RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 CTDNEP1O95476 244 aa18.97■□□□□ 0.63
PHTF1-205ENST00000393357 ETF1P62495 437 aaKnown RBP18.97■□□□□ 0.63
PHTF1-205ENST00000393357 TRMT44Q8IYL2 757 aaKnown RBP18.97■□□□□ 0.63
PHTF1-205ENST00000393357 GDAP1L1Q96MZ0 367 aa18.97■□□□□ 0.63
PHTF1-205ENST00000393357 ZNF396Q96N95 335 aaPredicted RBP18.97■□□□□ 0.63
PHTF1-205ENST00000393357 GRM8O00222 908 aa18.97■□□□□ 0.63
PHTF1-205ENST00000393357 CPLX1O14810 134 aa18.97■□□□□ 0.63
PHTF1-205ENST00000393357 FANCGO15287 622 aa18.97■□□□□ 0.63
PHTF1-205ENST00000393357 GSDMDP57764 484 aa18.97■□□□□ 0.63
PHTF1-205ENST00000393357 TPM4P67936 248 aa18.97■□□□□ 0.63
PHTF1-205ENST00000393357 PNOCQ13519 176 aa18.97■□□□□ 0.63
PHTF1-205ENST00000393357 ZSCAN26Q16670 478 aa18.97■□□□□ 0.63
PHTF1-205ENST00000393357 VPS18Q9P253 973 aa18.97■□□□□ 0.63
PHTF1-205ENST00000393357 FEZ2Q9UHY8 353 aaPredicted RBP18.97■□□□□ 0.63
PHTF1-205ENST00000393357 ZSCAN16Q9H4T2 348 aaPredicted RBP18.96■□□□□ 0.63
PHTF1-205ENST00000393357 DBNLQ9UJU6 430 aaKnown RBP18.96■□□□□ 0.63
PHTF1-205ENST00000393357 MAP3K5Q99683 1374 aa18.96■□□□□ 0.63
PHTF1-205ENST00000393357 KIF20BQ96Q89 1820 aa18.96■□□□□ 0.63
PHTF1-205ENST00000393357 TOP1P11387 765 aaKnown RBP18.96■□□□□ 0.63
PHTF1-205ENST00000393357 HOXC9P31274 260 aa18.96■□□□□ 0.63
PHTF1-205ENST00000393357 ADD1P35611 737 aaKnown RBP18.96■□□□□ 0.63
PHTF1-205ENST00000393357 FKBP4Q02790 459 aaKnown RBP eCLIP18.96■□□□□ 0.63
PHTF1-205ENST00000393357 MTX1Q13505 466 aa18.96■□□□□ 0.63
PHTF1-205ENST00000393357 RBM43Q6ZSC3 357 aaKnown RBP18.96■□□□□ 0.63
PHTF1-205ENST00000393357 UBE3BQ7Z3V4 1068 aa18.96■□□□□ 0.63
PHTF1-205ENST00000393357 KIAA1468Q9P260 1216 aa18.96■□□□□ 0.63
PHTF1-205ENST00000393357 DIP2CQ9Y2E4 1556 aa18.96■□□□□ 0.63
PHTF1-205ENST00000393357 H2AFXP16104 143 aaPredicted RBP18.96■□□□□ 0.63
PHTF1-205ENST00000393357 PPARDQ03181 441 aa18.96■□□□□ 0.63
PHTF1-205ENST00000393357 CLIC6Q96NY7 704 aa18.96■□□□□ 0.63
PHTF1-205ENST00000393357 ADCY9O60503 1353 aa18.96■□□□□ 0.63
PHTF1-205ENST00000393357 RHOXF2BP0C7M4 288 aa18.95■□□□□ 0.62
PHTF1-205ENST00000393357 WASHC4Q2M389 1173 aa18.95■□□□□ 0.62
PHTF1-205ENST00000393357 NBPF6Q5VWK0 638 aa18.95■□□□□ 0.62
PHTF1-205ENST00000393357 ERC1Q8IUD2 1116 aa18.95■□□□□ 0.62
PHTF1-205ENST00000393357 NBPF4Q96M43 638 aa18.95■□□□□ 0.62
PHTF1-205ENST00000393357 RHOXF2Q9BQY4 288 aa18.95■□□□□ 0.62
PHTF1-205ENST00000393357 ZNF202O95125 648 aa18.95■□□□□ 0.62
PHTF1-205ENST00000393357 CCDC12Q8WUD4 166 aaPredicted RBP18.95■□□□□ 0.62
PHTF1-205ENST00000393357 SARM1Q6SZW1 724 aa18.95■□□□□ 0.62
PHTF1-205ENST00000393357 ROBO2Q9HCK4 1378 aa18.94■□□□□ 0.62
PHTF1-205ENST00000393357 A0A0U1RQJ8 604 aa18.94■□□□□ 0.62
PHTF1-205ENST00000393357 CTAGE5O15320 804 aa18.94■□□□□ 0.62
PHTF1-205ENST00000393357 CDC25BP30305 580 aa18.94■□□□□ 0.62
PHTF1-205ENST00000393357 LONRF3Q496Y0 759 aa18.94■□□□□ 0.62
PHTF1-205ENST00000393357 KLHL10Q6JEL2 608 aa18.94■□□□□ 0.62
PHTF1-205ENST00000393357 ATRIPQ8WXE1 791 aa18.94■□□□□ 0.62
PHTF1-205ENST00000393357 KAZALD1Q96I82 304 aa18.94■□□□□ 0.62
PHTF1-205ENST00000393357 C8orf76Q96K31 380 aa18.94■□□□□ 0.62
PHTF1-205ENST00000393357 RCOR1Q9UKL0 485 aa18.94■□□□□ 0.62
PHTF1-205ENST00000393357 HIP1O00291 1037 aa18.94■□□□□ 0.62
PHTF1-205ENST00000393357 CASQ1P31415 396 aa18.94■□□□□ 0.62
PHTF1-205ENST00000393357 CEBPAP49715 358 aaPredicted RBP18.94■□□□□ 0.62
PHTF1-205ENST00000393357 IPO4Q8TEX9 1081 aaKnown RBP18.94■□□□□ 0.62
PHTF1-205ENST00000393357 FANCLQ9NW38 375 aa18.94■□□□□ 0.62
PHTF1-205ENST00000393357 DBF4Q9UBU7 674 aaPredicted RBP18.94■□□□□ 0.62
PHTF1-205ENST00000393357 COL15A1P39059 1388 aa18.93■□□□□ 0.62
PHTF1-205ENST00000393357 MTF1Q14872 753 aa18.93■□□□□ 0.62
PHTF1-205ENST00000393357 PAXIP1Q6ZW49 1069 aaPredicted RBP18.93■□□□□ 0.62
PHTF1-205ENST00000393357 FLT4P35916 1363 aa18.93■□□□□ 0.62
PHTF1-205ENST00000393357 CDC42BPGQ6DT37 1551 aa18.93■□□□□ 0.62
PHTF1-205ENST00000393357 CEP170BQ9Y4F5 1589 aaPredicted RBP18.93■□□□□ 0.62
PHTF1-205ENST00000393357 FOXR1Q6PIV2 292 aa18.93■□□□□ 0.62
PHTF1-205ENST00000393357 CCDC102AQ96A19 550 aa18.93■□□□□ 0.62
PHTF1-205ENST00000393357 N4BP1O75113 896 aaKnown RBP18.93■□□□□ 0.62
PHTF1-205ENST00000393357 ILDR1Q86SU0 546 aaPredicted RBP18.93■□□□□ 0.62
PHTF1-205ENST00000393357 RICTORQ6R327 1708 aa18.92■□□□□ 0.62
PHTF1-205ENST00000393357 SPTLC2O15270 562 aa18.92■□□□□ 0.62
PHTF1-205ENST00000393357 FOXN1O15353 648 aa18.92■□□□□ 0.62
PHTF1-205ENST00000393357 GPS2Q13227 327 aa18.92■□□□□ 0.62
PHTF1-205ENST00000393357 PARD6BQ9BYG5 372 aa18.92■□□□□ 0.62
PHTF1-205ENST00000393357 ARFGAP3Q9NP61 516 aa18.92■□□□□ 0.62
PHTF1-205ENST00000393357 PPP2R3AQ06190 1150 aa18.91■□□□□ 0.62
PHTF1-205ENST00000393357 TOGARAM2Q6ZUX3 1019 aa18.91■□□□□ 0.62
PHTF1-205ENST00000393357 FMR1NBQ8N0W7 255 aaPredicted RBP18.91■□□□□ 0.62
PHTF1-205ENST00000393357 ENGASEQ8NFI3 743 aa18.91■□□□□ 0.62
PHTF1-205ENST00000393357 DHX58Q96C10 678 aa18.91■□□□□ 0.62
PHTF1-205ENST00000393357 IL17RAQ96F46 866 aa18.91■□□□□ 0.62
PHTF1-205ENST00000393357 KSR2Q6VAB6 950 aa18.91■□□□□ 0.62
PHTF1-205ENST00000393357 CCDC150Q8NCX0 1101 aa18.91■□□□□ 0.62
PHTF1-205ENST00000393357 IGSF1Q8N6C5 1336 aa18.91■□□□□ 0.62
PHTF1-205ENST00000393357 GOLGA8BA8MQT2 603 aa18.91■□□□□ 0.62
PHTF1-205ENST00000393357 UBE2Q2LH0YL09 131 aa18.91■□□□□ 0.62
PHTF1-205ENST00000393357 PDE11AQ9HCR9 933 aa18.91■□□□□ 0.62
PHTF1-205ENST00000393357 EPB41L2O43491 1005 aaKnown RBP18.9■□□□□ 0.62
PHTF1-205ENST00000393357 PFKFB1P16118 471 aa18.9■□□□□ 0.62
PHTF1-205ENST00000393357 FAM193AP78312 1265 aa18.9■□□□□ 0.62
PHTF1-205ENST00000393357 C1orf141Q5JVX7 400 aa18.9■□□□□ 0.62
PHTF1-205ENST00000393357 CYB5RLQ6IPT4 315 aa18.9■□□□□ 0.62
PHTF1-205ENST00000393357 DHX32Q7L7V1 743 aaKnown RBP18.9■□□□□ 0.62
PHTF1-205ENST00000393357 KIF2AO00139 706 aaPredicted RBP18.9■□□□□ 0.62
PHTF1-205ENST00000393357 STX17P56962 302 aa18.9■□□□□ 0.62
PHTF1-205ENST00000393357 KRT32Q14532 448 aa18.9■□□□□ 0.62
PHTF1-205ENST00000393357 MCMDC2Q4G0Z9 681 aa18.9■□□□□ 0.62
PHTF1-205ENST00000393357 COPS6Q7L5N1 327 aa18.9■□□□□ 0.62
PHTF1-205ENST00000393357 GRAMD1CQ8IYS0 662 aa18.9■□□□□ 0.62
PHTF1-205ENST00000393357 KLF18A0A0U1RQI7 1052 aa18.89■□□□□ 0.62
PHTF1-205ENST00000393357 MYO1CO00159 1063 aa18.89■□□□□ 0.62
PHTF1-205ENST00000393357 TBC1D8O95759 1140 aa18.89■□□□□ 0.62
PHTF1-205ENST00000393357 FKBP15Q5T1M5 1219 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms