RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 GOLGA8FQ08AF8 430 aa21.14■□□□□ 0.97
HERPUD2-202ENST00000396081 GOLGA8DPQ0D2H9 430 aa21.14■□□□□ 0.97
HERPUD2-202ENST00000396081 FMR1NBQ8N0W7 255 aaPredicted RBP21.14■□□□□ 0.97
HERPUD2-202ENST00000396081 USPL1Q5W0Q7 1092 aa21.13■□□□□ 0.97
HERPUD2-202ENST00000396081 ZCCHC17Q9NP64 241 aaKnown RBP21.13■□□□□ 0.97
HERPUD2-202ENST00000396081 SLC3A2P08195 630 aaKnown RBP21.13■□□□□ 0.97
HERPUD2-202ENST00000396081 CCDC93Q567U6 631 aa21.13■□□□□ 0.97
HERPUD2-202ENST00000396081 NBPF6Q5VWK0 638 aa21.13■□□□□ 0.97
HERPUD2-202ENST00000396081 PLCD3Q8N3E9 789 aa21.13■□□□□ 0.97
HERPUD2-202ENST00000396081 ZBTB9Q96C00 473 aa21.13■□□□□ 0.97
HERPUD2-202ENST00000396081 NBPF4Q96M43 638 aa21.13■□□□□ 0.97
HERPUD2-202ENST00000396081 CRYBG1Q9Y4K1 1723 aa21.13■□□□□ 0.97
HERPUD2-202ENST00000396081 SETD1BQ9UPS6 1966 aaKnown RBP21.13■□□□□ 0.97
HERPUD2-202ENST00000396081 CAPN2P17655 700 aa21.13■□□□□ 0.97
HERPUD2-202ENST00000396081 DHX32Q7L7V1 743 aaKnown RBP21.13■□□□□ 0.97
HERPUD2-202ENST00000396081 LLPHQ9BRT6 129 aaKnown RBP21.13■□□□□ 0.97
HERPUD2-202ENST00000396081 DBNLQ9UJU6 430 aaKnown RBP21.13■□□□□ 0.97
HERPUD2-202ENST00000396081 MCMDC2Q4G0Z9 681 aa21.12■□□□□ 0.97
HERPUD2-202ENST00000396081 ORC3Q9UBD5 711 aaPredicted RBP21.12■□□□□ 0.97
HERPUD2-202ENST00000396081 AMOTL2Q9Y2J4 779 aa21.12■□□□□ 0.97
HERPUD2-202ENST00000396081 ATP1A3P13637 1013 aa21.12■□□□□ 0.97
HERPUD2-202ENST00000396081 CCDC34Q96HJ3 373 aa21.12■□□□□ 0.97
HERPUD2-202ENST00000396081 UTP14AQ9BVJ6 771 aaKnown RBP21.12■□□□□ 0.97
HERPUD2-202ENST00000396081 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.11■□□□□ 0.97
HERPUD2-202ENST00000396081 DDX58O95786 925 aaKnown RBP21.11■□□□□ 0.97
HERPUD2-202ENST00000396081 SERPINC1P01008 464 aa21.11■□□□□ 0.97
HERPUD2-202ENST00000396081 MYL6BP14649 208 aa21.11■□□□□ 0.97
HERPUD2-202ENST00000396081 FANCCQ00597 558 aa21.11■□□□□ 0.97
HERPUD2-202ENST00000396081 TFCP2Q12800 502 aa21.11■□□□□ 0.97
HERPUD2-202ENST00000396081 RAB11FIP4Q86YS3 637 aa21.11■□□□□ 0.97
HERPUD2-202ENST00000396081 CLIC4Q9Y696 253 aa21.11■□□□□ 0.97
HERPUD2-202ENST00000396081 LTKP29376 864 aa21.1■□□□□ 0.97
HERPUD2-202ENST00000396081 ILDR1Q86SU0 546 aaPredicted RBP21.1■□□□□ 0.97
HERPUD2-202ENST00000396081 LRRC59Q96AG4 307 aaKnown RBP21.1■□□□□ 0.97
HERPUD2-202ENST00000396081 TRIM34Q9BYJ4 488 aa21.1■□□□□ 0.97
HERPUD2-202ENST00000396081 KCND1Q9NSA2 647 aa21.1■□□□□ 0.97
HERPUD2-202ENST00000396081 A0A0G2JLW4 131 aa21.1■□□□□ 0.97
HERPUD2-202ENST00000396081 EPHA10Q5JZY3 1008 aa21.1■□□□□ 0.97
HERPUD2-202ENST00000396081 DBNDD2Q9BQY9 259 aa21.1■□□□□ 0.97
HERPUD2-202ENST00000396081 FMN2Q9NZ56 1722 aa21.1■□□□□ 0.97
HERPUD2-202ENST00000396081 CHD2O14647 1828 aaKnown RBP21.1■□□□□ 0.97
HERPUD2-202ENST00000396081 FAM69CQ0P6D2 419 aa21.1■□□□□ 0.97
HERPUD2-202ENST00000396081 CFAP100Q494V2 611 aa21.1■□□□□ 0.97
HERPUD2-202ENST00000396081 ADALQ6DHV7 355 aa21.1■□□□□ 0.97
HERPUD2-202ENST00000396081 CEMIPQ8WUJ3 1361 aa21.1■□□□□ 0.97
HERPUD2-202ENST00000396081 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.09■□□□□ 0.97
HERPUD2-202ENST00000396081 EVCP57679 992 aa21.09■□□□□ 0.97
HERPUD2-202ENST00000396081 CREBRFQ8IUR6 639 aa21.09■□□□□ 0.97
HERPUD2-202ENST00000396081 ST5P78524 1137 aa21.09■□□□□ 0.97
HERPUD2-202ENST00000396081 NALCNQ8IZF0 1738 aa21.09■□□□□ 0.97
HERPUD2-202ENST00000396081 LRRC37A3O60309 1634 aa21.08■□□□□ 0.97
HERPUD2-202ENST00000396081 HSP90AA4PQ58FG1 418 aa21.08■□□□□ 0.97
HERPUD2-202ENST00000396081 ZNF609O15014 1411 aa21.08■□□□□ 0.97
HERPUD2-202ENST00000396081 ATP5JP18859 108 aa21.08■□□□□ 0.97
HERPUD2-202ENST00000396081 NEXNQ0ZGT2 675 aa21.08■□□□□ 0.97
HERPUD2-202ENST00000396081 C1orf141Q5JVX7 400 aa21.08■□□□□ 0.97
HERPUD2-202ENST00000396081 UBASH3AP57075 661 aa21.08■□□□□ 0.96
HERPUD2-202ENST00000396081 TNNI3KQ59H18 835 aa21.08■□□□□ 0.96
HERPUD2-202ENST00000396081 GJB4Q9NTQ9 266 aa21.08■□□□□ 0.96
HERPUD2-202ENST00000396081 FPGT-TNNI3KV9GXZ4 949 aa21.08■□□□□ 0.96
HERPUD2-202ENST00000396081 ZNF202O95125 648 aa21.07■□□□□ 0.96
HERPUD2-202ENST00000396081 FAM193AP78312 1265 aa21.07■□□□□ 0.96
HERPUD2-202ENST00000396081 SPTLC2O15270 562 aa21.07■□□□□ 0.96
HERPUD2-202ENST00000396081 ZRANB2O95218 330 aaKnown RBP eCLIP21.07■□□□□ 0.96
HERPUD2-202ENST00000396081 HMGB1P09429 215 aaKnown RBP21.07■□□□□ 0.96
HERPUD2-202ENST00000396081 OAS2P29728 719 aaKnown RBP21.07■□□□□ 0.96
HERPUD2-202ENST00000396081 ATL3Q6DD88 541 aa21.07■□□□□ 0.96
HERPUD2-202ENST00000396081 KRBA2Q6ZNG9 492 aa21.07■□□□□ 0.96
HERPUD2-202ENST00000396081 NEUROD6Q96NK8 337 aa21.07■□□□□ 0.96
HERPUD2-202ENST00000396081 MYD88Q99836 296 aa21.07■□□□□ 0.96
HERPUD2-202ENST00000396081 GPHNQ9NQX3 736 aaPredicted RBP21.07■□□□□ 0.96
HERPUD2-202ENST00000396081 IGKV5-2P06315 115 aa21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 MARCKSP29966 332 aaPredicted RBP21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 RAD51AP2Q09MP3 1159 aa21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 SYNE3Q6ZMZ3 975 aa21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 LINC00301Q8NCQ3 95 aa21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 DPF2Q92785 391 aa21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 TMEM2Q9UHN6 1383 aa21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 GOLIM4O00461 696 aa21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 CCP110O43303 1012 aa21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 PDIA3P30101 505 aaKnown RBP21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 NLRP12P59046 1061 aa21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 PDILTQ8N807 584 aa21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 SMARCE1Q969G3 411 aa21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 TADA3O75528 432 aa21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 GYS2P54840 703 aa21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 C8orf76Q96K31 380 aa21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 RTEL1Q9NZ71 1219 aa21.06■□□□□ 0.96
HERPUD2-202ENST00000396081 N4BP2Q86UW6 1770 aaPredicted RBP21.05■□□□□ 0.96
HERPUD2-202ENST00000396081 ZFP91Q96JP5 570 aaPredicted RBP21.05■□□□□ 0.96
HERPUD2-202ENST00000396081 GNG11P61952 73 aa21.05■□□□□ 0.96
HERPUD2-202ENST00000396081 PLEKHO1Q53GL0 409 aaPredicted RBP21.05■□□□□ 0.96
HERPUD2-202ENST00000396081 CARMIL3Q8ND23 1372 aa21.05■□□□□ 0.96
HERPUD2-202ENST00000396081 TULP2O00295 520 aa21.04■□□□□ 0.96
HERPUD2-202ENST00000396081 NCAPHQ15003 741 aa21.04■□□□□ 0.96
HERPUD2-202ENST00000396081 LRRFIP1Q32MZ4 808 aaKnown RBP21.04■□□□□ 0.96
HERPUD2-202ENST00000396081 AKAP4Q5JQC9 854 aa21.04■□□□□ 0.96
HERPUD2-202ENST00000396081 PHLPP2Q6ZVD8 1323 aa21.04■□□□□ 0.96
HERPUD2-202ENST00000396081 PTPRUQ92729 1446 aa21.04■□□□□ 0.96
HERPUD2-202ENST00000396081 ADAMTS13Q76LX8 1427 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms