RNA–Protein interactions for RNA: ENST00000378313.6

C19orf54-201, Transcript of chromosome 19 open reading frame 54, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf54, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-201ENST00000378313 SMC2O95347 1197 aa18.67■□□□□ 0.58
C19orf54-201ENST00000378313 PLPPR3Q6T4P5 718 aa18.67■□□□□ 0.58
C19orf54-201ENST00000378313 DHX32Q7L7V1 743 aaKnown RBP18.67■□□□□ 0.58
C19orf54-201ENST00000378313 UBXN4Q92575 508 aa18.67■□□□□ 0.58
C19orf54-201ENST00000378313 LTV1Q96GA3 475 aaPredicted RBP18.67■□□□□ 0.58
C19orf54-201ENST00000378313 AGXT2Q9BYV1 514 aa18.67■□□□□ 0.58
C19orf54-201ENST00000378313 PCDHA7Q9UN72 937 aa18.67■□□□□ 0.58
C19orf54-201ENST00000378313 RGPD8O14715 1765 aaPredicted RBP18.66■□□□□ 0.58
C19orf54-201ENST00000378313 TEFQ10587 303 aa18.66■□□□□ 0.58
C19orf54-201ENST00000378313 ZRSR1Q15695 479 aaKnown RBP18.66■□□□□ 0.58
C19orf54-201ENST00000378313 ILDR1Q86SU0 546 aaPredicted RBP18.66■□□□□ 0.58
C19orf54-201ENST00000378313 UBXN6Q9BZV1 441 aa18.66■□□□□ 0.58
C19orf54-201ENST00000378313 HEG1Q9ULI3 1381 aa18.66■□□□□ 0.58
C19orf54-201ENST00000378313 HNRNPH2P55795 449 aaKnown RBP18.65■□□□□ 0.58
C19orf54-201ENST00000378313 MCMDC2Q4G0Z9 681 aa18.65■□□□□ 0.58
C19orf54-201ENST00000378313 ZNF609O15014 1411 aa18.65■□□□□ 0.58
C19orf54-201ENST00000378313 MLECQ14165 292 aa18.65■□□□□ 0.58
C19orf54-201ENST00000378313 DPCR1Q3MIW9 517 aa18.65■□□□□ 0.58
C19orf54-201ENST00000378313 USHBP1Q8N6Y0 703 aa18.65■□□□□ 0.58
C19orf54-201ENST00000378313 EFCAB8A8MWE9 144 aa18.64■□□□□ 0.58
C19orf54-201ENST00000378313 NLRP12P59046 1061 aa18.64■□□□□ 0.58
C19orf54-201ENST00000378313 AKAP4Q5JQC9 854 aa18.64■□□□□ 0.58
C19orf54-201ENST00000378313 DDX58O95786 925 aaKnown RBP18.64■□□□□ 0.57
C19orf54-201ENST00000378313 PROSER3Q2NL68 480 aa18.64■□□□□ 0.57
C19orf54-201ENST00000378313 HOMER1Q86YM7 354 aa18.64■□□□□ 0.57
C19orf54-201ENST00000378313 TXLNBQ8N3L3 684 aa18.64■□□□□ 0.57
C19orf54-201ENST00000378313 LAMA4Q16363 1823 aa18.64■□□□□ 0.57
C19orf54-201ENST00000378313 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.64■□□□□ 0.57
C19orf54-201ENST00000378313 TADA3O75528 432 aa18.64■□□□□ 0.57
C19orf54-201ENST00000378313 EXOSC10Q01780 885 aaKnown RBP18.64■□□□□ 0.57
C19orf54-201ENST00000378313 CCDC158Q5M9N0 1113 aa18.64■□□□□ 0.57
C19orf54-201ENST00000378313 IKBKBO14920 756 aa18.63■□□□□ 0.57
C19orf54-201ENST00000378313 NCAPHQ15003 741 aa18.63■□□□□ 0.57
C19orf54-201ENST00000378313 TRIM65Q6PJ69 517 aa18.63■□□□□ 0.57
C19orf54-201ENST00000378313 STOX1Q6ZVD7 989 aa18.63■□□□□ 0.57
C19orf54-201ENST00000378313 FCHSD1Q86WN1 690 aa18.63■□□□□ 0.57
C19orf54-201ENST00000378313 ERCC4Q92889 916 aaPredicted RBP18.63■□□□□ 0.57
C19orf54-201ENST00000378313 EDC3Q96F86 508 aaKnown RBP18.63■□□□□ 0.57
C19orf54-201ENST00000378313 SIL1Q9H173 461 aa18.63■□□□□ 0.57
C19orf54-201ENST00000378313 DNAI1Q9UI46 699 aa18.63■□□□□ 0.57
C19orf54-201ENST00000378313 OVOS2A0A0G2JMS6 1433 aa18.63■□□□□ 0.57
C19orf54-201ENST00000378313 ANKARQ7Z5J8 1434 aa18.63■□□□□ 0.57
C19orf54-201ENST00000378313 NEDD4P46934 1319 aa18.63■□□□□ 0.57
C19orf54-201ENST00000378313 NDUFA8P51970 172 aa18.63■□□□□ 0.57
C19orf54-201ENST00000378313 PSME1Q06323 249 aa18.63■□□□□ 0.57
C19orf54-201ENST00000378313 LRRFIP1Q32MZ4 808 aaKnown RBP18.63■□□□□ 0.57
C19orf54-201ENST00000378313 MUM1L1Q5H9M0 696 aa18.63■□□□□ 0.57
C19orf54-201ENST00000378313 MNS1Q8NEH6 495 aa18.63■□□□□ 0.57
C19orf54-201ENST00000378313 ZNF274Q96GC6 653 aaPredicted RBP18.63■□□□□ 0.57
C19orf54-201ENST00000378313 LINC00301Q8NCQ3 95 aa18.62■□□□□ 0.57
C19orf54-201ENST00000378313 KCNG4Q8TDN1 519 aa18.62■□□□□ 0.57
C19orf54-201ENST00000378313 LRRC2Q9BYS8 371 aa18.62■□□□□ 0.57
C19orf54-201ENST00000378313 TMX1Q9H3N1 280 aa18.62■□□□□ 0.57
C19orf54-201ENST00000378313 SH3TC1Q8TE82 1336 aa18.62■□□□□ 0.57
C19orf54-201ENST00000378313 A0A1B0GVL5 298 aa18.62■□□□□ 0.57
C19orf54-201ENST00000378313 APOBRQ0VD83 1088 aa18.62■□□□□ 0.57
C19orf54-201ENST00000378313 ESF1Q9H501 851 aaKnown RBP18.62■□□□□ 0.57
C19orf54-201ENST00000378313 YEATS4O95619 227 aa18.61■□□□□ 0.57
C19orf54-201ENST00000378313 FBXW7Q969H0 707 aa18.61■□□□□ 0.57
C19orf54-201ENST00000378313 COPRSQ9NQ92 184 aa18.61■□□□□ 0.57
C19orf54-201ENST00000378313 DBNLQ9UJU6 430 aaKnown RBP18.61■□□□□ 0.57
C19orf54-201ENST00000378313 SLC3A2P08195 630 aaKnown RBP18.61■□□□□ 0.57
C19orf54-201ENST00000378313 FOSBP53539 338 aa18.61■□□□□ 0.57
C19orf54-201ENST00000378313 FANCCQ00597 558 aa18.61■□□□□ 0.57
C19orf54-201ENST00000378313 CCDC129Q6ZRS4 1044 aa18.61■□□□□ 0.57
C19orf54-201ENST00000378313 TICAM2Q86XR7 235 aa18.61■□□□□ 0.57
C19orf54-201ENST00000378313 IP6K1Q92551 441 aa18.61■□□□□ 0.57
C19orf54-201ENST00000378313 CARMIL3Q8ND23 1372 aa18.61■□□□□ 0.57
C19orf54-201ENST00000378313 SYTL4Q96C24 671 aaPredicted RBP18.6■□□□□ 0.57
C19orf54-201ENST00000378313 HAUS7Q99871 368 aa18.6■□□□□ 0.57
C19orf54-201ENST00000378313 POLR3EQ9NVU0 708 aa18.6■□□□□ 0.57
C19orf54-201ENST00000378313 TNNI3KQ59H18 835 aa18.6■□□□□ 0.57
C19orf54-201ENST00000378313 TRIM34Q9BYJ4 488 aa18.6■□□□□ 0.57
C19orf54-201ENST00000378313 FEZ2Q9UHY8 353 aaPredicted RBP18.6■□□□□ 0.57
C19orf54-201ENST00000378313 FPGT-TNNI3KV9GXZ4 949 aa18.6■□□□□ 0.57
C19orf54-201ENST00000378313 CBFA2T2O43439 604 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 LTKP29376 864 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 DSCC1Q9BVC3 393 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 AMOTL2Q9Y2J4 779 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 LTN1O94822 1766 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 ZSCAN12O43309 604 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 PDIA3P30101 505 aaKnown RBP18.59■□□□□ 0.57
C19orf54-201ENST00000378313 STK38Q15208 465 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 NBPF6Q5VWK0 638 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 REXO1L1PQ8IX06 675 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 NBPF4Q96M43 638 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 DDX21Q9NR30 783 aaKnown RBP eCLIP18.59■□□□□ 0.57
C19orf54-201ENST00000378313 PARP3Q9Y6F1 533 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 RNMTO43148 476 aaKnown RBP18.59■□□□□ 0.57
C19orf54-201ENST00000378313 MYO1BO43795 1136 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 CCT2P78371 535 aaKnown RBP18.59■□□□□ 0.57
C19orf54-201ENST00000378313 SF3A1Q15459 793 aaKnown RBP18.59■□□□□ 0.57
C19orf54-201ENST00000378313 PLEKHO1Q53GL0 409 aaPredicted RBP18.59■□□□□ 0.57
C19orf54-201ENST00000378313 GORABQ5T7V8 394 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 ZNF530Q6P9A1 599 aaPredicted RBP18.59■□□□□ 0.57
C19orf54-201ENST00000378313 FBXL16Q8N461 479 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 ABTB2Q8N961 1025 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 SEC62Q99442 399 aaKnown RBP18.59■□□□□ 0.57
C19orf54-201ENST00000378313 MPHOSPH8Q99549 860 aa18.59■□□□□ 0.57
C19orf54-201ENST00000378313 IGKV5-2P06315 115 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms