RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 MAP4K1Q92918 833 aa12.42□□□□□ -0.42
SNORD88C-201ENST00000408061 KCNB2Q92953 911 aa12.42□□□□□ -0.42
SNORD88C-201ENST00000408061 LEMD3Q9Y2U8 911 aa12.42□□□□□ -0.42
SNORD88C-201ENST00000408061 AKAP11Q9UKA4 1901 aa12.42□□□□□ -0.42
SNORD88C-201ENST00000408061 NRXN2Q9P2S2 1712 aa12.42□□□□□ -0.42
SNORD88C-201ENST00000408061 PDS5AQ29RF7 1337 aaKnown RBP12.41□□□□□ -0.42
SNORD88C-201ENST00000408061 CCDC171Q6TFL3 1326 aa12.41□□□□□ -0.42
SNORD88C-201ENST00000408061 ZKSCAN1P17029 563 aaPredicted RBP12.41□□□□□ -0.42
SNORD88C-201ENST00000408061 ADORA1P30542 326 aa12.41□□□□□ -0.42
SNORD88C-201ENST00000408061 SLC15A2Q16348 729 aa12.41□□□□□ -0.42
SNORD88C-201ENST00000408061 ZNF827Q17R98 1081 aa12.41□□□□□ -0.42
SNORD88C-201ENST00000408061 ZMYM1Q5SVZ6 1142 aa12.41□□□□□ -0.42
SNORD88C-201ENST00000408061 TM6SF1Q9BZW5 370 aa12.41□□□□□ -0.42
SNORD88C-201ENST00000408061 HMG20BQ9P0W2 317 aa12.41□□□□□ -0.42
SNORD88C-201ENST00000408061 PARP3Q9Y6F1 533 aa12.41□□□□□ -0.42
SNORD88C-201ENST00000408061 MED23Q9ULK4 1368 aa12.41□□□□□ -0.42
SNORD88C-201ENST00000408061 PDE6BP35913 854 aa12.4□□□□□ -0.42
SNORD88C-201ENST00000408061 FKBP4Q02790 459 aaKnown RBP eCLIP12.4□□□□□ -0.42
SNORD88C-201ENST00000408061 TSGA10IPQ3SY00 556 aa12.4□□□□□ -0.42
SNORD88C-201ENST00000408061 C15orf52Q6ZUT6 534 aaKnown RBP12.4□□□□□ -0.42
SNORD88C-201ENST00000408061 C3orf67Q6ZVT6 689 aa12.4□□□□□ -0.42
SNORD88C-201ENST00000408061 SLC16A10Q8TF71 515 aa12.4□□□□□ -0.42
SNORD88C-201ENST00000408061 CELF1Q92879 486 aaKnown RBP12.4□□□□□ -0.42
SNORD88C-201ENST00000408061 TBC1D2Q9BYX2 928 aa12.4□□□□□ -0.42
SNORD88C-201ENST00000408061 U3KPZ7 1027 aaPredicted RBP12.4□□□□□ -0.42
SNORD88C-201ENST00000408061 MYH7P12883 1935 aa12.4□□□□□ -0.42
SNORD88C-201ENST00000408061 A0A1B0GUL6 1792 aa12.4□□□□□ -0.42
SNORD88C-201ENST00000408061 ZNF804BA4D1E1 1349 aa12.39□□□□□ -0.43
SNORD88C-201ENST00000408061 MSH5O43196 834 aa12.39□□□□□ -0.43
SNORD88C-201ENST00000408061 ALDH1B1P30837 517 aa12.39□□□□□ -0.43
SNORD88C-201ENST00000408061 ZAP70P43403 619 aa12.39□□□□□ -0.43
SNORD88C-201ENST00000408061 KRT32Q14532 448 aa12.39□□□□□ -0.43
SNORD88C-201ENST00000408061 NECTIN1Q15223 517 aa12.39□□□□□ -0.43
SNORD88C-201ENST00000408061 UBE3CQ15386 1083 aa12.39□□□□□ -0.43
SNORD88C-201ENST00000408061 SPATA5Q8NB90 893 aa12.39□□□□□ -0.43
SNORD88C-201ENST00000408061 HELBQ8NG08 1087 aaPredicted RBP12.39□□□□□ -0.43
SNORD88C-201ENST00000408061 APPBP2Q92624 585 aa12.39□□□□□ -0.43
SNORD88C-201ENST00000408061 DSCC1Q9BVC3 393 aa12.39□□□□□ -0.43
SNORD88C-201ENST00000408061 DENND2AQ9ULE3 1009 aa12.39□□□□□ -0.43
SNORD88C-201ENST00000408061 XDHP47989 1333 aa12.38□□□□□ -0.43
SNORD88C-201ENST00000408061 PNPLA7Q6ZV29 1317 aa12.38□□□□□ -0.43
SNORD88C-201ENST00000408061 TAF5LO75529 589 aa12.38□□□□□ -0.43
SNORD88C-201ENST00000408061 PSMA5P28066 241 aa12.38□□□□□ -0.43
SNORD88C-201ENST00000408061 MCAMP43121 646 aa12.38□□□□□ -0.43
SNORD88C-201ENST00000408061 PHKA1P46020 1223 aa12.38□□□□□ -0.43
SNORD88C-201ENST00000408061 KCNJ4P48050 445 aa12.38□□□□□ -0.43
SNORD88C-201ENST00000408061 DDR1Q08345 913 aa12.38□□□□□ -0.43
SNORD88C-201ENST00000408061 MAP3K12Q12852 859 aa12.38□□□□□ -0.43
SNORD88C-201ENST00000408061 FBXO33Q7Z6M2 555 aa12.38□□□□□ -0.43
SNORD88C-201ENST00000408061 FAM227BQ96M60 508 aa12.38□□□□□ -0.43
SNORD88C-201ENST00000408061 CTNNA3Q9UI47 895 aa12.38□□□□□ -0.43
SNORD88C-201ENST00000408061 A0A0D9SFI3 127 aa12.37□□□□□ -0.43
SNORD88C-201ENST00000408061 K7ELQ4 463 aaPredicted RBP12.37□□□□□ -0.43
SNORD88C-201ENST00000408061 NPR1P16066 1061 aa12.37□□□□□ -0.43
SNORD88C-201ENST00000408061 ATP2B4P23634 1241 aa12.37□□□□□ -0.43
SNORD88C-201ENST00000408061 EN1Q05925 392 aaPredicted RBP12.37□□□□□ -0.43
SNORD88C-201ENST00000408061 EZH2Q15910 746 aaKnown RBP12.37□□□□□ -0.43
SNORD88C-201ENST00000408061 VPS37DQ86XT2 251 aa12.37□□□□□ -0.43
SNORD88C-201ENST00000408061 SP8Q8IXZ3 490 aa12.37□□□□□ -0.43
SNORD88C-201ENST00000408061 EDC3Q96F86 508 aaKnown RBP12.37□□□□□ -0.43
SNORD88C-201ENST00000408061 PODXL2Q9NZ53 605 aa12.37□□□□□ -0.43
SNORD88C-201ENST00000408061 CYP2E1P05181 493 aaPredicted RBP12.36□□□□□ -0.43
SNORD88C-201ENST00000408061 HIBADHP31937 336 aaKnown RBP12.36□□□□□ -0.43
SNORD88C-201ENST00000408061 ADD2P35612 726 aa12.36□□□□□ -0.43
SNORD88C-201ENST00000408061 WASHC4Q2M389 1173 aa12.36□□□□□ -0.43
SNORD88C-201ENST00000408061 FAM84BQ96KN1 310 aaPredicted RBP12.36□□□□□ -0.43
SNORD88C-201ENST00000408061 TMX4Q9H1E5 349 aaPredicted RBP12.36□□□□□ -0.43
SNORD88C-201ENST00000408061 ALDH8A1Q9H2A2 487 aaPredicted RBP12.36□□□□□ -0.43
SNORD88C-201ENST00000408061 RBM8AQ9Y5S9 174 aaKnown RBP12.36□□□□□ -0.43
SNORD88C-201ENST00000408061 TAF1P21675 1872 aa12.36□□□□□ -0.43
SNORD88C-201ENST00000408061 TNRC6CQ9HCJ0 1690 aaKnown RBP12.35□□□□□ -0.43
SNORD88C-201ENST00000408061 DOCK2Q92608 1830 aa12.35□□□□□ -0.43
SNORD88C-201ENST00000408061 RPAP1Q9BWH6 1393 aaPredicted RBP12.35□□□□□ -0.43
SNORD88C-201ENST00000408061 MMP10P09238 476 aa12.35□□□□□ -0.43
SNORD88C-201ENST00000408061 HMGB1P09429 215 aaKnown RBP12.35□□□□□ -0.43
SNORD88C-201ENST00000408061 NEK4P51957 841 aa12.35□□□□□ -0.43
SNORD88C-201ENST00000408061 PTH1RQ03431 593 aa12.35□□□□□ -0.43
SNORD88C-201ENST00000408061 RASGRF1Q13972 1273 aa12.35□□□□□ -0.43
SNORD88C-201ENST00000408061 SCARF1Q14162 830 aa12.35□□□□□ -0.43
SNORD88C-201ENST00000408061 ZGPATQ8N5A5 531 aaKnown RBP12.35□□□□□ -0.43
SNORD88C-201ENST00000408061 IL25Q9H293 177 aa12.35□□□□□ -0.43
SNORD88C-201ENST00000408061 ANTXR1Q9H6X2 564 aa12.35□□□□□ -0.43
SNORD88C-201ENST00000408061 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
SNORD88C-201ENST00000408061 SNX14Q9Y5W7 946 aa12.35□□□□□ -0.43
SNORD88C-201ENST00000408061 SRGNP10124 158 aa12.34□□□□□ -0.43
SNORD88C-201ENST00000408061 GNAT2P19087 354 aa12.34□□□□□ -0.43
SNORD88C-201ENST00000408061 BCAMP50895 628 aa12.34□□□□□ -0.43
SNORD88C-201ENST00000408061 ANKRD1Q15327 319 aa12.34□□□□□ -0.43
SNORD88C-201ENST00000408061 GRIPAP1Q4V328 841 aa12.34□□□□□ -0.43
SNORD88C-201ENST00000408061 SLC9C2Q5TAH2 1124 aa12.34□□□□□ -0.43
SNORD88C-201ENST00000408061 CREB3L3Q68CJ9 461 aa12.34□□□□□ -0.43
SNORD88C-201ENST00000408061 SPTY2D1Q68D10 685 aaPredicted RBP12.34□□□□□ -0.43
SNORD88C-201ENST00000408061 STYK1Q6J9G0 422 aa12.34□□□□□ -0.43
SNORD88C-201ENST00000408061 MASTLQ96GX5 879 aa12.34□□□□□ -0.43
SNORD88C-201ENST00000408061 CWC22Q9HCG8 908 aaKnown RBP12.34□□□□□ -0.43
SNORD88C-201ENST00000408061 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
SNORD88C-201ENST00000408061 ANKIB1Q9P2G1 1089 aa12.34□□□□□ -0.43
SNORD88C-201ENST00000408061 SLC27A2O14975 620 aa12.33□□□□□ -0.44
SNORD88C-201ENST00000408061 ALX1Q15699 326 aa12.33□□□□□ -0.44
SNORD88C-201ENST00000408061 VPS53Q5VIR6 699 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms