2O94868 740 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 GSNP06396 782 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 PYGMP11217 842 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 HSPA1LP34931 641 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 APOBRQ0VD83 1088 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 TRIM71Q2Q1W2 868 aaKnown RBP5.15□□□□□ -1.59
PTPN13-202ENST00000411767 KAZNQ674X7 775 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 KRT77Q7Z794 578 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 PIGUQ9H490 435 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 AKAP2Q9Y2D5 859 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 GHRP10912 638 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 CTTNQ14247 550 aaKnown RBP5.15□□□□□ -1.59
PTPN13-202ENST00000411767 CCDC93Q567U6 631 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 NLRP13Q86W25 1043 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 CCHCR1Q8TD31 782 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 PHAXQ9H814 394 aaKnown RBP5.15□□□□□ -1.59
PTPN13-202ENST00000411767 COPG2Q9UBF2 871 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 PRR23D1E9PI22 279 aaPredicted RBP5.15□□□□□ -1.59
PTPN13-202ENST00000411767 EXOC5O00471 708 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 PRR23D2P0DMB1 279 aaPredicted RBP5.15□□□□□ -1.59
PTPN13-202ENST00000411767 IFNA8P32881 189 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 RAB14P61106 215 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 NMIQ13287 307 aaPredicted RBP5.15□□□□□ -1.59
PTPN13-202ENST00000411767 ANKRD1Q15327 319 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 CFAP70Q5T0N1 1121 aa5.15□□□□□ -1.59
PTPN13-202ENST00000411767 GEMIN8Q9NWZ8 242 aaKnown RBP5.15□□□□□ -1.59
PTPN13-202ENST00000411767 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.15□□□□□ -1.59
PTPN13-202ENST00000411767 TROVE2P10155 538 aaKnown RBP eCLIP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 EEF1DP29692 281 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 PPIDQ08752 370 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 PASD1Q8IV76 773 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 MICALL2Q8IY33 904 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 FLCNQ8NFG4 579 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 TBC1D5Q92609 795 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms