RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 TXNRD1Q16881 649 aa25.77■■□□□ 1.72
GMDS-202ENST00000380815 RXRBP28702 533 aa25.77■■□□□ 1.72
GMDS-202ENST00000380815 TTF1Q15361 905 aaPredicted RBP25.77■■□□□ 1.72
GMDS-202ENST00000380815 PROM2Q8N271 834 aa25.77■■□□□ 1.72
GMDS-202ENST00000380815 TMX3Q96JJ7 454 aa25.77■■□□□ 1.72
GMDS-202ENST00000380815 TTC14Q96N46 770 aa25.77■■□□□ 1.72
GMDS-202ENST00000380815 COL4A1P02462 1669 aa25.76■■□□□ 1.71
GMDS-202ENST00000380815 TSGA10IPQ3SY00 556 aa25.76■■□□□ 1.71
GMDS-202ENST00000380815 PI16Q6UXB8 463 aa25.76■■□□□ 1.71
GMDS-202ENST00000380815 CCDC129Q6ZRS4 1044 aa25.76■■□□□ 1.71
GMDS-202ENST00000380815 FOXD4L1Q9NU39 408 aa25.76■■□□□ 1.71
GMDS-202ENST00000380815 U3KPZ7 1027 aaPredicted RBP25.76■■□□□ 1.71
GMDS-202ENST00000380815 PLSCR1O15162 318 aa25.75■■□□□ 1.71
GMDS-202ENST00000380815 CASTP20810 708 aaKnown RBP25.75■■□□□ 1.71
GMDS-202ENST00000380815 ZSWIM6Q9HCJ5 1215 aa25.75■■□□□ 1.71
GMDS-202ENST00000380815 JAKMIP1Q96N16 626 aaKnown RBP25.74■■□□□ 1.71
GMDS-202ENST00000380815 CWC22Q9HCG8 908 aaKnown RBP25.74■■□□□ 1.71
GMDS-202ENST00000380815 ADCK5Q3MIX3 580 aa25.74■■□□□ 1.71
GMDS-202ENST00000380815 DSCC1Q9BVC3 393 aa25.74■■□□□ 1.71
GMDS-202ENST00000380815 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.74■■□□□ 1.71
GMDS-202ENST00000380815 MAST3O60307 1309 aa25.73■■□□□ 1.71
GMDS-202ENST00000380815 RPAP1Q9BWH6 1393 aaPredicted RBP25.73■■□□□ 1.71
GMDS-202ENST00000380815 FRAT2O75474 233 aaPredicted RBP25.73■■□□□ 1.71
GMDS-202ENST00000380815 CYP2E1P05181 493 aaPredicted RBP25.73■■□□□ 1.71
GMDS-202ENST00000380815 GYS1P13807 737 aa25.73■■□□□ 1.71
GMDS-202ENST00000380815 PSMA5P28066 241 aa25.73■■□□□ 1.71
GMDS-202ENST00000380815 SLFNL1Q499Z3 407 aa25.73■■□□□ 1.71
GMDS-202ENST00000380815 CELF1Q92879 486 aaKnown RBP25.73■■□□□ 1.71
GMDS-202ENST00000380815 SNAP23O00161 211 aa25.72■■□□□ 1.71
GMDS-202ENST00000380815 RPS8P62241 208 aaKnown RBP25.72■■□□□ 1.71
GMDS-202ENST00000380815 CUL4AQ13619 759 aa25.72■■□□□ 1.71
GMDS-202ENST00000380815 ZSCAN25Q6NSZ9 544 aa25.72■■□□□ 1.71
GMDS-202ENST00000380815 MINPP1Q9UNW1 487 aa25.72■■□□□ 1.71
GMDS-202ENST00000380815 CYP46A1Q9Y6A2 500 aa25.72■■□□□ 1.71
GMDS-202ENST00000380815 NPHP1O15259 732 aa25.72■■□□□ 1.71
GMDS-202ENST00000380815 VPS53Q5VIR6 699 aa25.72■■□□□ 1.71
GMDS-202ENST00000380815 CNBD1Q8NA66 436 aa25.72■■□□□ 1.71
GMDS-202ENST00000380815 UBE4AQ14139 1066 aa25.71■■□□□ 1.71
GMDS-202ENST00000380815 RUFY3Q7L099 469 aa25.71■■□□□ 1.71
GMDS-202ENST00000380815 SPATA5Q8NB90 893 aa25.71■■□□□ 1.71
GMDS-202ENST00000380815 APPBP2Q92624 585 aa25.71■■□□□ 1.71
GMDS-202ENST00000380815 OSBP2Q969R2 916 aa25.71■■□□□ 1.71
GMDS-202ENST00000380815 TM4SF1P30408 202 aa25.7■■□□□ 1.7
GMDS-202ENST00000380815 KRT32Q14532 448 aa25.7■■□□□ 1.7
GMDS-202ENST00000380815 INTS4Q96HW7 963 aaKnown RBP25.7■■□□□ 1.7
GMDS-202ENST00000380815 M0R2C6 588 aa25.69■■□□□ 1.7
GMDS-202ENST00000380815 RASGRF1Q13972 1273 aa25.69■■□□□ 1.7
GMDS-202ENST00000380815 RAB3GAP1Q15042 981 aa25.69■■□□□ 1.7
GMDS-202ENST00000380815 CCDC24Q8N4L8 307 aa25.69■■□□□ 1.7
GMDS-202ENST00000380815 TAF1P21675 1872 aa25.69■■□□□ 1.7
GMDS-202ENST00000380815 A0A1B0GUL6 1792 aa25.69■■□□□ 1.7
GMDS-202ENST00000380815 HSPD1P10809 573 aaKnown RBP25.69■■□□□ 1.7
GMDS-202ENST00000380815 AK2P54819 239 aa25.69■■□□□ 1.7
GMDS-202ENST00000380815 WASHC4Q2M389 1173 aa25.69■■□□□ 1.7
GMDS-202ENST00000380815 PIH1D3Q9NQM4 214 aaKnown RBP25.69■■□□□ 1.7
GMDS-202ENST00000380815 PDRG1Q9NUG6 133 aa25.69■■□□□ 1.7
GMDS-202ENST00000380815 MYH7P12883 1935 aa25.69■■□□□ 1.7
GMDS-202ENST00000380815 APBA3O96018 575 aa25.68■■□□□ 1.7
GMDS-202ENST00000380815 BCAMP50895 628 aa25.68■■□□□ 1.7
GMDS-202ENST00000380815 ADD2P35612 726 aa25.67■■□□□ 1.7
GMDS-202ENST00000380815 UBE3CQ15386 1083 aa25.67■■□□□ 1.7
GMDS-202ENST00000380815 PRR5LQ6MZQ0 368 aa25.67■■□□□ 1.7
GMDS-202ENST00000380815 LIMCH1Q9UPQ0 1083 aa25.67■■□□□ 1.7
GMDS-202ENST00000380815 TNRC6CQ9HCJ0 1690 aaKnown RBP25.67■■□□□ 1.7
GMDS-202ENST00000380815 CPA1P15085 419 aa25.67■■□□□ 1.7
GMDS-202ENST00000380815 NOL8Q76FK4 1167 aaKnown RBP25.67■■□□□ 1.7
GMDS-202ENST00000380815 ZGPATQ8N5A5 531 aaKnown RBP25.67■■□□□ 1.7
GMDS-202ENST00000380815 ZNF804BA4D1E1 1349 aa25.66■■□□□ 1.7
GMDS-202ENST00000380815 SLC9C2Q5TAH2 1124 aa25.66■■□□□ 1.7
GMDS-202ENST00000380815 ANKRD2Q9GZV1 360 aa25.66■■□□□ 1.7
GMDS-202ENST00000380815 TAF6LQ9Y6J9 622 aa25.66■■□□□ 1.7
GMDS-202ENST00000380815 IDH1O75874 414 aaKnown RBP25.65■■□□□ 1.7
GMDS-202ENST00000380815 CYP21A2P08686 494 aa25.65■■□□□ 1.7
GMDS-202ENST00000380815 NUCB2P80303 420 aa25.65■■□□□ 1.7
GMDS-202ENST00000380815 BLOC1S2Q6QNY1 142 aa25.65■■□□□ 1.7
GMDS-202ENST00000380815 ALDH8A1Q9H2A2 487 aaPredicted RBP25.65■■□□□ 1.7
GMDS-202ENST00000380815 PUS7LQ9H0K6 701 aaKnown RBP25.64■■□□□ 1.7
GMDS-202ENST00000380815 GNL3LQ9NVN8 582 aaKnown RBP25.64■■□□□ 1.7
GMDS-202ENST00000380815 SERPINB2P05120 415 aa25.64■■□□□ 1.69
GMDS-202ENST00000380815 TNPO1Q92973 898 aaKnown RBP25.64■■□□□ 1.69
GMDS-202ENST00000380815 AKT1S1Q96B36 256 aa25.64■■□□□ 1.69
GMDS-202ENST00000380815 TFCP2L1Q9NZI6 479 aa25.64■■□□□ 1.69
GMDS-202ENST00000380815 RPS6KB1P23443 525 aa25.63■■□□□ 1.69
GMDS-202ENST00000380815 ST5P78524 1137 aa25.63■■□□□ 1.69
GMDS-202ENST00000380815 RGS17Q9UGC6 210 aaPredicted RBP25.63■■□□□ 1.69
GMDS-202ENST00000380815 PDE6AP16499 860 aa25.62■■□□□ 1.69
GMDS-202ENST00000380815 MAP3K12Q12852 859 aa25.62■■□□□ 1.69
GMDS-202ENST00000380815 CAVIN4Q5BKX8 364 aa25.62■■□□□ 1.69
GMDS-202ENST00000380815 ZSCAN31Q96LW9 406 aaPredicted RBP25.62■■□□□ 1.69
GMDS-202ENST00000380815 GPAA1O43292 621 aa25.61■■□□□ 1.69
GMDS-202ENST00000380815 GRAPQ13588 217 aa25.61■■□□□ 1.69
GMDS-202ENST00000380815 ZNF827Q17R98 1081 aa25.61■■□□□ 1.69
GMDS-202ENST00000380815 GRAPLQ8TC17 118 aaPredicted RBP25.61■■□□□ 1.69
GMDS-202ENST00000380815 NEK1Q96PY6 1258 aa25.61■■□□□ 1.69
GMDS-202ENST00000380815 CTNNA3Q9UI47 895 aa25.61■■□□□ 1.69
GMDS-202ENST00000380815 DOCK2Q92608 1830 aa25.61■■□□□ 1.69
GMDS-202ENST00000380815 ZNF532Q9HCE3 1301 aa25.61■■□□□ 1.69
GMDS-202ENST00000380815 TCRBV5S4A2TA0A5A2 114 aa25.61■■□□□ 1.69
GMDS-202ENST00000380815 ANKRD1Q15327 319 aa25.61■■□□□ 1.69
GMDS-202ENST00000380815 CRY2Q49AN0 593 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms