RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 SETQ01105 290 aaPredicted RBP21.88■■□□□ 1.09
SMARCD1-201ENST00000381513 CARD10Q9BWT7 1032 aa21.88■■□□□ 1.09
SMARCD1-201ENST00000381513 KIAA1468Q9P260 1216 aa21.88■■□□□ 1.09
SMARCD1-201ENST00000381513 NRXN1Q9ULB1 1477 aa21.88■■□□□ 1.09
SMARCD1-201ENST00000381513 RPS6KB1P23443 525 aa21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 ACBD3Q9H3P7 528 aa21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 RCOR1Q9UKL0 485 aa21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 TAF6LQ9Y6J9 622 aa21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 ARHGAP6O43182 974 aa21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 KIF1CO43896 1103 aaKnown RBP21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 IBSPP21815 317 aaPredicted RBP21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 TOB2Q14106 344 aaPredicted RBP21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 NME9Q86XW9 330 aa21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 DPF2Q92785 391 aa21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 IRX2Q9BZI1 471 aaPredicted RBP21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 SETBP1Q9Y6X0 1596 aa21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 CDK12Q9NYV4 1490 aaPredicted RBP21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 SLC3A2P08195 630 aaKnown RBP21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 CASP8Q14790 479 aa21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 GGT6Q6P531 493 aa21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 GIMAP7Q8NHV1 300 aa21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 FAM71BQ8TC56 605 aa21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 MRPS27Q92552 414 aaKnown RBP21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 PNKPQ96T60 521 aa21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 GLI2P10070 1586 aa21.87■■□□□ 1.09
SMARCD1-201ENST00000381513 ERC1Q8IUD2 1116 aa21.86■■□□□ 1.09
SMARCD1-201ENST00000381513 ZNF396Q96N95 335 aaPredicted RBP21.86■■□□□ 1.09
SMARCD1-201ENST00000381513 CCDC196A0A1B0GTZ2 297 aa21.86■■□□□ 1.09
SMARCD1-201ENST00000381513 HNRNPH1P31943 449 aaKnown RBP21.86■■□□□ 1.09
SMARCD1-201ENST00000381513 SATB1Q01826 763 aa21.86■■□□□ 1.09
SMARCD1-201ENST00000381513 KAT2BQ92831 832 aa21.86■■□□□ 1.09
SMARCD1-201ENST00000381513 LRRC2Q9BYS8 371 aa21.86■■□□□ 1.09
SMARCD1-201ENST00000381513 RAI14Q9P0K7 980 aa21.86■■□□□ 1.09
SMARCD1-201ENST00000381513 ADGRB1O14514 1584 aa21.86■■□□□ 1.09
SMARCD1-201ENST00000381513 PPP2R5AQ15172 486 aa21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 ENGASEQ8NFI3 743 aa21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 BAG1Q99933 345 aaPredicted RBP21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 USP44Q9H0E7 712 aa21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 MED4Q9NPJ6 270 aa21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 LZTFL1Q9NQ48 299 aa21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 TET3O43151 1660 aa21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 AFAP1L1Q8TED9 768 aa21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 JPH2Q9BR39 696 aaPredicted RBP21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 FAM107BQ9H098 131 aa21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 GOLGA6L9A6NEM1 432 aa21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 H0YHG0 523 aa21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 CPP00450 1065 aa21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 CCT5P48643 541 aa21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 CLASRPQ8N2M8 674 aaKnown RBP21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 L1RE1Q9UN81 338 aa21.85■■□□□ 1.09
SMARCD1-201ENST00000381513 SRGAP1Q7Z6B7 1085 aa21.84■■□□□ 1.09
SMARCD1-201ENST00000381513 SSH3Q8TE77 659 aa21.84■■□□□ 1.09
SMARCD1-201ENST00000381513 KIF1BO60333 1816 aa21.84■■□□□ 1.09
SMARCD1-201ENST00000381513 CBFA2T2O43439 604 aa21.84■■□□□ 1.09
SMARCD1-201ENST00000381513 NDUFA8P51970 172 aa21.84■■□□□ 1.09
SMARCD1-201ENST00000381513 GBP6Q6ZN66 633 aa21.84■■□□□ 1.09
SMARCD1-201ENST00000381513 TOGARAM2Q6ZUX3 1019 aa21.84■■□□□ 1.09
SMARCD1-201ENST00000381513 RPAINQ86UA6 219 aa21.84■■□□□ 1.09
SMARCD1-201ENST00000381513 TMEM232C9JQI7 657 aa21.84■■□□□ 1.09
SMARCD1-201ENST00000381513 RNF40O75150 1001 aa21.84■■□□□ 1.09
SMARCD1-201ENST00000381513 NMIQ13287 307 aaPredicted RBP21.84■■□□□ 1.09
SMARCD1-201ENST00000381513 SMARCC1Q92922 1105 aaPredicted RBP21.84■■□□□ 1.09
SMARCD1-201ENST00000381513 ANKZF1Q9H8Y5 726 aa21.84■■□□□ 1.09
SMARCD1-201ENST00000381513 TAOK2Q9UL54 1235 aa21.83■■□□□ 1.09
SMARCD1-201ENST00000381513 KIF4BQ2VIQ3 1234 aa21.83■■□□□ 1.08
SMARCD1-201ENST00000381513 POTEB2H3BUK9 544 aa21.82■■□□□ 1.08
SMARCD1-201ENST00000381513 EBAG9O00559 213 aa21.82■■□□□ 1.08
SMARCD1-201ENST00000381513 MTX1Q13505 466 aa21.82■■□□□ 1.08
SMARCD1-201ENST00000381513 ADKP55263 362 aaKnown RBP21.82■■□□□ 1.08
SMARCD1-201ENST00000381513 STK38Q15208 465 aa21.82■■□□□ 1.08
SMARCD1-201ENST00000381513 GPATCH3Q96I76 525 aa21.82■■□□□ 1.08
SMARCD1-201ENST00000381513 BCCIPQ9P287 314 aaKnown RBP eCLIP21.82■■□□□ 1.08
SMARCD1-201ENST00000381513 PCDHA7Q9UN72 937 aa21.82■■□□□ 1.08
SMARCD1-201ENST00000381513 CD163L1Q9NR16 1453 aa21.82■■□□□ 1.08
SMARCD1-201ENST00000381513 EXOC5O00471 708 aa21.82■■□□□ 1.08
SMARCD1-201ENST00000381513 CUTAO60888 179 aa21.82■■□□□ 1.08
SMARCD1-201ENST00000381513 VSNL1P62760 191 aa21.82■■□□□ 1.08
SMARCD1-201ENST00000381513 MAP4K1Q92918 833 aa21.82■■□□□ 1.08
SMARCD1-201ENST00000381513 HNRNPLLQ8WVV9 542 aaKnown RBP21.81■■□□□ 1.08
SMARCD1-201ENST00000381513 ASXL2Q76L83 1435 aa21.81■■□□□ 1.08
SMARCD1-201ENST00000381513 ADD1P35611 737 aaKnown RBP21.81■■□□□ 1.08
SMARCD1-201ENST00000381513 FMR1NBQ8N0W7 255 aaPredicted RBP21.81■■□□□ 1.08
SMARCD1-201ENST00000381513 ECHDC1Q9NTX5 307 aa21.81■■□□□ 1.08
SMARCD1-201ENST00000381513 FCHSD1Q86WN1 690 aa21.8■■□□□ 1.08
SMARCD1-201ENST00000381513 CLIC6Q96NY7 704 aa21.8■■□□□ 1.08
SMARCD1-201ENST00000381513 ADGRL3Q9HAR2 1447 aa21.8■■□□□ 1.08
SMARCD1-201ENST00000381513 NLRP12P59046 1061 aa21.8■■□□□ 1.08
SMARCD1-201ENST00000381513 NCAPHQ15003 741 aa21.8■■□□□ 1.08
SMARCD1-201ENST00000381513 CEP112Q8N8E3 955 aa21.8■■□□□ 1.08
SMARCD1-201ENST00000381513 KIFC2Q96AC6 838 aa21.8■■□□□ 1.08
SMARCD1-201ENST00000381513 COG3Q96JB2 828 aa21.8■■□□□ 1.08
SMARCD1-201ENST00000381513 GBP3Q9H0R5 595 aa21.8■■□□□ 1.08
SMARCD1-201ENST00000381513 FAM169AQ9Y6X4 670 aa21.8■■□□□ 1.08
SMARCD1-201ENST00000381513 SCP2P22307 547 aa21.8■■□□□ 1.08
SMARCD1-201ENST00000381513 LRCH2Q5VUJ6 765 aa21.8■■□□□ 1.08
SMARCD1-201ENST00000381513 Q6ZUG5 572 aa21.8■■□□□ 1.08
SMARCD1-201ENST00000381513 TFRCP02786 760 aaKnown RBP21.79■■□□□ 1.08
SMARCD1-201ENST00000381513 FSD1Q9BTV5 496 aa21.79■■□□□ 1.08
SMARCD1-201ENST00000381513 ABCC3O15438 1527 aa21.79■■□□□ 1.08
SMARCD1-201ENST00000381513 CCT2P78371 535 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms