RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ADAM19Q9H013 955 aa8.49□□□□□ -1.05
HMGB1P13-201ENST00000406019 MFAP1P55081 439 aaKnown RBP8.48□□□□□ -1.05
HMGB1P13-201ENST00000406019 GDF6Q6KF10 455 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P13-201ENST00000406019 NCAPG2Q86XI2 1143 aa8.48□□□□□ -1.05
HMGB1P13-201ENST00000406019 PMEPA1Q969W9 287 aa8.48□□□□□ -1.05
HMGB1P13-201ENST00000406019 ZKSCAN3Q9BRR0 538 aa8.48□□□□□ -1.05
HMGB1P13-201ENST00000406019 RBSNQ9H1K0 784 aa8.48□□□□□ -1.05
HMGB1P13-201ENST00000406019 LATS2Q9NRM7 1088 aa8.48□□□□□ -1.05
HMGB1P13-201ENST00000406019 DLL1O00548 723 aa8.47□□□□□ -1.05
HMGB1P13-201ENST00000406019 TRPA1O75762 1119 aa8.47□□□□□ -1.05
HMGB1P13-201ENST00000406019 RAC1P63000 192 aa8.47□□□□□ -1.05
HMGB1P13-201ENST00000406019 SETDB1Q15047 1291 aa8.47□□□□□ -1.05
HMGB1P13-201ENST00000406019 USPL1Q5W0Q7 1092 aa8.47□□□□□ -1.05
HMGB1P13-201ENST00000406019 CEP135Q66GS9 1140 aa8.47□□□□□ -1.05
HMGB1P13-201ENST00000406019 CACTIN-AS1Q8N1I8 211 aa8.47□□□□□ -1.05
HMGB1P13-201ENST00000406019 IL22RA1Q8N6P7 574 aa8.47□□□□□ -1.05
HMGB1P13-201ENST00000406019 ALKBH8Q96BT7 664 aaKnown RBP8.47□□□□□ -1.05
HMGB1P13-201ENST00000406019 MSTNO14793 375 aa8.46□□□□□ -1.06
HMGB1P13-201ENST00000406019 SMNDC1O75940 238 aaKnown RBP eCLIP8.46□□□□□ -1.06
HMGB1P13-201ENST00000406019 ORC1Q13415 861 aa8.46□□□□□ -1.06
HMGB1P13-201ENST00000406019 ADGRE1Q14246 886 aa8.46□□□□□ -1.06
HMGB1P13-201ENST00000406019 SHISA2Q6UWI4 295 aa8.46□□□□□ -1.06
HMGB1P13-201ENST00000406019 GALNT12Q8IXK2 581 aa8.46□□□□□ -1.06
HMGB1P13-201ENST00000406019 TMEM102Q8N9M5 508 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P13-201ENST00000406019 TTC16Q8NEE8 873 aa8.46□□□□□ -1.06
HMGB1P13-201ENST00000406019 SPACA7Q96KW9 195 aa8.46□□□□□ -1.06
HMGB1P13-201ENST00000406019 AMOTL2Q9Y2J4 779 aa8.46□□□□□ -1.06
HMGB1P13-201ENST00000406019 POLR3DP05423 398 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P13-201ENST00000406019 EPHA1P21709 976 aa8.45□□□□□ -1.06
HMGB1P13-201ENST00000406019 TMC7Q7Z402 723 aa8.45□□□□□ -1.06
HMGB1P13-201ENST00000406019 NXPE3Q969Y0 559 aa8.45□□□□□ -1.06
HMGB1P13-201ENST00000406019 LENG1Q96BZ8 264 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P13-201ENST00000406019 BHLHE41Q9C0J9 482 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P13-201ENST00000406019 DCTN4Q9UJW0 460 aa8.45□□□□□ -1.06
HMGB1P13-201ENST00000406019 SOX13Q9UN79 622 aa8.45□□□□□ -1.06
HMGB1P13-201ENST00000406019 PDE2AO00408 941 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P13-201ENST00000406019 EDN3P14138 238 aa8.44□□□□□ -1.06
HMGB1P13-201ENST00000406019 PDE3BQ13370 1112 aa8.44□□□□□ -1.06
HMGB1P13-201ENST00000406019 DSC3Q14574 896 aa8.44□□□□□ -1.06
HMGB1P13-201ENST00000406019 MBTPS1Q14703 1052 aa8.44□□□□□ -1.06
HMGB1P13-201ENST00000406019 GALNT11Q8NCW6 608 aa8.44□□□□□ -1.06
HMGB1P13-201ENST00000406019 OSMRQ99650 979 aa8.44□□□□□ -1.06
HMGB1P13-201ENST00000406019 LACRTQ9GZZ8 138 aa8.44□□□□□ -1.06
HMGB1P13-201ENST00000406019 SRA1Q9HD15 236 aaKnown RBP8.44□□□□□ -1.06
HMGB1P13-201ENST00000406019 CDC27P30260 824 aa8.43□□□□□ -1.06
HMGB1P13-201ENST00000406019 DMRTB1Q96MA1 342 aa8.43□□□□□ -1.06
HMGB1P13-201ENST00000406019 SH2B1Q9NRF2 756 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P13-201ENST00000406019 A0A1W2PP55 124 aa8.42□□□□□ -1.06
HMGB1P13-201ENST00000406019 PTPRAP18433 802 aa8.42□□□□□ -1.06
HMGB1P13-201ENST00000406019 NACC1Q96RE7 527 aa8.42□□□□□ -1.06
HMGB1P13-201ENST00000406019 TCF12Q99081 682 aa8.42□□□□□ -1.06
HMGB1P13-201ENST00000406019 MUC3BQ9H195 1237 aa8.42□□□□□ -1.06
HMGB1P13-201ENST00000406019 PPME1Q9Y570 386 aa8.42□□□□□ -1.06
HMGB1P13-201ENST00000406019 C9orf172C9J069 976 aa8.41□□□□□ -1.06
HMGB1P13-201ENST00000406019 EIF1AYO14602 144 aaKnown RBP8.41□□□□□ -1.06
HMGB1P13-201ENST00000406019 TREHO43280 583 aa8.41□□□□□ -1.06
HMGB1P13-201ENST00000406019 APBA3O96018 575 aa8.41□□□□□ -1.06
HMGB1P13-201ENST00000406019 VN1R5Q7Z5H4 357 aa8.41□□□□□ -1.06
HMGB1P13-201ENST00000406019 MAP4K3Q8IVH8 894 aa8.41□□□□□ -1.06
HMGB1P13-201ENST00000406019 SSBP4Q9BWG4 385 aaPredicted RBP8.41□□□□□ -1.06
HMGB1P13-201ENST00000406019 NIF3L1Q9GZT8 377 aa8.41□□□□□ -1.06
HMGB1P13-201ENST00000406019 BIN2Q9UBW5 565 aaPredicted RBP8.41□□□□□ -1.06
HMGB1P13-201ENST00000406019 LINC01387J3KSC0 135 aa8.4□□□□□ -1.06
HMGB1P13-201ENST00000406019 CPNE3O75131 537 aaKnown RBP8.4□□□□□ -1.06
HMGB1P13-201ENST00000406019 FOXD4L6Q3SYB3 417 aaPredicted RBP8.4□□□□□ -1.06
HMGB1P13-201ENST00000406019 KIAA0319Q5VV43 1072 aa8.4□□□□□ -1.06
HMGB1P13-201ENST00000406019 TXNDC11Q6PKC3 985 aa8.4□□□□□ -1.06
HMGB1P13-201ENST00000406019 FOXD4L3Q6VB84 417 aaPredicted RBP8.4□□□□□ -1.06
HMGB1P13-201ENST00000406019 CCNJLQ8IV13 435 aa8.4□□□□□ -1.06
HMGB1P13-201ENST00000406019 DNAJC25Q9H1X3 360 aa8.4□□□□□ -1.06
HMGB1P13-201ENST00000406019 KCNK4Q9NYG8 393 aa8.4□□□□□ -1.06
HMGB1P13-201ENST00000406019 H3BRJ5 948 aa8.39□□□□□ -1.07
HMGB1P13-201ENST00000406019 IGF2-ASQ6U949 168 aa8.39□□□□□ -1.07
HMGB1P13-201ENST00000406019 CSRNP1Q96S65 589 aa8.39□□□□□ -1.07
HMGB1P13-201ENST00000406019 METTL12A8MUP2 240 aa8.38□□□□□ -1.07
HMGB1P13-201ENST00000406019 FSCN2O14926 492 aa8.38□□□□□ -1.07
HMGB1P13-201ENST00000406019 ADAM11O75078 769 aa8.38□□□□□ -1.07
HMGB1P13-201ENST00000406019 GATA4P43694 442 aa8.38□□□□□ -1.07
HMGB1P13-201ENST00000406019 HGSNATQ68CP4 663 aa8.38□□□□□ -1.07
HMGB1P13-201ENST00000406019 Q6ZS46 218 aa8.38□□□□□ -1.07
HMGB1P13-201ENST00000406019 WISP1O95388 367 aa8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 NEFLP07196 543 aa8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 MAPK1P28482 360 aa8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 NOS3P29474 1203 aa8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 GRIA4P48058 902 aa8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 NRG1Q02297 640 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 FMR1Q06787 632 aaKnown RBP eCLIP8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 TXNRD3Q86VQ6 643 aa8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 GLIS3Q8NEA6 775 aa8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 FOXD4L4Q8WXT5 416 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 BSNDQ8WZ55 320 aa8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 WNT8BQ93098 351 aa8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 CCDC74AQ96AQ1 378 aa8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 ASB16Q96NS5 453 aa8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 CARD10Q9BWT7 1032 aa8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 NPHS2Q9NP85 383 aa8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 TPSG1Q9NRR2 321 aa8.37□□□□□ -1.07
HMGB1P13-201ENST00000406019 F8W735 103 aaPredicted RBP8.36□□□□□ -1.07
HMGB1P13-201ENST00000406019 ENOX2Q16206 610 aaKnown RBP8.36□□□□□ -1.07
HMGB1P13-201ENST00000406019 TMEM130Q8N3G9 435 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms