RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 VPS53Q5VIR6 699 aa26.58■■□□□ 1.85
HMGA2-203ENST00000393578 ZNF772Q68DY9 489 aaPredicted RBP26.58■■□□□ 1.85
HMGA2-203ENST00000393578 C3orf67Q6ZVT6 689 aa26.58■■□□□ 1.85
HMGA2-203ENST00000393578 AKAP11Q9UKA4 1901 aa26.57■■□□□ 1.84
HMGA2-203ENST00000393578 RUFY3Q7L099 469 aa26.57■■□□□ 1.84
HMGA2-203ENST00000393578 ZGPATQ8N5A5 531 aaKnown RBP26.57■■□□□ 1.84
HMGA2-203ENST00000393578 TTF1Q15361 905 aaPredicted RBP26.57■■□□□ 1.84
HMGA2-203ENST00000393578 PI16Q6UXB8 463 aa26.57■■□□□ 1.84
HMGA2-203ENST00000393578 ANKRD18AQ8IVF6 992 aa26.57■■□□□ 1.84
HMGA2-203ENST00000393578 TNPO1Q92973 898 aaKnown RBP26.57■■□□□ 1.84
HMGA2-203ENST00000393578 PHF14O94880 888 aa26.56■■□□□ 1.84
HMGA2-203ENST00000393578 MCM4P33991 863 aa26.56■■□□□ 1.84
HMGA2-203ENST00000393578 PHKA1P46020 1223 aa26.56■■□□□ 1.84
HMGA2-203ENST00000393578 AK2P54819 239 aa26.56■■□□□ 1.84
HMGA2-203ENST00000393578 RBM6P78332 1123 aaKnown RBP26.56■■□□□ 1.84
HMGA2-203ENST00000393578 NUCB2P80303 420 aa26.56■■□□□ 1.84
HMGA2-203ENST00000393578 NOL8Q76FK4 1167 aaKnown RBP26.56■■□□□ 1.84
HMGA2-203ENST00000393578 DSCC1Q9BVC3 393 aa26.56■■□□□ 1.84
HMGA2-203ENST00000393578 TRIM37O94972 964 aa26.55■■□□□ 1.84
HMGA2-203ENST00000393578 CHRNDQ07001 517 aa26.55■■□□□ 1.84
HMGA2-203ENST00000393578 SLFNL1Q499Z3 407 aa26.55■■□□□ 1.84
HMGA2-203ENST00000393578 NLRP3Q96P20 1036 aa26.55■■□□□ 1.84
HMGA2-203ENST00000393578 PDRG1Q9NUG6 133 aa26.55■■□□□ 1.84
HMGA2-203ENST00000393578 LIMCH1Q9UPQ0 1083 aa26.55■■□□□ 1.84
HMGA2-203ENST00000393578 MAST3O60307 1309 aa26.55■■□□□ 1.84
HMGA2-203ENST00000393578 CASZ1Q86V15 1759 aa26.55■■□□□ 1.84
HMGA2-203ENST00000393578 KRT32Q14532 448 aa26.55■■□□□ 1.84
HMGA2-203ENST00000393578 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.55■■□□□ 1.84
HMGA2-203ENST00000393578 BSDC1Q9NW68 430 aaPredicted RBP26.55■■□□□ 1.84
HMGA2-203ENST00000393578 CPA1P15085 419 aa26.54■■□□□ 1.84
HMGA2-203ENST00000393578 EP400Q96L91 3159 aa26.53■■□□□ 1.84
HMGA2-203ENST00000393578 CYP2E1P05181 493 aaPredicted RBP26.53■■□□□ 1.84
HMGA2-203ENST00000393578 HMGB2P26583 209 aaKnown RBP26.53■■□□□ 1.84
HMGA2-203ENST00000393578 ZSCAN25Q6NSZ9 544 aa26.53■■□□□ 1.84
HMGA2-203ENST00000393578 OSBP2Q969R2 916 aa26.53■■□□□ 1.84
HMGA2-203ENST00000393578 COL4A1P02462 1669 aa26.53■■□□□ 1.84
HMGA2-203ENST00000393578 APPBP2Q92624 585 aa26.52■■□□□ 1.84
HMGA2-203ENST00000393578 CARMIL3Q8ND23 1372 aa26.52■■□□□ 1.84
HMGA2-203ENST00000393578 UBR3Q6ZT12 1888 aa26.51■■□□□ 1.84
HMGA2-203ENST00000393578 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.51■■□□□ 1.83
HMGA2-203ENST00000393578 GBP4Q96PP9 640 aa26.51■■□□□ 1.83
HMGA2-203ENST00000393578 M0R2C6 588 aa26.51■■□□□ 1.83
HMGA2-203ENST00000393578 SNAP23O00161 211 aa26.51■■□□□ 1.83
HMGA2-203ENST00000393578 HSPD1P10809 573 aaKnown RBP26.51■■□□□ 1.83
HMGA2-203ENST00000393578 WASHC4Q2M389 1173 aa26.51■■□□□ 1.83
HMGA2-203ENST00000393578 BLOC1S2Q6QNY1 142 aa26.51■■□□□ 1.83
HMGA2-203ENST00000393578 TAF6LQ9Y6J9 622 aa26.51■■□□□ 1.83
HMGA2-203ENST00000393578 MYH7P12883 1935 aa26.51■■□□□ 1.83
HMGA2-203ENST00000393578 ALDH8A1Q9H2A2 487 aaPredicted RBP26.5■■□□□ 1.83
HMGA2-203ENST00000393578 CLEC17AQ6ZS10 378 aa26.49■■□□□ 1.83
HMGA2-203ENST00000393578 SPATA5Q8NB90 893 aa26.49■■□□□ 1.83
HMGA2-203ENST00000393578 CYP21A2P08686 494 aa26.49■■□□□ 1.83
HMGA2-203ENST00000393578 NFIXQ14938 502 aa26.49■■□□□ 1.83
HMGA2-203ENST00000393578 RPS6KB1P23443 525 aa26.48■■□□□ 1.83
HMGA2-203ENST00000393578 CELF1Q92879 486 aaKnown RBP26.48■■□□□ 1.83
HMGA2-203ENST00000393578 ZSCAN31Q96LW9 406 aaPredicted RBP26.48■■□□□ 1.83
HMGA2-203ENST00000393578 PIH1D3Q9NQM4 214 aaKnown RBP26.48■■□□□ 1.83
HMGA2-203ENST00000393578 DDX11L8A8MPP1 907 aa26.47■■□□□ 1.83
HMGA2-203ENST00000393578 ADD2P35612 726 aa26.47■■□□□ 1.83
HMGA2-203ENST00000393578 MINPP1Q9UNW1 487 aa26.47■■□□□ 1.83
HMGA2-203ENST00000393578 RPS8P62241 208 aaKnown RBP26.47■■□□□ 1.83
HMGA2-203ENST00000393578 RASGRF1Q13972 1273 aa26.47■■□□□ 1.83
HMGA2-203ENST00000393578 UBE4AQ14139 1066 aa26.47■■□□□ 1.83
HMGA2-203ENST00000393578 ANKRD1Q15327 319 aa26.47■■□□□ 1.83
HMGA2-203ENST00000393578 SLC9C2Q5TAH2 1124 aa26.47■■□□□ 1.83
HMGA2-203ENST00000393578 SH2B1Q9NRF2 756 aaPredicted RBP26.47■■□□□ 1.83
HMGA2-203ENST00000393578 A0A1B0GUL6 1792 aa26.46■■□□□ 1.83
HMGA2-203ENST00000393578 TAF1P21675 1872 aa26.46■■□□□ 1.83
HMGA2-203ENST00000393578 NPHP1O15259 732 aa26.46■■□□□ 1.83
HMGA2-203ENST00000393578 UBE3CQ15386 1083 aa26.46■■□□□ 1.83
HMGA2-203ENST00000393578 BCAMP50895 628 aa26.46■■□□□ 1.83
HMGA2-203ENST00000393578 NEK1Q96PY6 1258 aa26.46■■□□□ 1.83
HMGA2-203ENST00000393578 PUS7LQ9H0K6 701 aaKnown RBP26.46■■□□□ 1.83
HMGA2-203ENST00000393578 IDH1O75874 414 aaKnown RBP26.45■■□□□ 1.82
HMGA2-203ENST00000393578 TXNRD1Q16881 649 aa26.45■■□□□ 1.82
HMGA2-203ENST00000393578 PKP1Q13835 747 aa26.44■■□□□ 1.82
HMGA2-203ENST00000393578 GYS1P13807 737 aa26.44■■□□□ 1.82
HMGA2-203ENST00000393578 CCDC24Q8N4L8 307 aa26.44■■□□□ 1.82
HMGA2-203ENST00000393578 CNBD1Q8NA66 436 aa26.44■■□□□ 1.82
HMGA2-203ENST00000393578 LARP6Q9BRS8 491 aaKnown RBP26.44■■□□□ 1.82
HMGA2-203ENST00000393578 CTNNA3Q9UI47 895 aa26.44■■□□□ 1.82
HMGA2-203ENST00000393578 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.44■■□□□ 1.82
HMGA2-203ENST00000393578 HMGB1P09429 215 aaKnown RBP26.43■■□□□ 1.82
HMGA2-203ENST00000393578 TM4SF1P30408 202 aa26.43■■□□□ 1.82
HMGA2-203ENST00000393578 COL9A3Q14050 684 aaPredicted RBP26.43■■□□□ 1.82
HMGA2-203ENST00000393578 PROM2Q8N271 834 aa26.43■■□□□ 1.82
HMGA2-203ENST00000393578 ZNF804BA4D1E1 1349 aa26.43■■□□□ 1.82
HMGA2-203ENST00000393578 PDE6AP16499 860 aa26.42■■□□□ 1.82
HMGA2-203ENST00000393578 GPAA1O43292 621 aa26.42■■□□□ 1.82
HMGA2-203ENST00000393578 MAP3K12Q12852 859 aa26.42■■□□□ 1.82
HMGA2-203ENST00000393578 FOXP2O15409 715 aa26.41■■□□□ 1.82
HMGA2-203ENST00000393578 ANKRD2Q9GZV1 360 aa26.41■■□□□ 1.82
HMGA2-203ENST00000393578 ZDHHC9Q9Y397 364 aa26.41■■□□□ 1.82
HMGA2-203ENST00000393578 ZNF532Q9HCE3 1301 aa26.41■■□□□ 1.82
HMGA2-203ENST00000393578 DOCK2Q92608 1830 aa26.41■■□□□ 1.82
HMGA2-203ENST00000393578 MYO5AQ9Y4I1 1855 aaKnown RBP26.41■■□□□ 1.82
HMGA2-203ENST00000393578 TCRBV5S4A2TA0A5A2 114 aa26.4■■□□□ 1.82
HMGA2-203ENST00000393578 PLSCR1O15162 318 aa26.4■■□□□ 1.82
HMGA2-203ENST00000393578 LARGE1O95461 756 aa26.4■■□□□ 1.82
HMGA2-203ENST00000393578 GNL3LQ9NVN8 582 aaKnown RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms