RNA–Protein interactions for RNA: ENST00000375472.7

SUSD3-202, Transcript of sushi domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD3, Length 1,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-202ENST00000375472 TXNRD3Q86VQ6 643 aa28.55■■■□□ 2.16
SUSD3-202ENST00000375472 VGLL2Q8N8G2 317 aa28.55■■■□□ 2.16
SUSD3-202ENST00000375472 IRS2Q9Y4H2 1338 aa28.54■■■□□ 2.16
SUSD3-202ENST00000375472 ATG9AQ7Z3C6 839 aa28.54■■■□□ 2.16
SUSD3-202ENST00000375472 ZNF804AQ7Z570 1209 aa28.54■■■□□ 2.16
SUSD3-202ENST00000375472 SNAP23O00161 211 aa28.53■■■□□ 2.16
SUSD3-202ENST00000375472 PSMD14O00487 310 aa28.53■■■□□ 2.16
SUSD3-202ENST00000375472 RPS12P25398 132 aaKnown RBP28.53■■■□□ 2.16
SUSD3-202ENST00000375472 SIL1Q9H173 461 aa28.53■■■□□ 2.16
SUSD3-202ENST00000375472 CEP126Q9P2H0 1117 aa28.53■■■□□ 2.16
SUSD3-202ENST00000375472 VIL1P09327 827 aaKnown RBP28.52■■■□□ 2.16
SUSD3-202ENST00000375472 KLRK1P26718 216 aa28.52■■■□□ 2.16
SUSD3-202ENST00000375472 SCNN1DP51172 638 aa28.52■■■□□ 2.16
SUSD3-202ENST00000375472 PUM3Q15397 648 aaKnown RBP28.52■■■□□ 2.16
SUSD3-202ENST00000375472 PNMA8AQ86V59 439 aaPredicted RBP28.52■■■□□ 2.16
SUSD3-202ENST00000375472 RBM46Q8TBY0 533 aaKnown RBP28.52■■■□□ 2.16
SUSD3-202ENST00000375472 DPF2Q92785 391 aa28.52■■■□□ 2.16
SUSD3-202ENST00000375472 TAF1DQ9H5J8 278 aaPredicted RBP28.52■■■□□ 2.16
SUSD3-202ENST00000375472 PA2G4Q9UQ80 394 aaKnown RBP28.52■■■□□ 2.16
SUSD3-202ENST00000375472 PNMA6EA0A0J9YXQ4 647 aa28.51■■■□□ 2.15
SUSD3-202ENST00000375472 USP17L3A6NCW0 530 aa28.51■■■□□ 2.15
SUSD3-202ENST00000375472 USP17L4A6NCW7 530 aa28.51■■■□□ 2.15
SUSD3-202ENST00000375472 GMPSP49915 693 aaPredicted RBP28.51■■■□□ 2.15
SUSD3-202ENST00000375472 RRP1P56182 461 aaKnown RBP28.51■■■□□ 2.15
SUSD3-202ENST00000375472 POLA2Q14181 598 aa28.51■■■□□ 2.15
SUSD3-202ENST00000375472 USP17L1Q7RTZ2 530 aa28.51■■■□□ 2.15
SUSD3-202ENST00000375472 SSH3Q8TE77 659 aa28.51■■■□□ 2.15
SUSD3-202ENST00000375472 C1orf115Q9H7X2 142 aa28.51■■■□□ 2.15
SUSD3-202ENST00000375472 CD209Q9NNX6 404 aa28.51■■■□□ 2.15
SUSD3-202ENST00000375472 ZBTB40Q9NUA8 1239 aa28.51■■■□□ 2.15
SUSD3-202ENST00000375472 GPRC5DQ9NZD1 345 aa28.51■■■□□ 2.15
SUSD3-202ENST00000375472 EPHX2P34913 555 aa28.5■■■□□ 2.15
SUSD3-202ENST00000375472 C20orf194Q5TEA3 1177 aa28.5■■■□□ 2.15
SUSD3-202ENST00000375472 KCNQ5Q9NR82 932 aa28.5■■■□□ 2.15
SUSD3-202ENST00000375472 IFIT1P09914 478 aaKnown RBP28.49■■■□□ 2.15
SUSD3-202ENST00000375472 C1QTNF8P60827 252 aa28.49■■■□□ 2.15
SUSD3-202ENST00000375472 STRIP1Q5VSL9 837 aa28.49■■■□□ 2.15
SUSD3-202ENST00000375472 ZNF609O15014 1411 aa28.49■■■□□ 2.15
SUSD3-202ENST00000375472 IL1R1P14778 569 aa28.48■■■□□ 2.15
SUSD3-202ENST00000375472 FGFR2P21802 821 aa28.48■■■□□ 2.15
SUSD3-202ENST00000375472 G3BP1Q13283 466 aaKnown RBP eCLIP28.48■■■□□ 2.15
SUSD3-202ENST00000375472 CAVIN4Q5BKX8 364 aa28.48■■■□□ 2.15
SUSD3-202ENST00000375472 CEP85Q6P2H3 762 aa28.48■■■□□ 2.15
SUSD3-202ENST00000375472 RSBN1LQ6PCB5 846 aaPredicted RBP28.48■■■□□ 2.15
SUSD3-202ENST00000375472 AGBL3Q8NEM8 1001 aa28.48■■■□□ 2.15
SUSD3-202ENST00000375472 LPIN2Q92539 896 aa28.48■■■□□ 2.15
SUSD3-202ENST00000375472 SCN9AQ15858 1988 aa28.48■■■□□ 2.15
SUSD3-202ENST00000375472 SLC5A1P13866 664 aa28.47■■■□□ 2.15
SUSD3-202ENST00000375472 HIBADHP31937 336 aaKnown RBP28.47■■■□□ 2.15
SUSD3-202ENST00000375472 RPAP2Q8IXW5 612 aaPredicted RBP28.47■■■□□ 2.15
SUSD3-202ENST00000375472 ADARB2Q9NS39 739 aaKnown RBP28.47■■■□□ 2.15
SUSD3-202ENST00000375472 PSME4Q14997 1843 aa28.47■■■□□ 2.15
SUSD3-202ENST00000375472 MYO3BQ8WXR4 1341 aa28.46■■■□□ 2.15
SUSD3-202ENST00000375472 H7C1D1 291 aa28.46■■■□□ 2.15
SUSD3-202ENST00000375472 FSTL1Q12841 308 aa28.46■■■□□ 2.15
SUSD3-202ENST00000375472 USP50Q70EL3 339 aaPredicted RBP28.46■■■□□ 2.15
SUSD3-202ENST00000375472 VPS37DQ86XT2 251 aa28.46■■■□□ 2.15
SUSD3-202ENST00000375472 SMC1BQ8NDV3 1235 aa28.46■■■□□ 2.15
SUSD3-202ENST00000375472 FAM84BQ96KN1 310 aaPredicted RBP28.46■■■□□ 2.15
SUSD3-202ENST00000375472 CNOT7Q9UIV1 285 aaKnown RBP28.46■■■□□ 2.15
SUSD3-202ENST00000375472 ZBTB12Q9Y330 459 aaPredicted RBP28.46■■■□□ 2.15
SUSD3-202ENST00000375472 EPS15P42566 896 aa28.45■■■□□ 2.14
SUSD3-202ENST00000375472 TTLL5Q6EMB2 1281 aa28.45■■■□□ 2.14
SUSD3-202ENST00000375472 AKAP2Q9Y2D5 859 aa28.45■■■□□ 2.14
SUSD3-202ENST00000375472 MMP14P50281 582 aa28.44■■■□□ 2.14
SUSD3-202ENST00000375472 ATP2B3Q16720 1220 aa28.44■■■□□ 2.14
SUSD3-202ENST00000375472 DACT2Q5SW24 774 aa28.44■■■□□ 2.14
SUSD3-202ENST00000375472 FBXO33Q7Z6M2 555 aa28.44■■■□□ 2.14
SUSD3-202ENST00000375472 LDHDQ86WU2 507 aa28.44■■■□□ 2.14
SUSD3-202ENST00000375472 SASH1O94885 1247 aa28.43■■■□□ 2.14
SUSD3-202ENST00000375472 GYG1P46976 350 aa28.43■■■□□ 2.14
SUSD3-202ENST00000375472 TDRD7Q8NHU6 1098 aaKnown RBP28.43■■■□□ 2.14
SUSD3-202ENST00000375472 NOP58Q9Y2X3 529 aaKnown RBP28.43■■■□□ 2.14
SUSD3-202ENST00000375472 HMMRO75330 724 aa28.42■■■□□ 2.14
SUSD3-202ENST00000375472 GTF2IP78347 998 aa28.42■■■□□ 2.14
SUSD3-202ENST00000375472 EAPPQ56P03 285 aaPredicted RBP28.42■■■□□ 2.14
SUSD3-202ENST00000375472 MICALL2Q8IY33 904 aa28.42■■■□□ 2.14
SUSD3-202ENST00000375472 FBXW7Q969H0 707 aa28.42■■■□□ 2.14
SUSD3-202ENST00000375472 SURF6O75683 361 aaKnown RBP28.41■■■□□ 2.14
SUSD3-202ENST00000375472 FKBP1AP62942 108 aaKnown RBP28.41■■■□□ 2.14
SUSD3-202ENST00000375472 CHADLQ6NUI6 762 aa28.41■■■□□ 2.14
SUSD3-202ENST00000375472 GMLQ99445 158 aa28.41■■■□□ 2.14
SUSD3-202ENST00000375472 TFCP2Q12800 502 aa28.39■■■□□ 2.14
SUSD3-202ENST00000375472 OS9Q13438 667 aaPredicted RBP28.39■■■□□ 2.14
SUSD3-202ENST00000375472 CLEC11AQ9Y240 323 aa28.39■■■□□ 2.14
SUSD3-202ENST00000375472 FAM205AQ6ZU69 1335 aa28.39■■■□□ 2.13
SUSD3-202ENST00000375472 USP17L8P0C7I0 530 aa28.38■■■□□ 2.13
SUSD3-202ENST00000375472 HSP90AB4PQ58FF6 505 aa28.38■■■□□ 2.13
SUSD3-202ENST00000375472 BCAMP50895 628 aa28.37■■■□□ 2.13
SUSD3-202ENST00000375472 ZNF280AP59817 542 aaPredicted RBP28.37■■■□□ 2.13
SUSD3-202ENST00000375472 OGFOD1Q8N543 542 aa28.37■■■□□ 2.13
SUSD3-202ENST00000375472 GPR108Q9NPR9 543 aa28.37■■■□□ 2.13
SUSD3-202ENST00000375472 GNL3LQ9NVN8 582 aaKnown RBP28.37■■■□□ 2.13
SUSD3-202ENST00000375472 ZBTB22O15209 634 aa28.36■■■□□ 2.13
SUSD3-202ENST00000375472 FRAT2O75474 233 aaPredicted RBP28.36■■■□□ 2.13
SUSD3-202ENST00000375472 POTEIP0CG38 1075 aa28.36■■■□□ 2.13
SUSD3-202ENST00000375472 POTEJP0CG39 1038 aa28.36■■■□□ 2.13
SUSD3-202ENST00000375472 ERC1Q8IUD2 1116 aa28.36■■■□□ 2.13
SUSD3-202ENST00000375472 ZC3H15Q8WU90 426 aaKnown RBP28.36■■■□□ 2.13
SUSD3-202ENST00000375472 ADAMTSL1Q8N6G6 1762 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms