RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 UBR2Q8IWV8 1755 aa23.09■■□□□ 1.29
RCCD1-201ENST00000394258 SYTL4Q96C24 671 aaPredicted RBP23.08■■□□□ 1.29
RCCD1-201ENST00000394258 SCAND2PQ9GZW5 306 aaPredicted RBP23.08■■□□□ 1.29
RCCD1-201ENST00000394258 ATG3Q9NT62 314 aa23.08■■□□□ 1.29
RCCD1-201ENST00000394258 KIAA2012Q0VF49 1180 aa23.08■■□□□ 1.29
RCCD1-201ENST00000394258 PRDM10Q9NQV6 1147 aa23.08■■□□□ 1.29
RCCD1-201ENST00000394258 IFIT5Q13325 482 aaKnown RBP23.07■■□□□ 1.28
RCCD1-201ENST00000394258 PDIA4P13667 645 aaKnown RBP23.07■■□□□ 1.28
RCCD1-201ENST00000394258 NUP62CLQ9H1M0 184 aa23.07■■□□□ 1.28
RCCD1-201ENST00000394258 PRDM4Q9UKN5 801 aa23.07■■□□□ 1.28
RCCD1-201ENST00000394258 TNS2Q63HR2 1409 aa23.07■■□□□ 1.28
RCCD1-201ENST00000394258 HMGB1P09429 215 aaKnown RBP23.06■■□□□ 1.28
RCCD1-201ENST00000394258 GPHNQ9NQX3 736 aaPredicted RBP23.06■■□□□ 1.28
RCCD1-201ENST00000394258 ZAP70P43403 619 aa23.06■■□□□ 1.28
RCCD1-201ENST00000394258 ELP1O95163 1332 aa23.06■■□□□ 1.28
RCCD1-201ENST00000394258 STARD3NLO95772 234 aa23.05■■□□□ 1.28
RCCD1-201ENST00000394258 GUCY1B3Q02153 619 aa23.05■■□□□ 1.28
RCCD1-201ENST00000394258 BICD2Q8TD16 824 aa23.05■■□□□ 1.28
RCCD1-201ENST00000394258 PFKFB2O60825 505 aa23.05■■□□□ 1.28
RCCD1-201ENST00000394258 CTDNEP1O95476 244 aa23.05■■□□□ 1.28
RCCD1-201ENST00000394258 PCCAP05165 728 aaPredicted RBP23.05■■□□□ 1.28
RCCD1-201ENST00000394258 CCDC192P0DO97 292 aa23.05■■□□□ 1.28
RCCD1-201ENST00000394258 EXOSC10Q01780 885 aaKnown RBP23.05■■□□□ 1.28
RCCD1-201ENST00000394258 RESTQ13127 1097 aa23.05■■□□□ 1.28
RCCD1-201ENST00000394258 SPC24Q8NBT2 197 aa23.05■■□□□ 1.28
RCCD1-201ENST00000394258 NSUN7Q8NE18 718 aaKnown RBP23.05■■□□□ 1.28
RCCD1-201ENST00000394258 PGBD1Q96JS3 809 aa23.05■■□□□ 1.28
RCCD1-201ENST00000394258 MAP3K11Q16584 847 aa23.05■■□□□ 1.28
RCCD1-201ENST00000394258 ZBTB38Q8NAP3 1195 aaPredicted RBP23.05■■□□□ 1.28
RCCD1-201ENST00000394258 FTOQ9C0B1 505 aaKnown RBP eCLIP23.05■■□□□ 1.28
RCCD1-201ENST00000394258 PTPDC1A2A3K4 754 aa23.04■■□□□ 1.28
RCCD1-201ENST00000394258 TNMDQ9H2S6 317 aa23.04■■□□□ 1.28
RCCD1-201ENST00000394258 AKAP2Q9Y2D5 859 aa23.04■■□□□ 1.28
RCCD1-201ENST00000394258 METTL24Q5JXM2 366 aa23.04■■□□□ 1.28
RCCD1-201ENST00000394258 GREM2Q9H772 168 aa23.04■■□□□ 1.28
RCCD1-201ENST00000394258 MRVI1Q9Y6F6 885 aa23.04■■□□□ 1.28
RCCD1-201ENST00000394258 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.03■■□□□ 1.28
RCCD1-201ENST00000394258 A0A0G2JS52 829 aa23.03■■□□□ 1.28
RCCD1-201ENST00000394258 NR1I2O75469 434 aa23.03■■□□□ 1.28
RCCD1-201ENST00000394258 LDHAL6AQ6ZMR3 332 aa23.03■■□□□ 1.28
RCCD1-201ENST00000394258 LUZP1Q86V48 1076 aa23.03■■□□□ 1.28
RCCD1-201ENST00000394258 TYRO3Q06418 890 aa23.03■■□□□ 1.28
RCCD1-201ENST00000394258 PUS7LQ9H0K6 701 aaKnown RBP23.03■■□□□ 1.28
RCCD1-201ENST00000394258 SHANK3Q9BYB0 1731 aa23.02■■□□□ 1.28
RCCD1-201ENST00000394258 ITGA6P23229 1130 aa23.02■■□□□ 1.28
RCCD1-201ENST00000394258 DNTTIP2Q5QJE6 756 aaKnown RBP23.02■■□□□ 1.28
RCCD1-201ENST00000394258 RAB11FIP4Q86YS3 637 aa23.02■■□□□ 1.28
RCCD1-201ENST00000394258 SMARCC2Q8TAQ2 1214 aa23.02■■□□□ 1.28
RCCD1-201ENST00000394258 TRIM28Q13263 835 aaKnown RBP23.02■■□□□ 1.28
RCCD1-201ENST00000394258 GIGYF2Q6Y7W6 1299 aaKnown RBP23.02■■□□□ 1.28
RCCD1-201ENST00000394258 SLC4A9Q96Q91 983 aa23.02■■□□□ 1.28
RCCD1-201ENST00000394258 MAP3K15Q6ZN16 1313 aa23.02■■□□□ 1.27
RCCD1-201ENST00000394258 LAMA4Q16363 1823 aa23.01■■□□□ 1.27
RCCD1-201ENST00000394258 PDIA3P30101 505 aaKnown RBP23.01■■□□□ 1.27
RCCD1-201ENST00000394258 TEX13AQ9BXU3 409 aaPredicted RBP23.01■■□□□ 1.27
RCCD1-201ENST00000394258 TBC1D2BQ9UPU7 963 aa23.01■■□□□ 1.27
RCCD1-201ENST00000394258 FOXP2O15409 715 aa23.01■■□□□ 1.27
RCCD1-201ENST00000394258 CSF1RP07333 972 aa23.01■■□□□ 1.27
RCCD1-201ENST00000394258 TERF1P54274 439 aa23.01■■□□□ 1.27
RCCD1-201ENST00000394258 ATP2B3Q16720 1220 aa23.01■■□□□ 1.27
RCCD1-201ENST00000394258 NLRP10Q86W26 655 aa23.01■■□□□ 1.27
RCCD1-201ENST00000394258 CNNM1Q9NRU3 951 aa23.01■■□□□ 1.27
RCCD1-201ENST00000394258 TOGARAM1Q9Y4F4 1720 aa23■■□□□ 1.27
RCCD1-201ENST00000394258 FGAP02671 866 aa23■■□□□ 1.27
RCCD1-201ENST00000394258 NOLC1Q14978 699 aaKnown RBP eCLIP23■■□□□ 1.275e-8■□□□□ 10.4
RCCD1-201ENST00000394258 TSC1Q92574 1164 aa23■■□□□ 1.27
RCCD1-201ENST00000394258 ZBTB1Q9Y2K1 713 aa23■■□□□ 1.27
RCCD1-201ENST00000394258 TTLL11Q8NHH1 800 aa23■■□□□ 1.27
RCCD1-201ENST00000394258 PIBF1Q8WXW3 757 aa23■■□□□ 1.27
RCCD1-201ENST00000394258 PAPPAQ13219 1627 aa23■■□□□ 1.27
RCCD1-201ENST00000394258 ANO6Q4KMQ2 910 aa22.99■■□□□ 1.27
RCCD1-201ENST00000394258 LLPHQ9BRT6 129 aaKnown RBP22.99■■□□□ 1.27
RCCD1-201ENST00000394258 TRMT112Q9UI30 125 aaKnown RBP22.99■■□□□ 1.27
RCCD1-201ENST00000394258 KCNF1Q9H3M0 494 aa22.99■■□□□ 1.27
RCCD1-201ENST00000394258 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.98■■□□□ 1.27
RCCD1-201ENST00000394258 ZSCAN16Q9H4T2 348 aaPredicted RBP22.98■■□□□ 1.27
RCCD1-201ENST00000394258 FAM177BA6PVY3 158 aa22.98■■□□□ 1.27
RCCD1-201ENST00000394258 MCAMP43121 646 aa22.98■■□□□ 1.27
RCCD1-201ENST00000394258 FAM200AQ8TCP9 573 aa22.98■■□□□ 1.27
RCCD1-201ENST00000394258 AGXT2Q9BYV1 514 aa22.98■■□□□ 1.27
RCCD1-201ENST00000394258 TAOK2Q9UL54 1235 aa22.98■■□□□ 1.27
RCCD1-201ENST00000394258 RIPOR2Q9Y4F9 1068 aa22.98■■□□□ 1.27
RCCD1-201ENST00000394258 IRS4O14654 1257 aaPredicted RBP22.97■■□□□ 1.27
RCCD1-201ENST00000394258 IMMTQ16891 758 aaKnown RBP22.97■■□□□ 1.27
RCCD1-201ENST00000394258 SASS6Q6UVJ0 657 aa22.97■■□□□ 1.27
RCCD1-201ENST00000394258 HELBQ8NG08 1087 aaPredicted RBP22.97■■□□□ 1.27
RCCD1-201ENST00000394258 CFAP45Q9UL16 551 aa22.97■■□□□ 1.27
RCCD1-201ENST00000394258 OTUD7BQ6GQQ9 843 aa22.97■■□□□ 1.27
RCCD1-201ENST00000394258 PLA2G12BQ9BX93 195 aa22.97■■□□□ 1.27
RCCD1-201ENST00000394258 CBX8Q9HC52 389 aa22.97■■□□□ 1.27
RCCD1-201ENST00000394258 PYCARDQ9ULZ3 195 aa22.97■■□□□ 1.27
RCCD1-201ENST00000394258 CYP19A1P11511 503 aaPredicted RBP22.96■■□□□ 1.27
RCCD1-201ENST00000394258 GPAA1O43292 621 aa22.96■■□□□ 1.27
RCCD1-201ENST00000394258 ADD1P35611 737 aaKnown RBP22.96■■□□□ 1.27
RCCD1-201ENST00000394258 HMGN5P82970 282 aaKnown RBP22.96■■□□□ 1.27
RCCD1-201ENST00000394258 LRRFIP1Q32MZ4 808 aaKnown RBP22.96■■□□□ 1.27
RCCD1-201ENST00000394258 CLSTN2Q9H4D0 955 aa22.96■■□□□ 1.27
RCCD1-201ENST00000394258 ZHX1Q9UKY1 873 aaPredicted RBP22.96■■□□□ 1.27
RCCD1-201ENST00000394258 ANKRD18BA2A2Z9 1011 aa22.95■■□□□ 1.27
RCCD1-201ENST00000394258 CTSWP56202 376 aa22.95■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms