RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 EVI5LQ96CN4 794 aa11.34□□□□□ -0.59
PTPRM-203ENST00000400060 TFIP11Q9UBB9 837 aaKnown RBP11.34□□□□□ -0.59
PTPRM-203ENST00000400060 AKR1B15C9JRZ8 316 aaPredicted RBP11.33□□□□□ -0.6
PTPRM-203ENST00000400060 ELF1P32519 619 aa11.33□□□□□ -0.6
PTPRM-203ENST00000400060 AK2P54819 239 aa11.33□□□□□ -0.6
PTPRM-203ENST00000400060 CRYMQ14894 314 aa11.33□□□□□ -0.6
PTPRM-203ENST00000400060 CPLX4Q7Z7G2 160 aa11.33□□□□□ -0.6
PTPRM-203ENST00000400060 GBP7Q8N8V2 638 aaPredicted RBP11.33□□□□□ -0.6
PTPRM-203ENST00000400060 BCAS4Q8TDM0 211 aa11.33□□□□□ -0.6
PTPRM-203ENST00000400060 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.33□□□□□ -0.6
PTPRM-203ENST00000400060 ZNF608Q9ULD9 1512 aaPredicted RBP11.33□□□□□ -0.6
PTPRM-203ENST00000400060 SYNMO15061 1565 aa11.33□□□□□ -0.6
PTPRM-203ENST00000400060 LRRD1A4D1F6 860 aa11.33□□□□□ -0.6
PTPRM-203ENST00000400060 TBC1D31Q96DN5 1066 aa11.33□□□□□ -0.6
PTPRM-203ENST00000400060 SMARCA5O60264 1052 aaPredicted RBP11.33□□□□□ -0.6
PTPRM-203ENST00000400060 PLA2G4DQ86XP0 818 aa11.33□□□□□ -0.6
PTPRM-203ENST00000400060 TRIM4Q9C037 500 aa11.33□□□□□ -0.6
PTPRM-203ENST00000400060 RAPGEF6Q8TEU7 1601 aa11.33□□□□□ -0.6
PTPRM-203ENST00000400060 RUFY4Q6ZNE9 571 aa11.33□□□□□ -0.6
PTPRM-203ENST00000400060 IQUBQ8NA54 791 aa11.33□□□□□ -0.6
PTPRM-203ENST00000400060 P3H4Q92791 437 aa11.33□□□□□ -0.6
PTPRM-203ENST00000400060 TACC1O75410 805 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 NLRP12P59046 1061 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 APOBRQ0VD83 1088 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 ZNF365Q70YC5 407 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 PZPP20742 1482 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 MBD5Q9P267 1494 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 ZFYP08048 801 aaPredicted RBP11.32□□□□□ -0.6
PTPRM-203ENST00000400060 NFXL1Q6ZNB6 911 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 CACNA2D3Q8IZS8 1091 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 TCHPQ9BT92 498 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 NUP153P49790 1475 aaKnown RBP11.32□□□□□ -0.6
PTPRM-203ENST00000400060 ERICH2A1L162 156 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 RWDD2BP57060 319 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 FANCCQ00597 558 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 MICAL1Q8TDZ2 1067 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 TBC1D22AQ8WUA7 517 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 CACTINQ8WUQ7 758 aaKnown RBP11.32□□□□□ -0.6
PTPRM-203ENST00000400060 CDK19Q9BWU1 502 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
PTPRM-203ENST00000400060 SHANK2Q9UPX8 1470 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 ZEB2O60315 1214 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 PPFIBP2Q8ND30 876 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 VCX3BQ9H321 246 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 VCX3AQ9NNX9 186 aa11.32□□□□□ -0.6
PTPRM-203ENST00000400060 CWC25Q9NXE8 425 aaPredicted RBP11.32□□□□□ -0.6
PTPRM-203ENST00000400060 ZBTB7BO15156 539 aaPredicted RBP11.31□□□□□ -0.6
PTPRM-203ENST00000400060 CCT5P48643 541 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 MAP3K9P80192 1104 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 SWT1Q5T5J6 900 aaKnown RBP11.31□□□□□ -0.6
PTPRM-203ENST00000400060 FAM114A1Q8IWE2 563 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.31□□□□□ -0.61e-7■■□□□ 12.4
PTPRM-203ENST00000400060 C8orf76Q96K31 380 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 FAN1Q9Y2M0 1017 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 SLC4A2P04920 1241 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 CHMLP26374 656 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 KLHL10Q6JEL2 608 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 TCP11Q8WWU5 503 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 USP16Q9Y5T5 823 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 CCDC6Q16204 474 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 FKBP15Q5T1M5 1219 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 TAX1BP1Q86VP1 789 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 LEO1Q8WVC0 666 aaPredicted RBP11.31□□□□□ -0.6
PTPRM-203ENST00000400060 LLPHQ9BRT6 129 aaKnown RBP11.31□□□□□ -0.6
PTPRM-203ENST00000400060 JADE2Q9NQC1 790 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 BSDC1Q9NW68 430 aaPredicted RBP11.31□□□□□ -0.6
PTPRM-203ENST00000400060 CABP1Q9NZU7 370 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 CDC23Q9UJX2 597 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 RIPOR2Q9Y4F9 1068 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 ADGBQ8N7X0 1667 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 RNF40O75150 1001 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 EIF2S2P20042 333 aaKnown RBP11.31□□□□□ -0.6
PTPRM-203ENST00000400060 IFI16Q16666 785 aaKnown RBP11.31□□□□□ -0.6
PTPRM-203ENST00000400060 AMOTL1Q8IY63 956 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 TM6SF1Q9BZW5 370 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 LARSQ9P2J5 1176 aaKnown RBP11.31□□□□□ -0.6
PTPRM-203ENST00000400060 DNAJC5BQ9UF47 199 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 PPP2R2CQ9Y2T4 447 aa11.31□□□□□ -0.6
PTPRM-203ENST00000400060 PCK1P35558 622 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 SYKP43405 635 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 SEPT6Q14141 434 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 CCDC155Q8N6L0 562 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 DDX12PQ92771 950 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 ZBTB9Q96C00 473 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 MXRA7P84157 204 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 TMTC1Q8IUR5 882 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 NUTM2AQ8IVF1 878 aaPredicted RBP11.3□□□□□ -0.6
PTPRM-203ENST00000400060 TAOK3Q9H2K8 898 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 SEC31AO94979 1220 aaKnown RBP11.3□□□□□ -0.6
PTPRM-203ENST00000400060 RUFY3Q7L099 469 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 BRAPQ7Z569 592 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 RAB3IPQ96QF0 476 aaPredicted RBP11.3□□□□□ -0.6
PTPRM-203ENST00000400060 TESK2Q96S53 571 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 TTC36A6NLP5 189 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 STX10O60499 249 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 IFT20Q8IY31 132 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 TRIM22Q8IYM9 498 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 PUS7Q96PZ0 661 aaKnown RBP11.3□□□□□ -0.6
PTPRM-203ENST00000400060 PARD6BQ9BYG5 372 aa11.3□□□□□ -0.6
PTPRM-203ENST00000400060 ZNF330Q9Y3S2 320 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms