RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 A0A0G2JLW4 131 aa18.52■□□□□ 0.55
PABPC4-201ENST00000372856 ANKLE2Q86XL3 938 aa18.52■□□□□ 0.55
PABPC4-201ENST00000372856 NSUN7Q8NE18 718 aaKnown RBP18.52■□□□□ 0.55
PABPC4-201ENST00000372856 HAUS7Q99871 368 aa18.52■□□□□ 0.55
PABPC4-201ENST00000372856 RSPH14Q9UHP6 348 aa18.52■□□□□ 0.55
PABPC4-201ENST00000372856 ADD1P35611 737 aaKnown RBP18.51■□□□□ 0.55
PABPC4-201ENST00000372856 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.51■□□□□ 0.55
PABPC4-201ENST00000372856 CCDC112Q8NEF3 446 aa18.51■□□□□ 0.55
PABPC4-201ENST00000372856 ERCC4Q92889 916 aaPredicted RBP18.51■□□□□ 0.55
PABPC4-201ENST00000372856 FBXW7Q969H0 707 aa18.51■□□□□ 0.55
PABPC4-201ENST00000372856 GOLPH3LQ9H4A5 285 aa18.51■□□□□ 0.55
PABPC4-201ENST00000372856 PTPDC1A2A3K4 754 aa18.51■□□□□ 0.55
PABPC4-201ENST00000372856 GOLIM4O00461 696 aa18.51■□□□□ 0.55
PABPC4-201ENST00000372856 CTDNEP1O95476 244 aa18.51■□□□□ 0.55
PABPC4-201ENST00000372856 TPD52L1Q16890 204 aaPredicted RBP18.51■□□□□ 0.55
PABPC4-201ENST00000372856 CHST3Q7LGC8 479 aa18.51■□□□□ 0.55
PABPC4-201ENST00000372856 SMARCC2Q8TAQ2 1214 aa18.51■□□□□ 0.55
PABPC4-201ENST00000372856 RAD51AP2Q09MP3 1159 aa18.5■□□□□ 0.55
PABPC4-201ENST00000372856 IQCB1Q15051 598 aa18.5■□□□□ 0.55
PABPC4-201ENST00000372856 USP28Q96RU2 1077 aa18.5■□□□□ 0.55
PABPC4-201ENST00000372856 PFKFB2O60825 505 aa18.5■□□□□ 0.55
PABPC4-201ENST00000372856 LMBR1LQ6UX01 489 aa18.5■□□□□ 0.55
PABPC4-201ENST00000372856 KMT5BQ4FZB7 885 aa18.49■□□□□ 0.55
PABPC4-201ENST00000372856 DHX32Q7L7V1 743 aaKnown RBP18.49■□□□□ 0.55
PABPC4-201ENST00000372856 KBTBD3Q8NAB2 608 aa18.49■□□□□ 0.55
PABPC4-201ENST00000372856 LRP10Q7Z4F1 713 aa18.49■□□□□ 0.55
PABPC4-201ENST00000372856 ERBB3P21860 1342 aa18.49■□□□□ 0.55
PABPC4-201ENST00000372856 TIMM10P62072 90 aa18.49■□□□□ 0.55
PABPC4-201ENST00000372856 TTC5Q8N0Z6 440 aa18.49■□□□□ 0.55
PABPC4-201ENST00000372856 RCOR1Q9UKL0 485 aa18.49■□□□□ 0.55
PABPC4-201ENST00000372856 MRC1P22897 1456 aa18.48■□□□□ 0.55
PABPC4-201ENST00000372856 BECN2A8MW95 431 aa18.48■□□□□ 0.55
PABPC4-201ENST00000372856 PHKG2P15735 406 aa18.48■□□□□ 0.55
PABPC4-201ENST00000372856 RABL6Q3YEC7 729 aaPredicted RBP18.48■□□□□ 0.55
PABPC4-201ENST00000372856 KDM6AO15550 1401 aaPredicted RBP18.48■□□□□ 0.55
PABPC4-201ENST00000372856 LOC102724159A0A0B4J2E5 919 aa18.48■□□□□ 0.55
PABPC4-201ENST00000372856 SNRPA1P09661 255 aaKnown RBP18.48■□□□□ 0.55
PABPC4-201ENST00000372856 PWP2Q15269 919 aaKnown RBP18.48■□□□□ 0.55
PABPC4-201ENST00000372856 CCDC73Q6ZRK6 1079 aa18.48■□□□□ 0.55
PABPC4-201ENST00000372856 KRT28Q7Z3Y7 464 aa18.48■□□□□ 0.55
PABPC4-201ENST00000372856 ME1P48163 572 aa18.47■□□□□ 0.55
PABPC4-201ENST00000372856 FILIP1Q7Z7B0 1213 aa18.47■□□□□ 0.55
PABPC4-201ENST00000372856 LLPHQ9BRT6 129 aaKnown RBP18.47■□□□□ 0.55
PABPC4-201ENST00000372856 SMTNL1A8MU46 457 aa18.47■□□□□ 0.55
PABPC4-201ENST00000372856 APPP05067 770 aa18.47■□□□□ 0.55
PABPC4-201ENST00000372856 STX1AQ16623 288 aa18.47■□□□□ 0.55
PABPC4-201ENST00000372856 NAA16Q6N069 864 aaPredicted RBP18.47■□□□□ 0.55
PABPC4-201ENST00000372856 NOL10Q9BSC4 688 aaKnown RBP18.47■□□□□ 0.55
PABPC4-201ENST00000372856 KINO60870 393 aaKnown RBP18.47■□□□□ 0.55
PABPC4-201ENST00000372856 SNW1Q13573 536 aaKnown RBP18.47■□□□□ 0.55
PABPC4-201ENST00000372856 TSPYL1Q9H0U9 437 aa18.47■□□□□ 0.55
PABPC4-201ENST00000372856 USP27XA6NNY8 438 aa18.46■□□□□ 0.55
PABPC4-201ENST00000372856 TATP17735 454 aaPredicted RBP18.46■□□□□ 0.55
PABPC4-201ENST00000372856 LRRC8AQ8IWT6 810 aa18.46■□□□□ 0.55
PABPC4-201ENST00000372856 FSIP1Q8NA03 581 aa18.46■□□□□ 0.55
PABPC4-201ENST00000372856 PAG1Q9NWQ8 432 aa18.46■□□□□ 0.55
PABPC4-201ENST00000372856 CAVIN2O95810 425 aa18.46■□□□□ 0.55
PABPC4-201ENST00000372856 HMGB1P09429 215 aaKnown RBP18.46■□□□□ 0.55
PABPC4-201ENST00000372856 E7EWF7 191 aa18.45■□□□□ 0.54
PABPC4-201ENST00000372856 SH3TC1Q8TE82 1336 aa18.45■□□□□ 0.54
PABPC4-201ENST00000372856 CTAGE5O15320 804 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 EXOSC10Q01780 885 aaKnown RBP18.44■□□□□ 0.54
PABPC4-201ENST00000372856 TTLL5Q6EMB2 1281 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 C10orf67Q8IYJ2 551 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 FER1L4A9Z1Z3 1794 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 MYCNP04198 464 aaPredicted RBP18.44■□□□□ 0.54
PABPC4-201ENST00000372856 CSB-PGBD3P0DP91 1061 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 CDC25BP30305 580 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 GYS2P54840 703 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 OTUD7BQ6GQQ9 843 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 NEK11Q8NG66 645 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 GPHNQ9NQX3 736 aaPredicted RBP18.44■□□□□ 0.54
PABPC4-201ENST00000372856 HSPD1P10809 573 aaKnown RBP18.44■□□□□ 0.54
PABPC4-201ENST00000372856 SKILP12757 684 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 CASP7P55210 303 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 RBM6P78332 1123 aaKnown RBP18.44■□□□□ 0.54
PABPC4-201ENST00000372856 FBXO38Q6PIJ6 1188 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 SARM1Q6SZW1 724 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 ILDR1Q86SU0 546 aaPredicted RBP18.44■□□□□ 0.54
PABPC4-201ENST00000372856 ZNF397Q8NF99 534 aaPredicted RBP18.44■□□□□ 0.54
PABPC4-201ENST00000372856 ENGASEQ8NFI3 743 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 MRFAP1L1Q96HT8 127 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 ZNF396Q96N95 335 aaPredicted RBP18.44■□□□□ 0.54
PABPC4-201ENST00000372856 TRMT1Q9NXH9 659 aaKnown RBP18.44■□□□□ 0.54
PABPC4-201ENST00000372856 RFX7Q2KHR2 1363 aa18.44■□□□□ 0.54
PABPC4-201ENST00000372856 PDIA3P30101 505 aaKnown RBP18.43■□□□□ 0.54
PABPC4-201ENST00000372856 FAM160A1Q05DH4 1040 aa18.43■□□□□ 0.54
PABPC4-201ENST00000372856 CEP135Q66GS9 1140 aa18.43■□□□□ 0.54
PABPC4-201ENST00000372856 DHX40Q8IX18 779 aaKnown RBP18.43■□□□□ 0.54
PABPC4-201ENST00000372856 IFNL2Q8IZJ0 200 aa18.43■□□□□ 0.54
PABPC4-201ENST00000372856 AOPEPQ8N6M6 819 aa18.43■□□□□ 0.54
PABPC4-201ENST00000372856 FMNL2Q96PY5 1086 aa18.43■□□□□ 0.54
PABPC4-201ENST00000372856 ZNF215Q9UL58 517 aaPredicted RBP18.43■□□□□ 0.54
PABPC4-201ENST00000372856 PHRF1Q9P1Y6 1649 aaKnown RBP18.43■□□□□ 0.54
PABPC4-201ENST00000372856 ELF2Q15723 593 aa18.43■□□□□ 0.54
PABPC4-201ENST00000372856 ATG9AQ7Z3C6 839 aa18.43■□□□□ 0.54
PABPC4-201ENST00000372856 ZNF594Q96JF6 807 aaPredicted RBP18.43■□□□□ 0.54
PABPC4-201ENST00000372856 TOMM22Q9NS69 142 aa18.43■□□□□ 0.54
PABPC4-201ENST00000372856 BRD2P25440 801 aaKnown RBP18.42■□□□□ 0.54
PABPC4-201ENST00000372856 DSCC1Q9BVC3 393 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms