RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 FPGT-TNNI3KV9GXZ4 949 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 RRAGBQ5VZM2 374 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 IL17REQ8NFR9 667 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 TRIM47Q96LD4 638 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 ZKSCAN3Q9BRR0 538 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 IFNKQ9P0W0 207 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 A1BGP04217 495 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 IL2RBP14784 551 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 ATP6V1AP38606 617 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 NAA16Q6N069 864 aaPredicted RBP19.67■□□□□ 0.74
SGCB-201ENST00000381431 TMTC2Q8N394 836 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 BAG3O95817 575 aa19.66■□□□□ 0.74
SGCB-201ENST00000381431 DZIP3Q86Y13 1208 aaKnown RBP19.66■□□□□ 0.74
SGCB-201ENST00000381431 TSG101Q99816 390 aa19.66■□□□□ 0.74
SGCB-201ENST00000381431 CRNKL1Q9BZJ0 848 aaKnown RBP19.66■□□□□ 0.74
SGCB-201ENST00000381431 ATP7AQ04656 1500 aa19.66■□□□□ 0.74
SGCB-201ENST00000381431 LDHCP07864 332 aa19.66■□□□□ 0.74
SGCB-201ENST00000381431 TCERG1LQ5VWI1 586 aa19.66■□□□□ 0.74
SGCB-201ENST00000381431 CNNM2Q9H8M5 875 aa19.66■□□□□ 0.74
SGCB-201ENST00000381431 PAFAH1B1P43034 410 aa19.66■□□□□ 0.74
SGCB-201ENST00000381431 GTF2F1P35269 517 aaKnown RBP eCLIP19.65■□□□□ 0.74
SGCB-201ENST00000381431 MAGEB6Q8N7X4 407 aa19.65■□□□□ 0.74
SGCB-201ENST00000381431 METTL22Q9BUU2 404 aaPredicted RBP19.65■□□□□ 0.74
SGCB-201ENST00000381431 EYA2O00167 538 aa19.65■□□□□ 0.74
SGCB-201ENST00000381431 USO1O60763 962 aaKnown RBP19.65■□□□□ 0.74
SGCB-201ENST00000381431 ZNF496Q96IT1 587 aaPredicted RBP19.65■□□□□ 0.74
SGCB-201ENST00000381431 PLEKHF1Q96S99 279 aa19.65■□□□□ 0.74
SGCB-201ENST00000381431 TRIM75PA6NK02 468 aa19.65■□□□□ 0.74
SGCB-201ENST00000381431 MATR3P43243 847 aaKnown RBP eCLIP19.65■□□□□ 0.74
SGCB-201ENST00000381431 SPTY2D1Q68D10 685 aaPredicted RBP19.65■□□□□ 0.74
SGCB-201ENST00000381431 CALML4Q96GE6 196 aa19.65■□□□□ 0.74
SGCB-201ENST00000381431 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.65■□□□□ 0.74
SGCB-201ENST00000381431 PPP1R12BO60237 982 aaPredicted RBP19.64■□□□□ 0.73
SGCB-201ENST00000381431 HSPA4P34932 840 aa19.64■□□□□ 0.73
SGCB-201ENST00000381431 JAG2Q9Y219 1238 aa19.64■□□□□ 0.73
SGCB-201ENST00000381431 ZNF445P59923 1031 aa19.64■□□□□ 0.73
SGCB-201ENST00000381431 EIF4A1P60842 406 aaKnown RBP19.64■□□□□ 0.73
SGCB-201ENST00000381431 CCDC40Q4G0X9 1142 aa19.64■□□□□ 0.73
SGCB-201ENST00000381431 PHF23Q9BUL5 403 aaPredicted RBP19.64■□□□□ 0.73
SGCB-201ENST00000381431 KIF21AQ7Z4S6 1674 aa19.64■□□□□ 0.73
SGCB-201ENST00000381431 TRIM21P19474 475 aaKnown RBP19.64■□□□□ 0.73
SGCB-201ENST00000381431 RDXP35241 583 aaKnown RBP19.64■□□□□ 0.73
SGCB-201ENST00000381431 JAK2O60674 1132 aa19.63■□□□□ 0.73
SGCB-201ENST00000381431 LIG1P18858 919 aa19.63■□□□□ 0.73
SGCB-201ENST00000381431 SSR1P43307 286 aaKnown RBP19.63■□□□□ 0.73
SGCB-201ENST00000381431 GOLGA6L9A6NEM1 432 aa19.63■□□□□ 0.73
SGCB-201ENST00000381431 HOXB7P09629 217 aa19.63■□□□□ 0.73
SGCB-201ENST00000381431 IGSF3O75054 1194 aa19.63■□□□□ 0.73
SGCB-201ENST00000381431 HSPA2P54652 639 aa19.63■□□□□ 0.73
SGCB-201ENST00000381431 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.63■□□□□ 0.73
SGCB-201ENST00000381431 AKR1B10O60218 316 aa19.62■□□□□ 0.73
SGCB-201ENST00000381431 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
SGCB-201ENST00000381431 B4E1Z4 1266 aa19.62■□□□□ 0.73
SGCB-201ENST00000381431 TRPM2O94759 1503 aa19.62■□□□□ 0.73
SGCB-201ENST00000381431 MYO1BO43795 1136 aa19.62■□□□□ 0.73
SGCB-201ENST00000381431 BRD1O95696 1058 aa19.62■□□□□ 0.73
SGCB-201ENST00000381431 GCKRQ14397 625 aa19.62■□□□□ 0.73
SGCB-201ENST00000381431 NLRP3Q96P20 1036 aa19.62■□□□□ 0.73
SGCB-201ENST00000381431 JADE2Q9NQC1 790 aa19.62■□□□□ 0.73
SGCB-201ENST00000381431 FGFR1OPO95684 399 aaKnown RBP19.62■□□□□ 0.73
SGCB-201ENST00000381431 BMS1Q14692 1282 aaKnown RBP19.62■□□□□ 0.73
SGCB-201ENST00000381431 MAP9Q49MG5 647 aa19.62■□□□□ 0.73
SGCB-201ENST00000381431 CCDC178Q5BJE1 867 aa19.62■□□□□ 0.73
SGCB-201ENST00000381431 CCDC191Q8NCU4 936 aa19.62■□□□□ 0.73
SGCB-201ENST00000381431 PLEKHG3A1L390 1219 aa19.61■□□□□ 0.73
SGCB-201ENST00000381431 CD2BP2O95400 341 aaKnown RBP19.61■□□□□ 0.73
SGCB-201ENST00000381431 CDC37L1Q7L3B6 337 aa19.61■□□□□ 0.73
SGCB-201ENST00000381431 GAS2L3Q86XJ1 694 aa19.61■□□□□ 0.73
SGCB-201ENST00000381431 BABAM1Q9NWV8 329 aa19.61■□□□□ 0.73
SGCB-201ENST00000381431 AMPD3Q01432 767 aa19.61■□□□□ 0.73
SGCB-201ENST00000381431 HEATR3Q7Z4Q2 680 aa19.61■□□□□ 0.73
SGCB-201ENST00000381431 STAT6P42226 847 aa19.61■□□□□ 0.73
SGCB-201ENST00000381431 TSPY3P0CV98 308 aa19.6■□□□□ 0.73
SGCB-201ENST00000381431 TSPY8P0CW00 308 aa19.6■□□□□ 0.73
SGCB-201ENST00000381431 MBD4O95243 580 aa19.6■□□□□ 0.73
SGCB-201ENST00000381431 PLBD2Q8NHP8 589 aa19.6■□□□□ 0.73
SGCB-201ENST00000381431 SSH3Q8TE77 659 aa19.6■□□□□ 0.73
SGCB-201ENST00000381431 ZMYND15Q9H091 742 aa19.6■□□□□ 0.73
SGCB-201ENST00000381431 F8W031 263 aaPredicted RBP19.6■□□□□ 0.73
SGCB-201ENST00000381431 LTKP29376 864 aa19.6■□□□□ 0.73
SGCB-201ENST00000381431 RFC4P35249 363 aa19.6■□□□□ 0.73
SGCB-201ENST00000381431 FAM160A1Q05DH4 1040 aa19.6■□□□□ 0.73
SGCB-201ENST00000381431 KBTBD3Q8NAB2 608 aa19.6■□□□□ 0.73
SGCB-201ENST00000381431 EAF2Q96CJ1 260 aaPredicted RBP19.6■□□□□ 0.73
SGCB-201ENST00000381431 UTP14AQ9BVJ6 771 aaKnown RBP19.6■□□□□ 0.73
SGCB-201ENST00000381431 VPS36Q86VN1 386 aa19.59■□□□□ 0.73
SGCB-201ENST00000381431 HLTFQ14527 1009 aaKnown RBP eCLIP19.59■□□□□ 0.73
SGCB-201ENST00000381431 MCM6Q14566 821 aa19.59■□□□□ 0.73
SGCB-201ENST00000381431 LEO1Q8WVC0 666 aaPredicted RBP19.59■□□□□ 0.73
SGCB-201ENST00000381431 DRC1Q96MC2 740 aa19.59■□□□□ 0.73
SGCB-201ENST00000381431 PTH1RQ03431 593 aa19.59■□□□□ 0.73
SGCB-201ENST00000381431 SYT10Q6XYQ8 523 aa19.59■□□□□ 0.73
SGCB-201ENST00000381431 BRAPQ7Z569 592 aa19.59■□□□□ 0.73
SGCB-201ENST00000381431 DDX17Q92841 729 aaKnown RBP19.59■□□□□ 0.73
SGCB-201ENST00000381431 MAGEB6P1A0A0J9YX57 407 aa19.58■□□□□ 0.73
SGCB-201ENST00000381431 SLU7O95391 586 aaKnown RBP19.58■□□□□ 0.73
SGCB-201ENST00000381431 NOP2P46087 812 aaKnown RBP19.58■□□□□ 0.73
SGCB-201ENST00000381431 KARSQ15046 597 aaKnown RBP19.58■□□□□ 0.73
SGCB-201ENST00000381431 AEBP2Q6ZN18 517 aaPredicted RBP19.58■□□□□ 0.73
SGCB-201ENST00000381431 SLF2Q8IX21 1173 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms