RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 USP17L4A6NCW7 530 aa17.42■□□□□ 0.38
PRPF18-202ENST00000378572 FLIIQ13045 1269 aa17.42■□□□□ 0.38
PRPF18-202ENST00000378572 ANGEL2Q5VTE6 544 aaKnown RBP17.42■□□□□ 0.38
PRPF18-202ENST00000378572 RGMBQ6NW40 437 aa17.42■□□□□ 0.38
PRPF18-202ENST00000378572 USP17L1Q7RTZ2 530 aa17.42■□□□□ 0.38
PRPF18-202ENST00000378572 POLR2AP24928 1970 aaKnown RBP17.42■□□□□ 0.38
PRPF18-202ENST00000378572 MED23Q9ULK4 1368 aa17.42■□□□□ 0.38
PRPF18-202ENST00000378572 USP17L8P0C7I0 530 aa17.41■□□□□ 0.38
PRPF18-202ENST00000378572 ZNF157P51786 506 aaPredicted RBP17.41■□□□□ 0.38
PRPF18-202ENST00000378572 SCARF1Q14162 830 aa17.41■□□□□ 0.38
PRPF18-202ENST00000378572 CDCA5Q96FF9 252 aa17.41■□□□□ 0.38
PRPF18-202ENST00000378572 BSDC1Q9NW68 430 aaPredicted RBP17.41■□□□□ 0.38
PRPF18-202ENST00000378572 CCDC85CA6NKD9 419 aa17.41■□□□□ 0.38
PRPF18-202ENST00000378572 KCNJ4P48050 445 aa17.41■□□□□ 0.38
PRPF18-202ENST00000378572 PODNQ7Z5L7 613 aa17.41■□□□□ 0.38
PRPF18-202ENST00000378572 MPHOSPH8Q99549 860 aa17.41■□□□□ 0.38
PRPF18-202ENST00000378572 MYOZ2Q9NPC6 264 aa17.41■□□□□ 0.38
PRPF18-202ENST00000378572 MINPP1Q9UNW1 487 aa17.41■□□□□ 0.38
PRPF18-202ENST00000378572 PSME4Q14997 1843 aa17.4■□□□□ 0.38
PRPF18-202ENST00000378572 CCT4P50991 539 aaKnown RBP17.4■□□□□ 0.38
PRPF18-202ENST00000378572 ZNF280AP59817 542 aaPredicted RBP17.4■□□□□ 0.38
PRPF18-202ENST00000378572 GCKRQ14397 625 aa17.4■□□□□ 0.38
PRPF18-202ENST00000378572 FAM161AQ3B820 660 aa17.4■□□□□ 0.38
PRPF18-202ENST00000378572 DNAAF4Q8WXU2 420 aa17.4■□□□□ 0.38
PRPF18-202ENST00000378572 CT47B1P0C2W7 299 aaPredicted RBP17.39■□□□□ 0.37
PRPF18-202ENST00000378572 ITGA6P23229 1130 aa17.39■□□□□ 0.37
PRPF18-202ENST00000378572 CCDC102AQ96A19 550 aa17.39■□□□□ 0.37
PRPF18-202ENST00000378572 ZIC5Q96T25 663 aa17.39■□□□□ 0.37
PRPF18-202ENST00000378572 CHMP3Q9Y3E7 222 aa17.39■□□□□ 0.37
PRPF18-202ENST00000378572 WTIPA6NIX2 430 aaPredicted RBP17.38■□□□□ 0.37
PRPF18-202ENST00000378572 H7C1W4 665 aa17.38■□□□□ 0.37
PRPF18-202ENST00000378572 OGFOD1Q8N543 542 aa17.38■□□□□ 0.37
PRPF18-202ENST00000378572 ZNF609O15014 1411 aa17.38■□□□□ 0.37
PRPF18-202ENST00000378572 MXD3Q9BW11 206 aa17.38■□□□□ 0.37
PRPF18-202ENST00000378572 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
PRPF18-202ENST00000378572 SCAF8Q9UPN6 1271 aaKnown RBP17.38■□□□□ 0.37
PRPF18-202ENST00000378572 EXOSC9Q06265 439 aaKnown RBP17.37■□□□□ 0.37
PRPF18-202ENST00000378572 TTLL12Q14166 644 aaPredicted RBP17.37■□□□□ 0.37
PRPF18-202ENST00000378572 LINS1Q8NG48 757 aa17.37■□□□□ 0.37
PRPF18-202ENST00000378572 ANKRD2Q9GZV1 360 aa17.37■□□□□ 0.37
PRPF18-202ENST00000378572 KIF23Q02241 960 aaPredicted RBP17.36■□□□□ 0.37
PRPF18-202ENST00000378572 COA1Q9GZY4 146 aa17.36■□□□□ 0.37
PRPF18-202ENST00000378572 LEMD3Q9Y2U8 911 aa17.36■□□□□ 0.37
PRPF18-202ENST00000378572 ZNF804BA4D1E1 1349 aa17.36■□□□□ 0.37
PRPF18-202ENST00000378572 ANKRD18BA2A2Z9 1011 aa17.35■□□□□ 0.37
PRPF18-202ENST00000378572 GMLQ99445 158 aa17.35■□□□□ 0.37
PRPF18-202ENST00000378572 CASP8AP2Q9UKL3 1982 aa17.35■□□□□ 0.37
PRPF18-202ENST00000378572 MYO3BQ8WXR4 1341 aa17.35■□□□□ 0.37
PRPF18-202ENST00000378572 FAM155AB1AL88 458 aaPredicted RBP17.35■□□□□ 0.37
PRPF18-202ENST00000378572 SASH1O94885 1247 aa17.35■□□□□ 0.37
PRPF18-202ENST00000378572 DGKZQ13574 1117 aa17.35■□□□□ 0.37
PRPF18-202ENST00000378572 DACT2Q5SW24 774 aa17.35■□□□□ 0.37
PRPF18-202ENST00000378572 SLC10A3P09131 477 aa17.34■□□□□ 0.37
PRPF18-202ENST00000378572 KLRK1P26718 216 aa17.34■□□□□ 0.37
PRPF18-202ENST00000378572 TAF7LQ5H9L4 462 aa17.34■□□□□ 0.37
PRPF18-202ENST00000378572 PLA2G12BQ9BX93 195 aa17.34■□□□□ 0.37
PRPF18-202ENST00000378572 PAPPA2Q9BXP8 1791 aa17.34■□□□□ 0.37
PRPF18-202ENST00000378572 PITPNM2Q9BZ72 1349 aa17.34■□□□□ 0.37
PRPF18-202ENST00000378572 MCOLN1Q9GZU1 580 aa17.34■□□□□ 0.37
PRPF18-202ENST00000378572 SUPT16HQ9Y5B9 1047 aaKnown RBP17.34■□□□□ 0.37
PRPF18-202ENST00000378572 F6X3S4 739 aa17.33■□□□□ 0.37
PRPF18-202ENST00000378572 CHRNDQ07001 517 aa17.33■□□□□ 0.37
PRPF18-202ENST00000378572 NBPF9Q3BBW0 867 aa17.33■□□□□ 0.37
PRPF18-202ENST00000378572 STRIP1Q5VSL9 837 aa17.33■□□□□ 0.37
PRPF18-202ENST00000378572 TXNRD3Q86VQ6 643 aa17.33■□□□□ 0.37
PRPF18-202ENST00000378572 KIAA0825Q8IV33 1275 aa17.33■□□□□ 0.37
PRPF18-202ENST00000378572 HDAC9Q9UKV0 1011 aa17.33■□□□□ 0.37
PRPF18-202ENST00000378572 CACNA1FO60840 1977 aa17.33■□□□□ 0.36
PRPF18-202ENST00000378572 VAMP4O75379 141 aa17.33■□□□□ 0.36
PRPF18-202ENST00000378572 TRPA1O75762 1119 aa17.33■□□□□ 0.36
PRPF18-202ENST00000378572 NF2P35240 595 aa17.33■□□□□ 0.36
PRPF18-202ENST00000378572 IFIT5Q13325 482 aaKnown RBP17.33■□□□□ 0.36
PRPF18-202ENST00000378572 PRAMEF18Q5VWM3 479 aa17.33■□□□□ 0.36
PRPF18-202ENST00000378572 TTLL5Q6EMB2 1281 aa17.33■□□□□ 0.36
PRPF18-202ENST00000378572 CASP7P55210 303 aa17.32■□□□□ 0.36
PRPF18-202ENST00000378572 FKBP1BP68106 108 aa17.32■□□□□ 0.36
PRPF18-202ENST00000378572 GTF2IP78347 998 aa17.32■□□□□ 0.36
PRPF18-202ENST00000378572 RASAL3Q86YV0 1011 aa17.32■□□□□ 0.36
PRPF18-202ENST00000378572 MOB2Q70IA6 237 aa17.31■□□□□ 0.36
PRPF18-202ENST00000378572 HELBQ8NG08 1087 aaPredicted RBP17.31■□□□□ 0.36
PRPF18-202ENST00000378572 SAGE1Q9NXZ1 904 aa17.31■□□□□ 0.36
PRPF18-202ENST00000378572 AKAP11Q9UKA4 1901 aa17.31■□□□□ 0.36
PRPF18-202ENST00000378572 UBE2Q2LH0YL09 131 aa17.3■□□□□ 0.36
PRPF18-202ENST00000378572 TAF5LO75529 589 aa17.3■□□□□ 0.36
PRPF18-202ENST00000378572 CSF1RP07333 972 aa17.3■□□□□ 0.36
PRPF18-202ENST00000378572 SLC4A10Q6U841 1118 aa17.3■□□□□ 0.36
PRPF18-202ENST00000378572 RNF186Q9NXI6 227 aa17.3■□□□□ 0.36
PRPF18-202ENST00000378572 WNT10BO00744 389 aa17.3■□□□□ 0.36
PRPF18-202ENST00000378572 PLIN1O60240 522 aa17.3■□□□□ 0.36
PRPF18-202ENST00000378572 PRKG1Q13976 671 aa17.3■□□□□ 0.36
PRPF18-202ENST00000378572 C9orf78Q9NZ63 289 aaPredicted RBP17.3■□□□□ 0.36
PRPF18-202ENST00000378572 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.3■□□□□ 0.36
PRPF18-202ENST00000378572 ZNF646O15015 1829 aaPredicted RBP17.29■□□□□ 0.36
PRPF18-202ENST00000378572 CCDC57Q2TAC2 916 aa17.29■□□□□ 0.36
PRPF18-202ENST00000378572 APOBEC3FQ8IUX4 373 aaKnown RBP17.29■□□□□ 0.36
PRPF18-202ENST00000378572 CNNM1Q9NRU3 951 aa17.29■□□□□ 0.36
PRPF18-202ENST00000378572 F8W031 263 aaPredicted RBP17.28■□□□□ 0.36
PRPF18-202ENST00000378572 SNAP23O00161 211 aa17.28■□□□□ 0.36
PRPF18-202ENST00000378572 MKRN3Q13064 507 aaKnown RBP17.28■□□□□ 0.36
PRPF18-202ENST00000378572 BEND3Q5T5X7 828 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms