RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 SPINK5Q9NQ38 1064 aaPredicted RBP9.45□□□□□ -0.9
HSPG2-203ENST00000374695 IL1RAPL2Q9NP60 686 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 SLC52A1Q9NWF4 448 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 CFTRP13569 1480 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 NEDD9Q14511 834 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 NOLC1Q14978 699 aaKnown RBP eCLIP9.45□□□□□ -0.98e-6■■□□□ 11.9
HSPG2-203ENST00000374695 AFAP1L1Q8TED9 768 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 SATB1Q01826 763 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 ZSWIM4Q9H7M6 989 aa9.45□□□□□ -0.9
HSPG2-203ENST00000374695 STK10O94804 968 aaKnown RBP9.44□□□□□ -0.9
HSPG2-203ENST00000374695 EEF2P13639 858 aaKnown RBP9.44□□□□□ -0.9
HSPG2-203ENST00000374695 ZGPATQ8N5A5 531 aaKnown RBP9.44□□□□□ -0.9
HSPG2-203ENST00000374695 BOLA2Q9H3K6 86 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 EXOC6BQ9Y2D4 811 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 SSFA2P28290 1259 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 CEP85LQ5SZL2 805 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 PLCB1Q9NQ66 1216 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 KDM5AP29375 1690 aaKnown RBP9.44□□□□□ -0.9
HSPG2-203ENST00000374695 CETN3O15182 167 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 MGEA5O60502 916 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 NUMA1Q14980 2115 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 UTP11Q9Y3A2 253 aaKnown RBP9.44□□□□□ -0.9
HSPG2-203ENST00000374695 INF2Q27J81 1249 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 BIN1O00499 593 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 MAP3K21Q5TCX8 1036 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 ANKRD24Q8TF21 1146 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 RPGRQ92834 1020 aaKnown RBP9.44□□□□□ -0.9
HSPG2-203ENST00000374695 TCHHQ07283 1943 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 RASSF2P50749 326 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 LRCH2Q5VUJ6 765 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 DUSP27Q5VZP5 1158 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.44□□□□□ -0.9
HSPG2-203ENST00000374695 CACYBPQ9HB71 228 aaKnown RBP9.44□□□□□ -0.9
HSPG2-203ENST00000374695 PIK3R4Q99570 1358 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 ZSCAN22P10073 491 aaPredicted RBP9.44□□□□□ -0.9
HSPG2-203ENST00000374695 CALML3P27482 149 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 TMX1Q9H3N1 280 aa9.44□□□□□ -0.9
HSPG2-203ENST00000374695 GIPC1O14908 333 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 MAP2K2P36507 400 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 ANO6Q4KMQ2 910 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 PPP1R2P41236 205 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 TBC1D2Q9BYX2 928 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 ATP6V0A2Q9Y487 856 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 KIF1CO43896 1103 aaKnown RBP9.43□□□□□ -0.9
HSPG2-203ENST00000374695 ZNF365Q70YC5 407 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 I3L4J1 428 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 SLFN5Q08AF3 891 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 CCDC117Q8IWD4 279 aaPredicted RBP9.43□□□□□ -0.9
HSPG2-203ENST00000374695 HAUS8Q9BT25 410 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 PFDN4Q9NQP4 134 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 RTL1A6NKG5 1358 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 LDHCP07864 332 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 RRAGBQ5VZM2 374 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 FAM169AQ9Y6X4 670 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 MCUR1Q96AQ8 359 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 WHAMMP3Q1A5X7 153 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 PHACTR2O75167 634 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 PPFIA1Q13136 1202 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 VWA3BQ502W6 1294 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 MRPS27Q92552 414 aaKnown RBP9.43□□□□□ -0.9
HSPG2-203ENST00000374695 ORC3Q9UBD5 711 aaPredicted RBP9.43□□□□□ -0.9
HSPG2-203ENST00000374695 ZEB2O60315 1214 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 NBPF8Q3BBV2 869 aa9.43□□□□□ -0.9
HSPG2-203ENST00000374695 TAF7Q15545 349 aaPredicted RBP9.42□□□□□ -0.9
HSPG2-203ENST00000374695 CDC5LQ99459 802 aaKnown RBP9.42□□□□□ -0.9
HSPG2-203ENST00000374695 USP16Q9Y5T5 823 aa9.42□□□□□ -0.9
HSPG2-203ENST00000374695 ACTN4O43707 911 aaKnown RBP9.42□□□□□ -0.9
HSPG2-203ENST00000374695 XRCC6P12956 609 aaKnown RBP eCLIP9.42□□□□□ -0.92e-10■■■■■ 57.5
HSPG2-203ENST00000374695 ZNF354CQ86Y25 554 aa9.42□□□□□ -0.9
HSPG2-203ENST00000374695 HVCN1Q96D96 273 aa9.42□□□□□ -0.9
HSPG2-203ENST00000374695 UBL4BQ8N7F7 174 aa9.42□□□□□ -0.9
HSPG2-203ENST00000374695 TACC3Q9Y6A5 838 aa9.42□□□□□ -0.9
HSPG2-203ENST00000374695 KIFAP3Q92845 792 aa9.42□□□□□ -0.9
HSPG2-203ENST00000374695 HCLS1P14317 486 aaPredicted RBP9.42□□□□□ -0.9
HSPG2-203ENST00000374695 CLNS1AP54105 237 aaKnown RBP9.42□□□□□ -0.9
HSPG2-203ENST00000374695 CCT2P78371 535 aaKnown RBP9.42□□□□□ -0.9
HSPG2-203ENST00000374695 BANK1Q8NDB2 785 aa9.42□□□□□ -0.9
HSPG2-203ENST00000374695 WTAPQ15007 396 aa9.42□□□□□ -0.9
HSPG2-203ENST00000374695 KCNK9Q9NPC2 374 aa9.42□□□□□ -0.9
HSPG2-203ENST00000374695 IFT20Q8IY31 132 aa9.42□□□□□ -0.9
HSPG2-203ENST00000374695 NEK1Q96PY6 1258 aa9.42□□□□□ -0.9
HSPG2-203ENST00000374695 CCDC170Q8IYT3 715 aa9.42□□□□□ -0.9
HSPG2-203ENST00000374695 PPP1R1BQ9UD71 204 aaPredicted RBP9.42□□□□□ -0.9
HSPG2-203ENST00000374695 RTN1Q16799 776 aa9.42□□□□□ -0.9
HSPG2-203ENST00000374695 GEN1Q17RS7 908 aa9.42□□□□□ -0.9
HSPG2-203ENST00000374695 ATL3Q6DD88 541 aa9.42□□□□□ -0.9
HSPG2-203ENST00000374695 RPL13P26373 211 aaKnown RBP9.42□□□□□ -0.9
HSPG2-203ENST00000374695 RFC1P35251 1148 aaPredicted RBP9.42□□□□□ -0.9
HSPG2-203ENST00000374695 PRR16Q569H4 304 aa9.41□□□□□ -0.9
HSPG2-203ENST00000374695 TBC1D32Q96NH3 1257 aa9.41□□□□□ -0.9
HSPG2-203ENST00000374695 FAM13AO94988 1023 aa9.41□□□□□ -0.9
HSPG2-203ENST00000374695 RUFY4Q6ZNE9 571 aa9.41□□□□□ -0.9
HSPG2-203ENST00000374695 SLC26A6Q9BXS9 759 aa9.41□□□□□ -0.9
HSPG2-203ENST00000374695 CABP5Q9NP86 173 aa9.41□□□□□ -0.9
HSPG2-203ENST00000374695 PRDM11Q9NQV5 511 aa9.41□□□□□ -0.9
HSPG2-203ENST00000374695 ECHDC1Q9NTX5 307 aa9.41□□□□□ -0.9
HSPG2-203ENST00000374695 DNAJC8O75937 253 aaPredicted RBP9.41□□□□□ -0.9
HSPG2-203ENST00000374695 CALM1P0DP23 149 aa9.41□□□□□ -0.9
HSPG2-203ENST00000374695 CALM2P0DP24 149 aa9.41□□□□□ -0.9
HSPG2-203ENST00000374695 CALM3P0DP25 149 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms