RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 SF3B3Q15393 1217 aaKnown RBP29.88■■■□□ 2.37
CTSA-203ENST00000372459 CCDC102BQ68D86 513 aa29.88■■■□□ 2.37
CTSA-203ENST00000372459 ARID4AP29374 1257 aaPredicted RBP29.87■■■□□ 2.37
CTSA-203ENST00000372459 SLFNL1Q499Z3 407 aa29.87■■■□□ 2.37
CTSA-203ENST00000372459 C4BP0C0L5 1744 aa29.87■■■□□ 2.37
CTSA-203ENST00000372459 MAST3O60307 1309 aa29.87■■■□□ 2.37
CTSA-203ENST00000372459 TTF1Q15361 905 aaPredicted RBP29.86■■■□□ 2.37
CTSA-203ENST00000372459 SLC10A5Q5PT55 438 aa29.86■■■□□ 2.37
CTSA-203ENST00000372459 BLOC1S2Q6QNY1 142 aa29.86■■■□□ 2.37
CTSA-203ENST00000372459 AKAP11Q9UKA4 1901 aa29.86■■■□□ 2.37
CTSA-203ENST00000372459 ARHGEF1Q92888 912 aaKnown RBP29.86■■■□□ 2.37
CTSA-203ENST00000372459 PI16Q6UXB8 463 aa29.85■■■□□ 2.37
CTSA-203ENST00000372459 ZSCAN31Q96LW9 406 aaPredicted RBP29.85■■■□□ 2.37
CTSA-203ENST00000372459 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.85■■■□□ 2.373e-6■■□□□ 12.8
CTSA-203ENST00000372459 PHKA1P46020 1223 aa29.84■■■□□ 2.37
CTSA-203ENST00000372459 COL24A1Q17RW2 1714 aa29.84■■■□□ 2.37
CTSA-203ENST00000372459 PTMSP20962 102 aa29.84■■■□□ 2.37
CTSA-203ENST00000372459 PKP1Q13835 747 aa29.84■■■□□ 2.37
CTSA-203ENST00000372459 ZSCAN25Q6NSZ9 544 aa29.83■■■□□ 2.37
CTSA-203ENST00000372459 FAM196AQ6ZSG2 479 aa29.83■■■□□ 2.37
CTSA-203ENST00000372459 ANKRD18AQ8IVF6 992 aa29.83■■■□□ 2.37
CTSA-203ENST00000372459 OSBP2Q969R2 916 aa29.83■■■□□ 2.37
CTSA-203ENST00000372459 RPS6KB1P23443 525 aa29.83■■■□□ 2.37
CTSA-203ENST00000372459 WASHC4Q2M389 1173 aa29.83■■■□□ 2.37
CTSA-203ENST00000372459 TRAPPC3LQ5T215 181 aa29.83■■■□□ 2.37
CTSA-203ENST00000372459 NBPF5PQ86XG9 351 aaPredicted RBP29.83■■■□□ 2.37
CTSA-203ENST00000372459 APPBP2Q92624 585 aa29.83■■■□□ 2.37
CTSA-203ENST00000372459 SH2B1Q9NRF2 756 aaPredicted RBP29.83■■■□□ 2.37
CTSA-203ENST00000372459 TAF6LQ9Y6J9 622 aa29.83■■■□□ 2.37
CTSA-203ENST00000372459 MYH7P12883 1935 aa29.82■■■□□ 2.36
CTSA-203ENST00000372459 M0R2C6 588 aa29.82■■■□□ 2.36
CTSA-203ENST00000372459 HSPD1P10809 573 aaKnown RBP29.82■■■□□ 2.36
CTSA-203ENST00000372459 RFC4P35249 363 aa29.82■■■□□ 2.36
CTSA-203ENST00000372459 ANKRD1Q15327 319 aa29.82■■■□□ 2.36
CTSA-203ENST00000372459 AMIGO3Q86WK7 504 aa29.82■■■□□ 2.36
CTSA-203ENST00000372459 ALDH8A1Q9H2A2 487 aaPredicted RBP29.82■■■□□ 2.36
CTSA-203ENST00000372459 CYP21A2P08686 494 aa29.81■■■□□ 2.36
CTSA-203ENST00000372459 CHRNDQ07001 517 aa29.81■■■□□ 2.36
CTSA-203ENST00000372459 C3orf67Q6ZVT6 689 aa29.81■■■□□ 2.36
CTSA-203ENST00000372459 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.81■■■□□ 2.36
CTSA-203ENST00000372459 GOLGA6L22H0YM25 854 aa29.81■■■□□ 2.36
CTSA-203ENST00000372459 KRT27Q7Z3Y8 459 aa29.81■■■□□ 2.36
CTSA-203ENST00000372459 LARP6Q9BRS8 491 aaKnown RBP29.81■■■□□ 2.36
CTSA-203ENST00000372459 BAG4O95429 457 aaKnown RBP29.8■■■□□ 2.36
CTSA-203ENST00000372459 TPTE2Q6XPS3 522 aa29.8■■■□□ 2.36
CTSA-203ENST00000372459 CASZ1Q86V15 1759 aa29.8■■■□□ 2.36
CTSA-203ENST00000372459 NEK1Q96PY6 1258 aa29.79■■■□□ 2.36
CTSA-203ENST00000372459 ZDHHC9Q9Y397 364 aa29.79■■■□□ 2.36
CTSA-203ENST00000372459 C4AP0C0L4 1744 aa29.79■■■□□ 2.36
CTSA-203ENST00000372459 TRAK2O60296 914 aa29.79■■■□□ 2.36
CTSA-203ENST00000372459 PHF14O94880 888 aa29.79■■■□□ 2.36
CTSA-203ENST00000372459 NLRP3Q96P20 1036 aa29.79■■■□□ 2.36
CTSA-203ENST00000372459 LRRC4BQ9NT99 713 aa29.79■■■□□ 2.36
CTSA-203ENST00000372459 BSDC1Q9NW68 430 aaPredicted RBP29.78■■■□□ 2.36
CTSA-203ENST00000372459 ADRA2BP18089 450 aa29.77■■■□□ 2.36
CTSA-203ENST00000372459 SNAP23O00161 211 aa29.77■■■□□ 2.36
CTSA-203ENST00000372459 LARGE1O95461 756 aa29.77■■■□□ 2.36
CTSA-203ENST00000372459 ADD2P35612 726 aa29.77■■■□□ 2.36
CTSA-203ENST00000372459 SPATA5Q8NB90 893 aa29.77■■■□□ 2.36
CTSA-203ENST00000372459 PIH1D3Q9NQM4 214 aaKnown RBP29.77■■■□□ 2.36
CTSA-203ENST00000372459 BRWD3Q6RI45 1802 aa29.76■■■□□ 2.36
CTSA-203ENST00000372459 COL4A1P02462 1669 aa29.76■■■□□ 2.35
CTSA-203ENST00000372459 BRD1O95696 1058 aa29.75■■■□□ 2.35
CTSA-203ENST00000372459 SLC27A3Q5K4L6 730 aa29.75■■■□□ 2.35
CTSA-203ENST00000372459 HMGB1P09429 215 aaKnown RBP29.75■■■□□ 2.35
CTSA-203ENST00000372459 SLC9C2Q5TAH2 1124 aa29.75■■■□□ 2.35
CTSA-203ENST00000372459 PUS7LQ9H0K6 701 aaKnown RBP29.75■■■□□ 2.35
CTSA-203ENST00000372459 BRPF3Q9ULD4 1205 aa29.75■■■□□ 2.35
CTSA-203ENST00000372459 IDH1O75874 414 aaKnown RBP29.74■■■□□ 2.35
CTSA-203ENST00000372459 COL9A3Q14050 684 aaPredicted RBP29.74■■■□□ 2.35
CTSA-203ENST00000372459 UBE3CQ15386 1083 aa29.74■■■□□ 2.35
CTSA-203ENST00000372459 CTNNA3Q9UI47 895 aa29.74■■■□□ 2.35
CTSA-203ENST00000372459 TPCN1Q9ULQ1 816 aa29.74■■■□□ 2.35
CTSA-203ENST00000372459 RASGRF1Q13972 1273 aa29.73■■■□□ 2.35
CTSA-203ENST00000372459 ME3Q16798 604 aa29.73■■■□□ 2.35
CTSA-203ENST00000372459 CCDC83Q8IWF9 413 aa29.73■■■□□ 2.35
CTSA-203ENST00000372459 SMC3Q9UQE7 1217 aa29.73■■■□□ 2.35
CTSA-203ENST00000372459 TCEANC2Q96MN5 208 aa29.73■■■□□ 2.35
CTSA-203ENST00000372459 TOB2Q14106 344 aaPredicted RBP29.72■■■□□ 2.35
CTSA-203ENST00000372459 SKOR2Q2VWA4 1001 aaPredicted RBP29.72■■■□□ 2.35
CTSA-203ENST00000372459 GPAA1O43292 621 aa29.72■■■□□ 2.35
CTSA-203ENST00000372459 BCAMP50895 628 aa29.72■■■□□ 2.35
CTSA-203ENST00000372459 UBE4AQ14139 1066 aa29.72■■■□□ 2.35
CTSA-203ENST00000372459 CELF1Q92879 486 aaKnown RBP29.72■■■□□ 2.35
CTSA-203ENST00000372459 CARMIL3Q8ND23 1372 aa29.72■■■□□ 2.35
CTSA-203ENST00000372459 A0A1B0GUL6 1792 aa29.71■■■□□ 2.35
CTSA-203ENST00000372459 NPHP1O15259 732 aa29.71■■■□□ 2.35
CTSA-203ENST00000372459 TRIM37O94972 964 aa29.71■■■□□ 2.35
CTSA-203ENST00000372459 MINPP1Q9UNW1 487 aa29.71■■■□□ 2.35
CTSA-203ENST00000372459 STOX1Q6ZVD7 989 aa29.7■■■□□ 2.35
CTSA-203ENST00000372459 TAF1P21675 1872 aa29.7■■■□□ 2.35
CTSA-203ENST00000372459 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.7■■■□□ 2.34
CTSA-203ENST00000372459 PDE6AP16499 860 aa29.7■■■□□ 2.34
CTSA-203ENST00000372459 WDR33Q9C0J8 1336 aaKnown RBP29.69■■■□□ 2.34
CTSA-203ENST00000372459 RPS8P62241 208 aaKnown RBP29.69■■■□□ 2.34
CTSA-203ENST00000372459 MAP3K12Q12852 859 aa29.69■■■□□ 2.34
CTSA-203ENST00000372459 MCTP1Q6DN14 999 aa29.69■■■□□ 2.34
CTSA-203ENST00000372459 UBR3Q6ZT12 1888 aa29.69■■■□□ 2.34
CTSA-203ENST00000372459 MYO5AQ9Y4I1 1855 aaKnown RBP29.69■■■□□ 2.34
CTSA-203ENST00000372459 ZNF532Q9HCE3 1301 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms