RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 MYH15Q9Y2K3 1946 aa12.59□□□□□ -0.39
CLIP4-204ENST00000404424 TIMM10P62072 90 aa12.59□□□□□ -0.39
CLIP4-204ENST00000404424 IQCB1Q15051 598 aa12.59□□□□□ -0.39
CLIP4-204ENST00000404424 ZNF710Q8N1W2 664 aa12.59□□□□□ -0.39
CLIP4-204ENST00000404424 CLIP2Q9UDT6 1046 aa12.59□□□□□ -0.39
CLIP4-204ENST00000404424 DCCP43146 1447 aa12.59□□□□□ -0.39
CLIP4-204ENST00000404424 NBPF26B4DH59 902 aa12.59□□□□□ -0.39
CLIP4-204ENST00000404424 NEMFO60524 1076 aa12.59□□□□□ -0.39
CLIP4-204ENST00000404424 EVCP57679 992 aa12.59□□□□□ -0.39
CLIP4-204ENST00000404424 NBPF14Q5TI25 921 aa12.59□□□□□ -0.39
CLIP4-204ENST00000404424 ZSCAN25Q6NSZ9 544 aa12.59□□□□□ -0.39
CLIP4-204ENST00000404424 NBPF10Q6P3W6 841 aaKnown RBP12.59□□□□□ -0.39
CLIP4-204ENST00000404424 NBPF15Q8N660 670 aa12.59□□□□□ -0.39
CLIP4-204ENST00000404424 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
CLIP4-204ENST00000404424 CPDO75976 1380 aa12.58□□□□□ -0.4
CLIP4-204ENST00000404424 KINO60870 393 aaKnown RBP12.58□□□□□ -0.4
CLIP4-204ENST00000404424 PDIA3P30101 505 aaKnown RBP12.58□□□□□ -0.4
CLIP4-204ENST00000404424 MRFAP1L1Q96HT8 127 aa12.58□□□□□ -0.4
CLIP4-204ENST00000404424 CTNNA3Q9UI47 895 aa12.58□□□□□ -0.4
CLIP4-204ENST00000404424 TNS3Q68CZ2 1445 aa12.58□□□□□ -0.4
CLIP4-204ENST00000404424 MAST3O60307 1309 aa12.58□□□□□ -0.4
CLIP4-204ENST00000404424 A0A1B0GUL7 405 aa12.57□□□□□ -0.4
CLIP4-204ENST00000404424 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
CLIP4-204ENST00000404424 CTIFO43310 598 aaKnown RBP12.57□□□□□ -0.4
CLIP4-204ENST00000404424 CCT2P78371 535 aaKnown RBP12.57□□□□□ -0.4
CLIP4-204ENST00000404424 CEBPZQ03701 1054 aaKnown RBP12.57□□□□□ -0.4
CLIP4-204ENST00000404424 FAM160A1Q05DH4 1040 aa12.57□□□□□ -0.4
CLIP4-204ENST00000404424 SNW1Q13573 536 aaKnown RBP12.57□□□□□ -0.4
CLIP4-204ENST00000404424 ENGASEQ8NFI3 743 aa12.57□□□□□ -0.4
CLIP4-204ENST00000404424 USP28Q96RU2 1077 aa12.57□□□□□ -0.4
CLIP4-204ENST00000404424 BCL2L12Q9HB09 334 aa12.57□□□□□ -0.4
CLIP4-204ENST00000404424 ANO10Q9NW15 660 aa12.57□□□□□ -0.4
CLIP4-204ENST00000404424 ERVV-2B6SEH9 535 aa12.57□□□□□ -0.4
CLIP4-204ENST00000404424 ZFYP08048 801 aaPredicted RBP12.57□□□□□ -0.4
CLIP4-204ENST00000404424 TTLL7Q6ZT98 887 aa12.57□□□□□ -0.4
CLIP4-204ENST00000404424 NRBP1Q9UHY1 535 aa12.57□□□□□ -0.4
CLIP4-204ENST00000404424 NUP188Q5SRE5 1749 aa12.57□□□□□ -0.4
CLIP4-204ENST00000404424 TRHP20396 242 aaPredicted RBP12.56□□□□□ -0.4
CLIP4-204ENST00000404424 CHRNA2Q15822 529 aa12.56□□□□□ -0.4
CLIP4-204ENST00000404424 CEP126Q9P2H0 1117 aa12.56□□□□□ -0.4
CLIP4-204ENST00000404424 CCDC9Q9Y3X0 531 aaKnown RBP12.56□□□□□ -0.4
CLIP4-204ENST00000404424 CARMIL3Q8ND23 1372 aa12.56□□□□□ -0.4
CLIP4-204ENST00000404424 PCDH11XQ9BZA7 1347 aa12.56□□□□□ -0.4
CLIP4-204ENST00000404424 PCDH11YQ9BZA8 1340 aa12.56□□□□□ -0.4
CLIP4-204ENST00000404424 BECN2A8MW95 431 aa12.56□□□□□ -0.4
CLIP4-204ENST00000404424 SYCP1Q15431 976 aa12.56□□□□□ -0.4
CLIP4-204ENST00000404424 LRRC24Q50LG9 513 aa12.56□□□□□ -0.4
CLIP4-204ENST00000404424 CCDC158Q5M9N0 1113 aa12.56□□□□□ -0.4
CLIP4-204ENST00000404424 SMAP1Q8IYB5 467 aaPredicted RBP12.56□□□□□ -0.4
CLIP4-204ENST00000404424 GOLPH3LQ9H4A5 285 aa12.56□□□□□ -0.4
CLIP4-204ENST00000404424 RTEL1Q9NZ71 1219 aa12.56□□□□□ -0.4
CLIP4-204ENST00000404424 AKAP2Q9Y2D5 859 aa12.56□□□□□ -0.4
CLIP4-204ENST00000404424 DHX16O60231 1041 aaKnown RBP12.55□□□□□ -0.4
CLIP4-204ENST00000404424 LRMPQ12912 555 aa12.55□□□□□ -0.4
CLIP4-204ENST00000404424 ADALQ6DHV7 355 aa12.55□□□□□ -0.4
CLIP4-204ENST00000404424 C11orf57Q6ZUT1 292 aaPredicted RBP12.55□□□□□ -0.4
CLIP4-204ENST00000404424 RGS22Q8NE09 1264 aa12.55□□□□□ -0.4
CLIP4-204ENST00000404424 PAXBP1Q9Y5B6 917 aa12.55□□□□□ -0.4
CLIP4-204ENST00000404424 TJP1Q07157 1748 aa12.55□□□□□ -0.4
CLIP4-204ENST00000404424 A0A1W2PQ27 194 aa12.55□□□□□ -0.4
CLIP4-204ENST00000404424 A0A1W2PQ64 194 aa12.55□□□□□ -0.4
CLIP4-204ENST00000404424 A0A1W2PQD8 194 aa12.55□□□□□ -0.4
CLIP4-204ENST00000404424 SMTNL1A8MU46 457 aa12.55□□□□□ -0.4
CLIP4-204ENST00000404424 ME1P48163 572 aa12.55□□□□□ -0.4
CLIP4-204ENST00000404424 IMMTQ16891 758 aaKnown RBP12.55□□□□□ -0.4
CLIP4-204ENST00000404424 SLFNL1Q499Z3 407 aa12.55□□□□□ -0.4
CLIP4-204ENST00000404424 CABLES1Q8TDN4 633 aa12.55□□□□□ -0.4
CLIP4-204ENST00000404424 CACTINQ8WUQ7 758 aaKnown RBP12.55□□□□□ -0.4
CLIP4-204ENST00000404424 TSC1Q92574 1164 aa12.55□□□□□ -0.4
CLIP4-204ENST00000404424 NAT10Q9H0A0 1025 aaKnown RBP12.55□□□□□ -0.4
CLIP4-204ENST00000404424 NCOA5Q9HCD5 579 aaKnown RBP12.55□□□□□ -0.4
CLIP4-204ENST00000404424 ABCC12Q96J65 1359 aa12.55□□□□□ -0.4
CLIP4-204ENST00000404424 UBR2Q8IWV8 1755 aa12.54□□□□□ -0.4
CLIP4-204ENST00000404424 M0R2C6 588 aa12.54□□□□□ -0.4
CLIP4-204ENST00000404424 LRRC8AQ8IWT6 810 aa12.54□□□□□ -0.4
CLIP4-204ENST00000404424 CEP57L1Q8IYX8 460 aa12.54□□□□□ -0.4
CLIP4-204ENST00000404424 FSIP1Q8NA03 581 aa12.54□□□□□ -0.4
CLIP4-204ENST00000404424 ZCRB1Q8TBF4 217 aaKnown RBP12.54□□□□□ -0.4
CLIP4-204ENST00000404424 ANKRD7Q92527 254 aa12.54□□□□□ -0.4
CLIP4-204ENST00000404424 MRPS27Q92552 414 aaKnown RBP12.54□□□□□ -0.4
CLIP4-204ENST00000404424 OSBP2Q969R2 916 aa12.54□□□□□ -0.4
CLIP4-204ENST00000404424 FTOQ9C0B1 505 aaKnown RBP eCLIP12.54□□□□□ -0.4
CLIP4-204ENST00000404424 NAP1L2Q9ULW6 460 aaPredicted RBP12.54□□□□□ -0.4
CLIP4-204ENST00000404424 SPATA31A3Q5VYP0 1347 aa12.54□□□□□ -0.4
CLIP4-204ENST00000404424 RBM6P78332 1123 aaKnown RBP12.54□□□□□ -0.4
CLIP4-204ENST00000404424 NKX1-1Q15270 411 aaPredicted RBP12.54□□□□□ -0.4
CLIP4-204ENST00000404424 CCDC57Q2TAC2 916 aa12.54□□□□□ -0.4
CLIP4-204ENST00000404424 ILDR1Q86SU0 546 aaPredicted RBP12.54□□□□□ -0.4
CLIP4-204ENST00000404424 DDX17Q92841 729 aaKnown RBP12.54□□□□□ -0.4
CLIP4-204ENST00000404424 ZNF594Q96JF6 807 aaPredicted RBP12.54□□□□□ -0.4
CLIP4-204ENST00000404424 A1BGP04217 495 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 TNNT1P13805 278 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 FDPSP14324 419 aaKnown RBP12.53□□□□□ -0.4
CLIP4-204ENST00000404424 FOSBP53539 338 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 CCDC144BQ3MJ40 725 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 TTC39AQ5SRH9 613 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 CADPS2Q86UW7 1296 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 CCDC144CPQ8IYA2 1237 aa12.53□□□□□ -0.4
CLIP4-204ENST00000404424 FMR1NBQ8N0W7 255 aaPredicted RBP12.53□□□□□ -0.4
CLIP4-204ENST00000404424 KCNG4Q8TDN1 519 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms