RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 PLCB3Q01970 1234 aa7.42□□□□□ -1.22
CMC1-202ENST00000396610 ENOX2Q16206 610 aaKnown RBP7.42□□□□□ -1.22
CMC1-202ENST00000396610 CEP135Q66GS9 1140 aa7.42□□□□□ -1.22
CMC1-202ENST00000396610 ADAMTSL4Q6UY14 1074 aa7.42□□□□□ -1.22
CMC1-202ENST00000396610 GALNT12Q8IXK2 581 aa7.42□□□□□ -1.22
CMC1-202ENST00000396610 SETDB2Q96T68 719 aa7.42□□□□□ -1.22
CMC1-202ENST00000396610 DNAJC25Q9H1X3 360 aa7.42□□□□□ -1.22
CMC1-202ENST00000396610 DZANK1Q9NVP4 752 aa7.42□□□□□ -1.22
CMC1-202ENST00000396610 GNB5O14775 395 aa7.41□□□□□ -1.22
CMC1-202ENST00000396610 SMNDC1O75940 238 aaKnown RBP eCLIP7.41□□□□□ -1.22
CMC1-202ENST00000396610 GDF6Q6KF10 455 aaPredicted RBP7.41□□□□□ -1.22
CMC1-202ENST00000396610 CCDC74AQ96AQ1 378 aa7.41□□□□□ -1.22
CMC1-202ENST00000396610 OSMRQ99650 979 aa7.41□□□□□ -1.22
CMC1-202ENST00000396610 SUV39H2Q9H5I1 410 aa7.41□□□□□ -1.22
CMC1-202ENST00000396610 NFKBIEO00221 500 aa7.4□□□□□ -1.22
CMC1-202ENST00000396610 MFAP1P55081 439 aaKnown RBP7.4□□□□□ -1.22
CMC1-202ENST00000396610 PI16Q6UXB8 463 aa7.4□□□□□ -1.22
CMC1-202ENST00000396610 TTC9Q92623 222 aa7.4□□□□□ -1.22
CMC1-202ENST00000396610 LACRTQ9GZZ8 138 aa7.4□□□□□ -1.22
CMC1-202ENST00000396610 A0A1W2PP55 124 aa7.39□□□□□ -1.23
CMC1-202ENST00000396610 EPS8L3Q8TE67 593 aaKnown RBP7.39□□□□□ -1.23
CMC1-202ENST00000396610 SPOCK3Q9BQ16 436 aa7.39□□□□□ -1.23
CMC1-202ENST00000396610 WWC3Q9ULE0 1092 aa7.39□□□□□ -1.23
CMC1-202ENST00000396610 PDE2AO00408 941 aaPredicted RBP7.38□□□□□ -1.23
CMC1-202ENST00000396610 ALYREFQ86V81 257 aaKnown RBP7.38□□□□□ -1.23
CMC1-202ENST00000396610 TMEM102Q8N9M5 508 aaPredicted RBP7.38□□□□□ -1.23
CMC1-202ENST00000396610 POP1Q99575 1024 aaKnown RBP7.38□□□□□ -1.23
CMC1-202ENST00000396610 PLVAPQ9BX97 442 aa7.38□□□□□ -1.23
CMC1-202ENST00000396610 METTL12A8MUP2 240 aa7.37□□□□□ -1.23
CMC1-202ENST00000396610 FAM229AH3BQW9 127 aa7.37□□□□□ -1.23
CMC1-202ENST00000396610 ADAM23O75077 832 aa7.37□□□□□ -1.23
CMC1-202ENST00000396610 PTPRAP18433 802 aa7.37□□□□□ -1.23
CMC1-202ENST00000396610 BAG6P46379 1132 aa7.37□□□□□ -1.23
CMC1-202ENST00000396610 ATP2B2Q01814 1243 aa7.37□□□□□ -1.23
CMC1-202ENST00000396610 MSL1Q68DK7 614 aa7.37□□□□□ -1.23
CMC1-202ENST00000396610 WFDC8Q8IUA0 241 aa7.37□□□□□ -1.23
CMC1-202ENST00000396610 BHLHE41Q9C0J9 482 aaPredicted RBP7.37□□□□□ -1.23
CMC1-202ENST00000396610 PIK3R2O00459 728 aa7.36□□□□□ -1.23
CMC1-202ENST00000396610 GADD45BO75293 160 aaPredicted RBP7.36□□□□□ -1.23
CMC1-202ENST00000396610 LDHBP07195 334 aaKnown RBP7.36□□□□□ -1.23
CMC1-202ENST00000396610 COL8A1P27658 744 aa7.36□□□□□ -1.23
CMC1-202ENST00000396610 EAPPQ56P03 285 aaPredicted RBP7.36□□□□□ -1.23
CMC1-202ENST00000396610 KIAA0319Q5VV43 1072 aa7.36□□□□□ -1.23
CMC1-202ENST00000396610 DMRTC2Q8IXT2 367 aaPredicted RBP7.36□□□□□ -1.23
CMC1-202ENST00000396610 IL22RA1Q8N6P7 574 aa7.36□□□□□ -1.23
CMC1-202ENST00000396610 ASAP3Q8TDY4 903 aa7.36□□□□□ -1.23
CMC1-202ENST00000396610 NXPE3Q969Y0 559 aa7.36□□□□□ -1.23
CMC1-202ENST00000396610 TCF12Q99081 682 aa7.36□□□□□ -1.23
CMC1-202ENST00000396610 EHD4Q9H223 541 aa7.36□□□□□ -1.23
CMC1-202ENST00000396610 LIN7BQ9HAP6 207 aa7.36□□□□□ -1.23
CMC1-202ENST00000396610 SH2B1Q9NRF2 756 aaPredicted RBP7.36□□□□□ -1.23
CMC1-202ENST00000396610 NOP53Q9NZM5 478 aaKnown RBP7.36□□□□□ -1.23
CMC1-202ENST00000396610 EPHA1P21709 976 aa7.35□□□□□ -1.23
CMC1-202ENST00000396610 CDC27P30260 824 aa7.35□□□□□ -1.23
CMC1-202ENST00000396610 CDC25BP30305 580 aa7.35□□□□□ -1.23
CMC1-202ENST00000396610 GRM2Q14416 872 aa7.35□□□□□ -1.23
CMC1-202ENST00000396610 COL19A1Q14993 1142 aa7.35□□□□□ -1.23
CMC1-202ENST00000396610 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.35□□□□□ -1.23
CMC1-202ENST00000396610 TRAPPC3LQ5T215 181 aa7.35□□□□□ -1.23
CMC1-202ENST00000396610 TXNDC11Q6PKC3 985 aa7.35□□□□□ -1.23
CMC1-202ENST00000396610 FBXO33Q7Z6M2 555 aa7.35□□□□□ -1.23
CMC1-202ENST00000396610 CCNJLQ8IV13 435 aa7.35□□□□□ -1.23
CMC1-202ENST00000396610 FBF1Q8TES7 1133 aa7.35□□□□□ -1.23
CMC1-202ENST00000396610 A0A0A0MRY4 1105 aa7.34□□□□□ -1.23
CMC1-202ENST00000396610 PROCP04070 461 aa7.34□□□□□ -1.23
CMC1-202ENST00000396610 GRIA4P48058 902 aa7.34□□□□□ -1.23
CMC1-202ENST00000396610 ALG1LQ6GMV1 187 aa7.34□□□□□ -1.23
CMC1-202ENST00000396610 ILDR2Q71H61 639 aa7.34□□□□□ -1.23
CMC1-202ENST00000396610 ABCB6Q9NP58 842 aa7.34□□□□□ -1.23
CMC1-202ENST00000396610 NLRP2Q9NX02 1062 aa7.34□□□□□ -1.23
CMC1-202ENST00000396610 SOX13Q9UN79 622 aa7.34□□□□□ -1.23
CMC1-202ENST00000396610 SPDYE3A6NKU9 549 aa7.33□□□□□ -1.24
CMC1-202ENST00000396610 PRPF40AO75400 957 aaKnown RBP7.33□□□□□ -1.24
CMC1-202ENST00000396610 ITGB2P05107 769 aa7.33□□□□□ -1.24
CMC1-202ENST00000396610 ERCC3P19447 782 aa7.33□□□□□ -1.24
CMC1-202ENST00000396610 TAGLNQ01995 201 aaKnown RBP7.33□□□□□ -1.24
CMC1-202ENST00000396610 SPRED3Q2MJR0 410 aa7.33□□□□□ -1.24
CMC1-202ENST00000396610 PRPF40BQ6NWY9 871 aaKnown RBP7.33□□□□□ -1.24
CMC1-202ENST00000396610 ADAM19Q9H013 955 aa7.33□□□□□ -1.24
CMC1-202ENST00000396610 MUC3BQ9H195 1237 aa7.33□□□□□ -1.24
CMC1-202ENST00000396610 RNF19AQ9NV58 838 aa7.33□□□□□ -1.24
CMC1-202ENST00000396610 PPME1Q9Y570 386 aa7.33□□□□□ -1.24
CMC1-202ENST00000396610 LINC01387J3KSC0 135 aa7.32□□□□□ -1.24
CMC1-202ENST00000396610 DEAF1O75398 565 aaPredicted RBP7.32□□□□□ -1.24
CMC1-202ENST00000396610 RAC1P63000 192 aa7.32□□□□□ -1.24
CMC1-202ENST00000396610 VN1R5Q7Z5H4 357 aa7.32□□□□□ -1.24
CMC1-202ENST00000396610 FMR1NBQ8N0W7 255 aaPredicted RBP7.32□□□□□ -1.24
CMC1-202ENST00000396610 CACTIN-AS1Q8N1I8 211 aa7.32□□□□□ -1.24
CMC1-202ENST00000396610 GLIS3Q8NEA6 775 aa7.32□□□□□ -1.24
CMC1-202ENST00000396610 BSNDQ8WZ55 320 aa7.32□□□□□ -1.24
CMC1-202ENST00000396610 DUSP9Q99956 384 aaKnown RBP7.32□□□□□ -1.24
CMC1-202ENST00000396610 CARD10Q9BWT7 1032 aa7.32□□□□□ -1.24
CMC1-202ENST00000396610 A0A096LPE4 126 aa7.31□□□□□ -1.24
CMC1-202ENST00000396610 A0A1W2PPZ6 126 aa7.31□□□□□ -1.24
CMC1-202ENST00000396610 FAM177BA6PVY3 158 aa7.31□□□□□ -1.24
CMC1-202ENST00000396610 H3BRJ5 948 aa7.31□□□□□ -1.24
CMC1-202ENST00000396610 PRRT3Q5FWE3 981 aa7.31□□□□□ -1.24
CMC1-202ENST00000396610 NXPE4Q6UWF7 544 aa7.31□□□□□ -1.24
CMC1-202ENST00000396610 BCO2Q9BYV7 579 aa7.31□□□□□ -1.24
CMC1-202ENST00000396610 TRAK1Q9UPV9 953 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms