RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 KIF13BQ9NQT8 1826 aa13.38□□□□□ -0.27
BRCC3-204ENST00000369462 GLRX3O76003 335 aaKnown RBP13.38□□□□□ -0.27
BRCC3-204ENST00000369462 GSPT1P15170 499 aaKnown RBP13.38□□□□□ -0.27
BRCC3-204ENST00000369462 BOLA2Q9H3K6 86 aa13.38□□□□□ -0.27
BRCC3-204ENST00000369462 LEMD3Q9Y2U8 911 aa13.38□□□□□ -0.27
BRCC3-204ENST00000369462 SLX4Q8IY92 1834 aa13.38□□□□□ -0.27
BRCC3-204ENST00000369462 UTRNP46939 3433 aa13.37□□□□□ -0.27
BRCC3-204ENST00000369462 C21orf2O43822 256 aa13.37□□□□□ -0.27
BRCC3-204ENST00000369462 UFL1O94874 794 aa13.37□□□□□ -0.27
BRCC3-204ENST00000369462 C7orf43Q8WVR3 580 aa13.37□□□□□ -0.27
BRCC3-204ENST00000369462 FOXD4L1Q9NU39 408 aa13.37□□□□□ -0.27
BRCC3-204ENST00000369462 PODXL2Q9NZ53 605 aa13.37□□□□□ -0.27
BRCC3-204ENST00000369462 GGA1Q9UJY5 639 aa13.37□□□□□ -0.27
BRCC3-204ENST00000369462 AOX1Q06278 1338 aa13.37□□□□□ -0.27
BRCC3-204ENST00000369462 KLRK1P26718 216 aa13.37□□□□□ -0.27
BRCC3-204ENST00000369462 BCAMP50895 628 aa13.37□□□□□ -0.27
BRCC3-204ENST00000369462 CCDC102BQ68D86 513 aa13.37□□□□□ -0.27
BRCC3-204ENST00000369462 MPNDQ8N594 471 aa13.37□□□□□ -0.27
BRCC3-204ENST00000369462 NLGN2Q8NFZ4 835 aa13.37□□□□□ -0.27
BRCC3-204ENST00000369462 POLLQ9UGP5 575 aa13.37□□□□□ -0.27
BRCC3-204ENST00000369462 C6orf229H3BNL8 230 aa13.36□□□□□ -0.27
BRCC3-204ENST00000369462 MAP4K4O95819 1239 aaPredicted RBP13.36□□□□□ -0.27
BRCC3-204ENST00000369462 ATP5JP18859 108 aa13.36□□□□□ -0.27
BRCC3-204ENST00000369462 ATP2B4P23634 1241 aa13.36□□□□□ -0.27
BRCC3-204ENST00000369462 PHKA1P46020 1223 aa13.36□□□□□ -0.27
BRCC3-204ENST00000369462 GYG1P46976 350 aa13.36□□□□□ -0.27
BRCC3-204ENST00000369462 BMP2KLQ5H9B9 411 aa13.36□□□□□ -0.27
BRCC3-204ENST00000369462 TTC39AQ5SRH9 613 aa13.36□□□□□ -0.27
BRCC3-204ENST00000369462 DPP8Q6V1X1 898 aaPredicted RBP13.36□□□□□ -0.27
BRCC3-204ENST00000369462 GPR101Q96P66 508 aaPredicted RBP13.36□□□□□ -0.27
BRCC3-204ENST00000369462 FHDC1Q9C0D6 1143 aaPredicted RBP13.36□□□□□ -0.27
BRCC3-204ENST00000369462 CACNA1SQ13698 1873 aa13.36□□□□□ -0.27
BRCC3-204ENST00000369462 TXNRD3Q86VQ6 643 aa13.36□□□□□ -0.27
BRCC3-204ENST00000369462 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
BRCC3-204ENST00000369462 TBC1D16Q8TBP0 767 aa13.36□□□□□ -0.27
BRCC3-204ENST00000369462 TRIM6-TRIM34B2RNG4 842 aa13.35□□□□□ -0.27
BRCC3-204ENST00000369462 CAVIN4Q5BKX8 364 aa13.35□□□□□ -0.27
BRCC3-204ENST00000369462 DALRD3Q5D0E6 543 aaKnown RBP13.35□□□□□ -0.27
BRCC3-204ENST00000369462 VPS37DQ86XT2 251 aa13.35□□□□□ -0.27
BRCC3-204ENST00000369462 NDUFB9Q9Y6M9 179 aa13.35□□□□□ -0.27
BRCC3-204ENST00000369462 FAM84BQ96KN1 310 aaPredicted RBP13.35□□□□□ -0.27
BRCC3-204ENST00000369462 SDSP20132 328 aa13.35□□□□□ -0.27
BRCC3-204ENST00000369462 RILPL2Q969X0 211 aa13.35□□□□□ -0.27
BRCC3-204ENST00000369462 A0A1B0GUL6 1792 aa13.34□□□□□ -0.27
BRCC3-204ENST00000369462 SCARF1Q14162 830 aa13.34□□□□□ -0.27
BRCC3-204ENST00000369462 CC2D2BQ6DHV5 1058 aa13.34□□□□□ -0.27
BRCC3-204ENST00000369462 DNAJC2Q99543 621 aaKnown RBP13.34□□□□□ -0.27
BRCC3-204ENST00000369462 SNRKQ9NRH2 765 aa13.34□□□□□ -0.27
BRCC3-204ENST00000369462 IQSEC3Q9UPP2 1182 aaPredicted RBP13.34□□□□□ -0.27
BRCC3-204ENST00000369462 DLEC1Q9Y238 1755 aa13.34□□□□□ -0.27
BRCC3-204ENST00000369462 LRRC37AA6NMS7 1700 aa13.34□□□□□ -0.27
BRCC3-204ENST00000369462 BCS1LQ9Y276 419 aa13.34□□□□□ -0.27
BRCC3-204ENST00000369462 KIAA1551Q9HCM1 1747 aa13.33□□□□□ -0.27
BRCC3-204ENST00000369462 HIBADHP31937 336 aaKnown RBP13.33□□□□□ -0.28
BRCC3-204ENST00000369462 FKBP4Q02790 459 aaKnown RBP eCLIP13.33□□□□□ -0.28
BRCC3-204ENST00000369462 PI16Q6UXB8 463 aa13.33□□□□□ -0.28
BRCC3-204ENST00000369462 FBXO33Q7Z6M2 555 aa13.33□□□□□ -0.28
BRCC3-204ENST00000369462 EDC3Q96F86 508 aaKnown RBP13.33□□□□□ -0.28
BRCC3-204ENST00000369462 HAUS7Q99871 368 aa13.33□□□□□ -0.28
BRCC3-204ENST00000369462 IRS2Q9Y4H2 1338 aa13.33□□□□□ -0.28
BRCC3-204ENST00000369462 UQCRFS1P1P0C7P4 283 aa13.33□□□□□ -0.28
BRCC3-204ENST00000369462 MCAMP43121 646 aa13.33□□□□□ -0.28
BRCC3-204ENST00000369462 RIMBP2O15034 1052 aa13.32□□□□□ -0.28
BRCC3-204ENST00000369462 ARID4AP29374 1257 aaPredicted RBP13.32□□□□□ -0.28
BRCC3-204ENST00000369462 CCDC93Q567U6 631 aa13.32□□□□□ -0.28
BRCC3-204ENST00000369462 ZNF512BQ96KM6 892 aaPredicted RBP13.32□□□□□ -0.28
BRCC3-204ENST00000369462 SYT17Q9BSW7 474 aa13.32□□□□□ -0.28
BRCC3-204ENST00000369462 ZC3H12CQ9C0D7 883 aaKnown RBP13.32□□□□□ -0.28
BRCC3-204ENST00000369462 GNL3LQ9NVN8 582 aaKnown RBP13.32□□□□□ -0.28
BRCC3-204ENST00000369462 FRAT2O75474 233 aaPredicted RBP13.32□□□□□ -0.28
BRCC3-204ENST00000369462 RASGRF1Q13972 1273 aa13.32□□□□□ -0.28
BRCC3-204ENST00000369462 WASHC4Q2M389 1173 aa13.32□□□□□ -0.28
BRCC3-204ENST00000369462 C15orf52Q6ZUT6 534 aaKnown RBP13.32□□□□□ -0.28
BRCC3-204ENST00000369462 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.32□□□□□ -0.28
BRCC3-204ENST00000369462 GOLIM4O00461 696 aa13.31□□□□□ -0.28
BRCC3-204ENST00000369462 RTKN2Q8IZC4 609 aa13.31□□□□□ -0.28
BRCC3-204ENST00000369462 CNTROBQ8N137 903 aa13.31□□□□□ -0.28
BRCC3-204ENST00000369462 ZAP70P43403 619 aa13.31□□□□□ -0.28
BRCC3-204ENST00000369462 ZNF804AQ7Z570 1209 aa13.31□□□□□ -0.28
BRCC3-204ENST00000369462 HMG20BQ9P0W2 317 aa13.31□□□□□ -0.28
BRCC3-204ENST00000369462 ARAP2Q8WZ64 1704 aa13.31□□□□□ -0.28
BRCC3-204ENST00000369462 SOGA3Q5TF21 947 aa13.31□□□□□ -0.28
BRCC3-204ENST00000369462 SPATA5Q8NB90 893 aa13.31□□□□□ -0.28
BRCC3-204ENST00000369462 EVI5LQ96CN4 794 aa13.31□□□□□ -0.28
BRCC3-204ENST00000369462 EYA3Q99504 573 aa13.31□□□□□ -0.28
BRCC3-204ENST00000369462 ANTXR1Q9H6X2 564 aa13.31□□□□□ -0.28
BRCC3-204ENST00000369462 PAG1Q9NWQ8 432 aa13.31□□□□□ -0.28
BRCC3-204ENST00000369462 MED23Q9ULK4 1368 aa13.3□□□□□ -0.28
BRCC3-204ENST00000369462 LTBP1Q14766 1721 aa13.3□□□□□ -0.28
BRCC3-204ENST00000369462 DUOX1Q9NRD9 1551 aa13.3□□□□□ -0.28
BRCC3-204ENST00000369462 GRIPAP1Q4V328 841 aa13.3□□□□□ -0.28
BRCC3-204ENST00000369462 RTFDC1Q9BY42 306 aaPredicted RBP13.3□□□□□ -0.28
BRCC3-204ENST00000369462 SNED1Q8TER0 1413 aa13.3□□□□□ -0.28
BRCC3-204ENST00000369462 CD209Q9NNX6 404 aa13.29□□□□□ -0.28
BRCC3-204ENST00000369462 CYP2E1P05181 493 aaPredicted RBP13.29□□□□□ -0.28
BRCC3-204ENST00000369462 DOK7Q18PE1 504 aa13.29□□□□□ -0.28
BRCC3-204ENST00000369462 C8orf34Q49A92 452 aa13.29□□□□□ -0.28
BRCC3-204ENST00000369462 SUPT20HQ8NEM7 779 aa13.29□□□□□ -0.28
BRCC3-204ENST00000369462 FSD1Q9BTV5 496 aa13.29□□□□□ -0.28
BRCC3-204ENST00000369462 DENND2AQ9ULE3 1009 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms