RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 DDX60Q8IY21 1712 aaKnown RBP17.98■□□□□ 0.47
SNX2-201ENST00000379516 M0R2C6 588 aa17.98■□□□□ 0.47
SNX2-201ENST00000379516 RGL2O15211 777 aa17.98■□□□□ 0.47
SNX2-201ENST00000379516 SLC5A1P13866 664 aa17.98■□□□□ 0.47
SNX2-201ENST00000379516 PTMSP20962 102 aa17.98■□□□□ 0.47
SNX2-201ENST00000379516 RPS6KB1P23443 525 aa17.98■□□□□ 0.47
SNX2-201ENST00000379516 PHKA1P46020 1223 aa17.98■□□□□ 0.47
SNX2-201ENST00000379516 WASHC4Q2M389 1173 aa17.98■□□□□ 0.47
SNX2-201ENST00000379516 ZSCAN31Q96LW9 406 aaPredicted RBP17.98■□□□□ 0.47
SNX2-201ENST00000379516 LARGE1O95461 756 aa17.97■□□□□ 0.47
SNX2-201ENST00000379516 CYP21A2P08686 494 aa17.97■□□□□ 0.47
SNX2-201ENST00000379516 HSPD1P10809 573 aaKnown RBP17.97■□□□□ 0.47
SNX2-201ENST00000379516 FOXD4L5Q5VV16 416 aaPredicted RBP17.97■□□□□ 0.47
SNX2-201ENST00000379516 FOXD4L4Q8WXT5 416 aaPredicted RBP17.97■□□□□ 0.47
SNX2-201ENST00000379516 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.97■□□□□ 0.47
SNX2-201ENST00000379516 SNAP23O00161 211 aa17.96■□□□□ 0.47
SNX2-201ENST00000379516 TCEANC2Q96MN5 208 aa17.96■□□□□ 0.47
SNX2-201ENST00000379516 UQCRFS1P1P0C7P4 283 aa17.96■□□□□ 0.47
SNX2-201ENST00000379516 ARID4AP29374 1257 aaPredicted RBP17.96■□□□□ 0.47
SNX2-201ENST00000379516 MCTP1Q6DN14 999 aa17.96■□□□□ 0.47
SNX2-201ENST00000379516 NEK1Q96PY6 1258 aa17.96■□□□□ 0.47
SNX2-201ENST00000379516 SETDB2Q96T68 719 aa17.96■□□□□ 0.47
SNX2-201ENST00000379516 CDC5LQ99459 802 aaKnown RBP17.96■□□□□ 0.47
SNX2-201ENST00000379516 SH2B1Q9NRF2 756 aaPredicted RBP17.96■□□□□ 0.47
SNX2-201ENST00000379516 BRD1O95696 1058 aa17.95■□□□□ 0.46
SNX2-201ENST00000379516 ANKRD1Q15327 319 aa17.95■□□□□ 0.46
SNX2-201ENST00000379516 TTF1Q15361 905 aaPredicted RBP17.95■□□□□ 0.46
SNX2-201ENST00000379516 C3orf67Q6ZVT6 689 aa17.95■□□□□ 0.46
SNX2-201ENST00000379516 CCDC83Q8IWF9 413 aa17.95■□□□□ 0.46
SNX2-201ENST00000379516 ARHGEF1Q92888 912 aaKnown RBP17.95■□□□□ 0.46
SNX2-201ENST00000379516 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.95■□□□□ 0.463e-6■□□□□ 9
SNX2-201ENST00000379516 GZF1Q9H116 711 aaPredicted RBP17.95■□□□□ 0.46
SNX2-201ENST00000379516 AMIGO3Q86WK7 504 aa17.95■□□□□ 0.46
SNX2-201ENST00000379516 APPBP2Q92624 585 aa17.95■□□□□ 0.46
SNX2-201ENST00000379516 NYXQ9GZU5 481 aa17.95■□□□□ 0.46
SNX2-201ENST00000379516 TPCN1Q9ULQ1 816 aa17.95■□□□□ 0.46
SNX2-201ENST00000379516 CHRNDQ07001 517 aa17.94■□□□□ 0.46
SNX2-201ENST00000379516 SF3B3Q15393 1217 aaKnown RBP17.94■□□□□ 0.46
SNX2-201ENST00000379516 ME3Q16798 604 aa17.94■□□□□ 0.46
SNX2-201ENST00000379516 BCL11BQ9C0K0 894 aaPredicted RBP17.94■□□□□ 0.46
SNX2-201ENST00000379516 ALDH8A1Q9H2A2 487 aaPredicted RBP17.94■□□□□ 0.46
SNX2-201ENST00000379516 SMC3Q9UQE7 1217 aa17.94■□□□□ 0.46
SNX2-201ENST00000379516 SKOR2Q2VWA4 1001 aaPredicted RBP17.93■□□□□ 0.46
SNX2-201ENST00000379516 ZSCAN25Q6NSZ9 544 aa17.93■□□□□ 0.46
SNX2-201ENST00000379516 NBPF5PQ86XG9 351 aaPredicted RBP17.93■□□□□ 0.46
SNX2-201ENST00000379516 ANKRD18AQ8IVF6 992 aa17.93■□□□□ 0.46
SNX2-201ENST00000379516 PUS7LQ9H0K6 701 aaKnown RBP17.93■□□□□ 0.46
SNX2-201ENST00000379516 LAMB2P55268 1798 aa17.93■□□□□ 0.46
SNX2-201ENST00000379516 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
SNX2-201ENST00000379516 PHF14O94880 888 aa17.93■□□□□ 0.46
SNX2-201ENST00000379516 SLC10A5Q5PT55 438 aa17.93■□□□□ 0.46
SNX2-201ENST00000379516 PIH1D3Q9NQM4 214 aaKnown RBP17.93■□□□□ 0.46
SNX2-201ENST00000379516 IDH1O75874 414 aaKnown RBP17.92■□□□□ 0.46
SNX2-201ENST00000379516 TOB2Q14106 344 aaPredicted RBP17.92■□□□□ 0.46
SNX2-201ENST00000379516 SLC9C2Q5TAH2 1124 aa17.92■□□□□ 0.46
SNX2-201ENST00000379516 RFC4P35249 363 aa17.92■□□□□ 0.46
SNX2-201ENST00000379516 ADD2P35612 726 aa17.92■□□□□ 0.46
SNX2-201ENST00000379516 TRAPPC3LQ5T215 181 aa17.92■□□□□ 0.46
SNX2-201ENST00000379516 FAM196AQ6ZSG2 479 aa17.92■□□□□ 0.46
SNX2-201ENST00000379516 STOX1Q6ZVD7 989 aa17.92■□□□□ 0.46
SNX2-201ENST00000379516 NECAB1Q8N987 351 aa17.92■□□□□ 0.46
SNX2-201ENST00000379516 SPATA5Q8NB90 893 aa17.92■□□□□ 0.46
SNX2-201ENST00000379516 A0A0G2JLW4 131 aa17.9■□□□□ 0.46
SNX2-201ENST00000379516 BCAMP50895 628 aa17.9■□□□□ 0.46
SNX2-201ENST00000379516 TPTE2Q6XPS3 522 aa17.9■□□□□ 0.46
SNX2-201ENST00000379516 NLRP3Q96P20 1036 aa17.9■□□□□ 0.46
SNX2-201ENST00000379516 LRRC4BQ9NT99 713 aa17.9■□□□□ 0.46
SNX2-201ENST00000379516 WDR33Q9C0J8 1336 aaKnown RBP17.9■□□□□ 0.46
SNX2-201ENST00000379516 GPAA1O43292 621 aa17.9■□□□□ 0.46
SNX2-201ENST00000379516 GJB2P29033 226 aa17.9■□□□□ 0.46
SNX2-201ENST00000379516 ST3GAL1Q11201 340 aa17.9■□□□□ 0.46
SNX2-201ENST00000379516 RASGRF1Q13972 1273 aa17.9■□□□□ 0.46
SNX2-201ENST00000379516 TTLL5Q6EMB2 1281 aa17.9■□□□□ 0.46
SNX2-201ENST00000379516 CCDC24Q8N4L8 307 aa17.9■□□□□ 0.46
SNX2-201ENST00000379516 BSDC1Q9NW68 430 aaPredicted RBP17.9■□□□□ 0.46
SNX2-201ENST00000379516 CTNNA3Q9UI47 895 aa17.9■□□□□ 0.46
SNX2-201ENST00000379516 LY75O60449 1722 aa17.89■□□□□ 0.46
SNX2-201ENST00000379516 HMGB1P09429 215 aaKnown RBP17.89■□□□□ 0.45
SNX2-201ENST00000379516 Q6ZUG5 572 aa17.89■□□□□ 0.45
SNX2-201ENST00000379516 CHAMP1Q96JM3 812 aa17.89■□□□□ 0.45
SNX2-201ENST00000379516 AKAP11Q9UKA4 1901 aa17.89■□□□□ 0.45
SNX2-201ENST00000379516 SBF2Q86WG5 1849 aa17.89■□□□□ 0.45
SNX2-201ENST00000379516 COL4A1P02462 1669 aa17.89■□□□□ 0.45
SNX2-201ENST00000379516 E7EWF7 191 aa17.89■□□□□ 0.45
SNX2-201ENST00000379516 DTNBO60941 627 aa17.89■□□□□ 0.45
SNX2-201ENST00000379516 UBE3CQ15386 1083 aa17.89■□□□□ 0.45
SNX2-201ENST00000379516 CELF1Q92879 486 aaKnown RBP17.89■□□□□ 0.45
SNX2-201ENST00000379516 ARAP2Q8WZ64 1704 aa17.88■□□□□ 0.45
SNX2-201ENST00000379516 ZNF532Q9HCE3 1301 aa17.88■□□□□ 0.45
SNX2-201ENST00000379516 NPHP1O15259 732 aa17.88■□□□□ 0.45
SNX2-201ENST00000379516 FOXP2O15409 715 aa17.88■□□□□ 0.45
SNX2-201ENST00000379516 FGAP02671 866 aa17.88■□□□□ 0.45
SNX2-201ENST00000379516 FGD1P98174 961 aa17.88■□□□□ 0.45
SNX2-201ENST00000379516 DHX32Q7L7V1 743 aaKnown RBP17.88■□□□□ 0.45
SNX2-201ENST00000379516 LMBRD1Q9NUN5 540 aa17.88■□□□□ 0.45
SNX2-201ENST00000379516 WWC3Q9ULE0 1092 aa17.88■□□□□ 0.45
SNX2-201ENST00000379516 DDX49Q9Y6V7 483 aaKnown RBP17.88■□□□□ 0.45
SNX2-201ENST00000379516 C4BP0C0L5 1744 aa17.88■□□□□ 0.45
SNX2-201ENST00000379516 PDE6AP16499 860 aa17.87■□□□□ 0.45
SNX2-201ENST00000379516 SYT1P21579 422 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms