RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 CD2APQ9Y5K6 639 aa29.63■■■□□ 2.33
LRFN4-202ENST00000393952 KLRK1P26718 216 aa29.62■■■□□ 2.33
LRFN4-202ENST00000393952 PHKA1P46020 1223 aa29.62■■■□□ 2.33
LRFN4-202ENST00000393952 CCDC102BQ68D86 513 aa29.62■■■□□ 2.33
LRFN4-202ENST00000393952 PODXL2Q9NZ53 605 aa29.61■■■□□ 2.33
LRFN4-202ENST00000393952 AK9Q5TCS8 1911 aa29.61■■■□□ 2.33
LRFN4-202ENST00000393952 TRIM6-TRIM34B2RNG4 842 aa29.6■■■□□ 2.33
LRFN4-202ENST00000393952 TTLL6Q8N841 843 aa29.6■■■□□ 2.33
LRFN4-202ENST00000393952 ZNF219Q9P2Y4 722 aaPredicted RBP29.6■■■□□ 2.33
LRFN4-202ENST00000393952 GGA1Q9UJY5 639 aa29.6■■■□□ 2.33
LRFN4-202ENST00000393952 UFL1O94874 794 aa29.6■■■□□ 2.33
LRFN4-202ENST00000393952 ATP2B4P23634 1241 aa29.6■■■□□ 2.33
LRFN4-202ENST00000393952 BCAMP50895 628 aa29.6■■■□□ 2.33
LRFN4-202ENST00000393952 GYG1P46976 350 aa29.59■■■□□ 2.33
LRFN4-202ENST00000393952 C7orf43Q8WVR3 580 aa29.59■■■□□ 2.33
LRFN4-202ENST00000393952 RILPL2Q969X0 211 aa29.59■■■□□ 2.33
LRFN4-202ENST00000393952 GPR101Q96P66 508 aaPredicted RBP29.59■■■□□ 2.33
LRFN4-202ENST00000393952 TMX4Q9H1E5 349 aaPredicted RBP29.59■■■□□ 2.33
LRFN4-202ENST00000393952 NDUFB9Q9Y6M9 179 aa29.59■■■□□ 2.33
LRFN4-202ENST00000393952 IRS2Q9Y4H2 1338 aa29.59■■■□□ 2.33
LRFN4-202ENST00000393952 SCARF1Q14162 830 aa29.58■■■□□ 2.33
LRFN4-202ENST00000393952 C8orf34Q49A92 452 aa29.58■■■□□ 2.33
LRFN4-202ENST00000393952 TBC1D16Q8TBP0 767 aa29.58■■■□□ 2.33
LRFN4-202ENST00000393952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.58■■■□□ 2.33
LRFN4-202ENST00000393952 HAUS7Q99871 368 aa29.58■■■□□ 2.33
LRFN4-202ENST00000393952 BRCA1P38398 1863 aaKnown RBP29.58■■■□□ 2.33
LRFN4-202ENST00000393952 AKAP11Q9UKA4 1901 aa29.58■■■□□ 2.33
LRFN4-202ENST00000393952 DUOX1Q9NRD9 1551 aa29.58■■■□□ 2.33
LRFN4-202ENST00000393952 MPNDQ8N594 471 aa29.57■■■□□ 2.32
LRFN4-202ENST00000393952 DNAJC2Q99543 621 aaKnown RBP29.57■■■□□ 2.32
LRFN4-202ENST00000393952 POLLQ9UGP5 575 aa29.57■■■□□ 2.32
LRFN4-202ENST00000393952 UQCRFS1P1P0C7P4 283 aa29.56■■■□□ 2.32
LRFN4-202ENST00000393952 ARID4AP29374 1257 aaPredicted RBP29.56■■■□□ 2.32
LRFN4-202ENST00000393952 TXNRD3Q86VQ6 643 aa29.56■■■□□ 2.32
LRFN4-202ENST00000393952 ZNF512BQ96KM6 892 aaPredicted RBP29.56■■■□□ 2.32
LRFN4-202ENST00000393952 FAM84BQ96KN1 310 aaPredicted RBP29.56■■■□□ 2.32
LRFN4-202ENST00000393952 CAVIN4Q5BKX8 364 aa29.56■■■□□ 2.32
LRFN4-202ENST00000393952 DPP8Q6V1X1 898 aaPredicted RBP29.56■■■□□ 2.32
LRFN4-202ENST00000393952 EDC3Q96F86 508 aaKnown RBP29.56■■■□□ 2.32
LRFN4-202ENST00000393952 PIM2Q9P1W9 311 aa29.56■■■□□ 2.32
LRFN4-202ENST00000393952 C6orf229H3BNL8 230 aa29.55■■■□□ 2.32
LRFN4-202ENST00000393952 MCAMP43121 646 aa29.55■■■□□ 2.32
LRFN4-202ENST00000393952 CNTROBQ8N137 903 aa29.55■■■□□ 2.32
LRFN4-202ENST00000393952 SNRKQ9NRH2 765 aa29.55■■■□□ 2.32
LRFN4-202ENST00000393952 SOCS7O14512 581 aa29.54■■■□□ 2.32
LRFN4-202ENST00000393952 C21orf2O43822 256 aa29.54■■■□□ 2.32
LRFN4-202ENST00000393952 PI16Q6UXB8 463 aa29.54■■■□□ 2.32
LRFN4-202ENST00000393952 FBXO33Q7Z6M2 555 aa29.54■■■□□ 2.32
LRFN4-202ENST00000393952 WWC3Q9ULE0 1092 aa29.54■■■□□ 2.32
LRFN4-202ENST00000393952 C15orf52Q6ZUT6 534 aaKnown RBP29.53■■■□□ 2.32
LRFN4-202ENST00000393952 EVI5LQ96CN4 794 aa29.53■■■□□ 2.32
LRFN4-202ENST00000393952 CDC45O75419 566 aa29.52■■■□□ 2.32
LRFN4-202ENST00000393952 VPS37DQ86XT2 251 aa29.52■■■□□ 2.32
LRFN4-202ENST00000393952 NLGN2Q8NFZ4 835 aa29.52■■■□□ 2.32
LRFN4-202ENST00000393952 SNED1Q8TER0 1413 aa29.52■■■□□ 2.32
LRFN4-202ENST00000393952 HIBADHP31937 336 aaKnown RBP29.52■■■□□ 2.32
LRFN4-202ENST00000393952 ZAP70P43403 619 aa29.52■■■□□ 2.32
LRFN4-202ENST00000393952 FKBP4Q02790 459 aaKnown RBP eCLIP29.52■■■□□ 2.32
LRFN4-202ENST00000393952 RASGRF1Q13972 1273 aa29.52■■■□□ 2.32
LRFN4-202ENST00000393952 CC2D2BQ6DHV5 1058 aa29.52■■■□□ 2.32
LRFN4-202ENST00000393952 IQSEC3Q9UPP2 1182 aaPredicted RBP29.52■■■□□ 2.32
LRFN4-202ENST00000393952 GOLIM4O00461 696 aa29.51■■■□□ 2.31
LRFN4-202ENST00000393952 BACH2Q9BYV9 841 aa29.51■■■□□ 2.31
LRFN4-202ENST00000393952 GNL3LQ9NVN8 582 aaKnown RBP29.51■■■□□ 2.31
LRFN4-202ENST00000393952 PAG1Q9NWQ8 432 aa29.51■■■□□ 2.31
LRFN4-202ENST00000393952 HMG20BQ9P0W2 317 aa29.51■■■□□ 2.31
LRFN4-202ENST00000393952 MED23Q9ULK4 1368 aa29.5■■■□□ 2.31
LRFN4-202ENST00000393952 DALRD3Q5D0E6 543 aaKnown RBP29.5■■■□□ 2.31
LRFN4-202ENST00000393952 TBC1D9Q6ZT07 1266 aa29.5■■■□□ 2.31
LRFN4-202ENST00000393952 ANTXR1Q9H6X2 564 aa29.49■■■□□ 2.31
LRFN4-202ENST00000393952 MYH13Q9UKX3 1938 aa29.48■■■□□ 2.31
LRFN4-202ENST00000393952 SPATA5Q8NB90 893 aa29.48■■■□□ 2.31
LRFN4-202ENST00000393952 CCDC93Q567U6 631 aa29.47■■■□□ 2.31
LRFN4-202ENST00000393952 FSD1Q9BTV5 496 aa29.47■■■□□ 2.31
LRFN4-202ENST00000393952 FHDC1Q9C0D6 1143 aaPredicted RBP29.47■■■□□ 2.31
LRFN4-202ENST00000393952 COL1A1P02452 1464 aaPredicted RBP29.47■■■□□ 2.31
LRFN4-202ENST00000393952 ZNF804AQ7Z570 1209 aa29.47■■■□□ 2.31
LRFN4-202ENST00000393952 RIMBP2O15034 1052 aa29.46■■■□□ 2.31
LRFN4-202ENST00000393952 RTFDC1Q9BY42 306 aaPredicted RBP29.46■■■□□ 2.31
LRFN4-202ENST00000393952 CYP2E1P05181 493 aaPredicted RBP29.45■■■□□ 2.31
LRFN4-202ENST00000393952 CHMLP26374 656 aa29.45■■■□□ 2.31
LRFN4-202ENST00000393952 KBTBD3Q8NAB2 608 aa29.44■■■□□ 2.3
LRFN4-202ENST00000393952 EYA3Q99504 573 aa29.44■■■□□ 2.3
LRFN4-202ENST00000393952 ZC3H12CQ9C0D7 883 aaKnown RBP29.44■■■□□ 2.3
LRFN4-202ENST00000393952 SEMA3EO15041 775 aa29.43■■■□□ 2.3
LRFN4-202ENST00000393952 WASHC4Q2M389 1173 aa29.43■■■□□ 2.3
LRFN4-202ENST00000393952 GRIPAP1Q4V328 841 aa29.43■■■□□ 2.3
LRFN4-202ENST00000393952 RTKN2Q8IZC4 609 aa29.43■■■□□ 2.3
LRFN4-202ENST00000393952 DENND2AQ9ULE3 1009 aa29.43■■■□□ 2.3
LRFN4-202ENST00000393952 BCS1LQ9Y276 419 aa29.43■■■□□ 2.3
LRFN4-202ENST00000393952 MYO5AQ9Y4I1 1855 aaKnown RBP29.43■■■□□ 2.3
LRFN4-202ENST00000393952 FRAT2O75474 233 aaPredicted RBP29.43■■■□□ 2.3
LRFN4-202ENST00000393952 SOGA3Q5TF21 947 aa29.43■■■□□ 2.3
LRFN4-202ENST00000393952 CD209Q9NNX6 404 aa29.43■■■□□ 2.3
LRFN4-202ENST00000393952 PIH1D3Q9NQM4 214 aaKnown RBP29.43■■■□□ 2.3
LRFN4-202ENST00000393952 CASC1Q6TDU7 716 aa29.42■■■□□ 2.3
LRFN4-202ENST00000393952 TDRD7Q8NHU6 1098 aaKnown RBP29.42■■■□□ 2.3
LRFN4-202ENST00000393952 SEC24BO95487 1268 aa29.41■■■□□ 2.3
LRFN4-202ENST00000393952 ZBTB22O15209 634 aa29.4■■■□□ 2.3
LRFN4-202ENST00000393952 TTF1Q15361 905 aaPredicted RBP29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms