RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 BRF1Q92994 677 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 CCDC114Q96M63 670 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 ZSWIM4Q9H7M6 989 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 PRAG1Q86YV5 1406 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 PRC1O43663 620 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 DNA2P51530 1060 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 CPLX4Q7Z7G2 160 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 SYCP3Q8IZU3 236 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 RAPGEF6Q8TEU7 1601 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 TRIM75PA6NK02 468 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 ALDH3A1P30838 453 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 MAP3K9P80192 1104 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 MRPL50Q8N5N7 158 aaKnown RBP10.85□□□□□ -0.67
SNX1-202ENST00000380285 CCDC110Q8TBZ0 833 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 IQCDQ96DY2 449 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 CRNKL1Q9BZJ0 848 aaKnown RBP10.85□□□□□ -0.67
SNX1-202ENST00000380285 CEP83Q9Y592 693 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 BICDL1Q6ZP65 573 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 AFAP1L1Q8TED9 768 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 MYL5Q02045 173 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 RUFY3Q7L099 469 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 ATP2A2P16615 1042 aaKnown RBP10.85□□□□□ -0.67
SNX1-202ENST00000380285 ZNF830Q96NB3 372 aaPredicted RBP10.85□□□□□ -0.67
SNX1-202ENST00000380285 HDAC9Q9UKV0 1011 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 CCDC26Q8TAB7 109 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 BAG1Q99933 345 aaPredicted RBP10.85□□□□□ -0.67
SNX1-202ENST00000380285 TRIM7Q9C029 511 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 TMX1Q9H3N1 280 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 AKR1B15C9JRZ8 316 aaPredicted RBP10.85□□□□□ -0.67
SNX1-202ENST00000380285 FAM160A1Q05DH4 1040 aa10.85□□□□□ -0.67
SNX1-202ENST00000380285 LUC7L2Q9Y383 392 aaKnown RBP10.85□□□□□ -0.67
SNX1-202ENST00000380285 NPC1L1Q9UHC9 1359 aa10.84□□□□□ -0.67
SNX1-202ENST00000380285 KRT13P13646 458 aa10.84□□□□□ -0.67
SNX1-202ENST00000380285 PTGS1P23219 599 aa10.84□□□□□ -0.67
SNX1-202ENST00000380285 SH3BGRP55822 239 aaPredicted RBP10.84□□□□□ -0.67
SNX1-202ENST00000380285 CFAP58Q5T655 872 aa10.84□□□□□ -0.67
SNX1-202ENST00000380285 Q6ZUG5 572 aa10.84□□□□□ -0.67
SNX1-202ENST00000380285 WDR66Q8TBY9 1149 aa10.84□□□□□ -0.67
SNX1-202ENST00000380285 VWA3BQ502W6 1294 aa10.84□□□□□ -0.67
SNX1-202ENST00000380285 TSPY2A6NKD2 308 aa10.84□□□□□ -0.67
SNX1-202ENST00000380285 GIGYF1O75420 1035 aaPredicted RBP10.84□□□□□ -0.67
SNX1-202ENST00000380285 NEK11Q8NG66 645 aa10.84□□□□□ -0.67
SNX1-202ENST00000380285 NDC80O14777 642 aa10.84□□□□□ -0.67
SNX1-202ENST00000380285 RPGRIP1Q96KN7 1286 aa10.84□□□□□ -0.67
SNX1-202ENST00000380285 PEG3Q9GZU2 1588 aa10.84□□□□□ -0.67
SNX1-202ENST00000380285 IL15P40933 162 aaPredicted RBP10.84□□□□□ -0.67
SNX1-202ENST00000380285 PPP2R3AQ06190 1150 aa10.84□□□□□ -0.67
SNX1-202ENST00000380285 KIAA1524Q8TCG1 905 aa10.84□□□□□ -0.67
SNX1-202ENST00000380285 CPSF2Q9P2I0 782 aaKnown RBP10.84□□□□□ -0.67
SNX1-202ENST00000380285 NOS1P29475 1434 aa10.83□□□□□ -0.68
SNX1-202ENST00000380285 IFIT1BQ5T764 474 aaKnown RBP10.83□□□□□ -0.68
SNX1-202ENST00000380285 SPATS2Q86XZ4 545 aaKnown RBP10.83□□□□□ -0.68
SNX1-202ENST00000380285 USP26Q9BXU7 913 aa10.83□□□□□ -0.68
SNX1-202ENST00000380285 TRMT112Q9UI30 125 aaKnown RBP10.83□□□□□ -0.68
SNX1-202ENST00000380285 MTUS1Q9ULD2 1270 aa10.83□□□□□ -0.68
SNX1-202ENST00000380285 ATP11AP98196 1134 aa10.83□□□□□ -0.68
SNX1-202ENST00000380285 PPFIBP2Q8ND30 876 aa10.83□□□□□ -0.68
SNX1-202ENST00000380285 NAP1L4Q99733 375 aaKnown RBP10.83□□□□□ -0.68
SNX1-202ENST00000380285 PI4KAP2A4QPH2 592 aa10.83□□□□□ -0.68
SNX1-202ENST00000380285 ZPR1O75312 459 aa10.83□□□□□ -0.68
SNX1-202ENST00000380285 SNRPA1P09661 255 aaKnown RBP10.83□□□□□ -0.68
SNX1-202ENST00000380285 EVCP57679 992 aa10.83□□□□□ -0.68
SNX1-202ENST00000380285 DNAJC21Q5F1R6 531 aaKnown RBP10.83□□□□□ -0.68
SNX1-202ENST00000380285 DHX37Q8IY37 1157 aaKnown RBP10.83□□□□□ -0.68
SNX1-202ENST00000380285 PI4KAP1Q8N8J0 262 aa10.83□□□□□ -0.68
SNX1-202ENST00000380285 ZBTB40Q9NUA8 1239 aa10.83□□□□□ -0.68
SNX1-202ENST00000380285 DHX32Q7L7V1 743 aaKnown RBP10.83□□□□□ -0.68
SNX1-202ENST00000380285 IQUBQ8NA54 791 aa10.83□□□□□ -0.68
SNX1-202ENST00000380285 NUP58Q9BVL2 599 aa10.83□□□□□ -0.68
SNX1-202ENST00000380285 IFNKQ9P0W0 207 aa10.83□□□□□ -0.68
SNX1-202ENST00000380285 HLA-DOAP06340 250 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 LMOD1P29536 600 aaPredicted RBP10.82□□□□□ -0.68
SNX1-202ENST00000380285 ZBTB16Q05516 673 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 ZNF569Q5MCW4 686 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 NME9Q86XW9 330 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 NAPGQ99747 312 aaPredicted RBP10.82□□□□□ -0.68
SNX1-202ENST00000380285 RBM28Q9NW13 759 aaKnown RBP10.82□□□□□ -0.68
SNX1-202ENST00000380285 SYT10Q6XYQ8 523 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 SKAP1Q86WV1 359 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 MPHOSPH6Q99547 160 aaKnown RBP10.82□□□□□ -0.68
SNX1-202ENST00000380285 TSKSQ9UJT2 592 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 GRM8O00222 908 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 NOL3O60936 208 aaKnown RBP10.82□□□□□ -0.68
SNX1-202ENST00000380285 KRT2P35908 639 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 MXRA7P84157 204 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 UBXN1Q04323 297 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 SEPT6Q14141 434 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 CEP57Q86XR8 500 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 EMILIN1Q9Y6C2 1016 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 AK2P54819 239 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 LDHAL6AQ6ZMR3 332 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 CSRNP2Q9H175 543 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 ANKIB1Q9P2G1 1089 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 ANAPC4Q9UJX5 808 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 GRIPAP1Q4V328 841 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 CYP26C1Q6V0L0 522 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 CCDC82Q8N4S0 544 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 NECAB1Q8N987 351 aa10.82□□□□□ -0.68
SNX1-202ENST00000380285 SPINK5Q9NQ38 1064 aaPredicted RBP10.82□□□□□ -0.68
SNX1-202ENST00000380285 RUFY4Q6ZNE9 571 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms