RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 ZNF165P49910 485 aa17.95■□□□□ 0.46
PTBP1-203ENST00000356948 CLSTN2Q9H4D0 955 aa17.95■□□□□ 0.46
PTBP1-203ENST00000356948 CGNQ9P2M7 1197 aaKnown RBP17.95■□□□□ 0.46
PTBP1-203ENST00000356948 U3KPZ7 1027 aaPredicted RBP17.95■□□□□ 0.46
PTBP1-203ENST00000356948 POLR3DP05423 398 aaPredicted RBP17.95■□□□□ 0.46
PTBP1-203ENST00000356948 RXRAP19793 462 aa17.95■□□□□ 0.46
PTBP1-203ENST00000356948 INCENPQ9NQS7 918 aa17.95■□□□□ 0.46
PTBP1-203ENST00000356948 MRC1P22897 1456 aa17.95■□□□□ 0.46
PTBP1-203ENST00000356948 ELP1O95163 1332 aa17.95■□□□□ 0.46
PTBP1-203ENST00000356948 FDPSP14324 419 aaKnown RBP17.94■□□□□ 0.46
PTBP1-203ENST00000356948 DHX32Q7L7V1 743 aaKnown RBP17.94■□□□□ 0.46
PTBP1-203ENST00000356948 CWC25Q9NXE8 425 aaPredicted RBP17.94■□□□□ 0.46
PTBP1-203ENST00000356948 UBE2Q2LH0YL09 131 aa17.94■□□□□ 0.46
PTBP1-203ENST00000356948 SNAP23O00161 211 aa17.94■□□□□ 0.46
PTBP1-203ENST00000356948 CCAR1Q8IX12 1150 aaKnown RBP17.94■□□□□ 0.46
PTBP1-203ENST00000356948 MYRIPQ8NFW9 859 aa17.94■□□□□ 0.46
PTBP1-203ENST00000356948 C16orf45Q96MC5 204 aaPredicted RBP17.94■□□□□ 0.46
PTBP1-203ENST00000356948 PUS7LQ9H0K6 701 aaKnown RBP17.94■□□□□ 0.46
PTBP1-203ENST00000356948 GPTP24298 496 aa17.93■□□□□ 0.46
PTBP1-203ENST00000356948 PDIA3P30101 505 aaKnown RBP17.93■□□□□ 0.46
PTBP1-203ENST00000356948 PPP4R3BQ5MIZ7 849 aa17.93■□□□□ 0.46
PTBP1-203ENST00000356948 EXOSC10Q01780 885 aaKnown RBP17.93■□□□□ 0.46
PTBP1-203ENST00000356948 WASHC4Q2M389 1173 aa17.93■□□□□ 0.46
PTBP1-203ENST00000356948 ADAMTS7Q9UKP4 1686 aa17.93■□□□□ 0.46
PTBP1-203ENST00000356948 CAMTA1Q9Y6Y1 1673 aa17.93■□□□□ 0.46
PTBP1-203ENST00000356948 TERF1P54274 439 aa17.92■□□□□ 0.46
PTBP1-203ENST00000356948 AIFM3Q96NN9 605 aa17.92■□□□□ 0.46
PTBP1-203ENST00000356948 ARFGEF2Q9Y6D5 1785 aa17.92■□□□□ 0.46
PTBP1-203ENST00000356948 RIOK3O14730 519 aaKnown RBP17.92■□□□□ 0.46
PTBP1-203ENST00000356948 ZMYM1Q5SVZ6 1142 aa17.92■□□□□ 0.46
PTBP1-203ENST00000356948 ISM2Q6H9L7 571 aa17.92■□□□□ 0.46
PTBP1-203ENST00000356948 SMARCC2Q8TAQ2 1214 aa17.92■□□□□ 0.46
PTBP1-203ENST00000356948 SPTLC3Q9NUV7 552 aa17.92■□□□□ 0.46
PTBP1-203ENST00000356948 PFKFB2O60825 505 aa17.92■□□□□ 0.46
PTBP1-203ENST00000356948 SNW1Q13573 536 aaKnown RBP17.92■□□□□ 0.46
PTBP1-203ENST00000356948 CACTINQ8WUQ7 758 aaKnown RBP17.92■□□□□ 0.46
PTBP1-203ENST00000356948 ALDH8A1Q9H2A2 487 aaPredicted RBP17.92■□□□□ 0.46
PTBP1-203ENST00000356948 MST1RQ04912 1400 aa17.91■□□□□ 0.46
PTBP1-203ENST00000356948 A0A1B0GVL5 298 aa17.91■□□□□ 0.46
PTBP1-203ENST00000356948 EYA2O00167 538 aa17.91■□□□□ 0.46
PTBP1-203ENST00000356948 DYNC1I1O14576 645 aa17.91■□□□□ 0.46
PTBP1-203ENST00000356948 KRT32Q14532 448 aa17.91■□□□□ 0.46
PTBP1-203ENST00000356948 SYTL4Q96C24 671 aaPredicted RBP17.91■□□□□ 0.46
PTBP1-203ENST00000356948 ZAP70P43403 619 aa17.91■□□□□ 0.46
PTBP1-203ENST00000356948 PTPN21Q16825 1174 aa17.91■□□□□ 0.46
PTBP1-203ENST00000356948 SENP2Q9HC62 589 aa17.91■□□□□ 0.46
PTBP1-203ENST00000356948 USP27XA6NNY8 438 aa17.91■□□□□ 0.46
PTBP1-203ENST00000356948 ASAP1Q9ULH1 1129 aa17.91■□□□□ 0.46
PTBP1-203ENST00000356948 ZNF75DP51815 510 aa17.9■□□□□ 0.46
PTBP1-203ENST00000356948 PRDM11Q9NQV5 511 aa17.9■□□□□ 0.46
PTBP1-203ENST00000356948 LAMA4Q16363 1823 aa17.9■□□□□ 0.46
PTBP1-203ENST00000356948 KAT6BQ8WYB5 2073 aa17.9■□□□□ 0.46
PTBP1-203ENST00000356948 CHAF1AQ13111 956 aaPredicted RBP17.9■□□□□ 0.46
PTBP1-203ENST00000356948 ZCRB1Q8TBF4 217 aaKnown RBP17.9■□□□□ 0.46
PTBP1-203ENST00000356948 XAGE2Q96GT9 111 aa17.9■□□□□ 0.46
PTBP1-203ENST00000356948 CLIC4Q9Y696 253 aa17.9■□□□□ 0.46
PTBP1-203ENST00000356948 ME1P48163 572 aa17.9■□□□□ 0.46
PTBP1-203ENST00000356948 STK11IPQ8N1F8 1099 aa17.9■□□□□ 0.46
PTBP1-203ENST00000356948 SH3TC1Q8TE82 1336 aa17.89■□□□□ 0.46
PTBP1-203ENST00000356948 MTERF4Q7Z6M4 381 aaKnown RBP17.89■□□□□ 0.45
PTBP1-203ENST00000356948 BCL2L12Q9HB09 334 aa17.89■□□□□ 0.45
PTBP1-203ENST00000356948 GLI3P10071 1580 aa17.89■□□□□ 0.45
PTBP1-203ENST00000356948 RNF113AO15541 343 aaKnown RBP17.89■□□□□ 0.45
PTBP1-203ENST00000356948 FGAP02671 866 aa17.89■□□□□ 0.45
PTBP1-203ENST00000356948 HLFQ16534 295 aa17.89■□□□□ 0.45
PTBP1-203ENST00000356948 ALS2Q96Q42 1657 aa17.89■□□□□ 0.45
PTBP1-203ENST00000356948 BIN1O00499 593 aa17.89■□□□□ 0.45
PTBP1-203ENST00000356948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.89■□□□□ 0.45
PTBP1-203ENST00000356948 GORABQ5T7V8 394 aa17.88■□□□□ 0.45
PTBP1-203ENST00000356948 ZSCAN25Q6NSZ9 544 aa17.88■□□□□ 0.45
PTBP1-203ENST00000356948 RBM43Q6ZSC3 357 aaKnown RBP17.88■□□□□ 0.45
PTBP1-203ENST00000356948 PLA2G4DQ86XP0 818 aa17.88■□□□□ 0.45
PTBP1-203ENST00000356948 TRERF1Q96PN7 1200 aa17.88■□□□□ 0.45
PTBP1-203ENST00000356948 DDX19AQ9NUU7 478 aaKnown RBP17.88■□□□□ 0.45
PTBP1-203ENST00000356948 COL18A1P39060 1754 aa17.88■□□□□ 0.45
PTBP1-203ENST00000356948 IQCB1Q15051 598 aa17.88■□□□□ 0.45
PTBP1-203ENST00000356948 CLIP2Q9UDT6 1046 aa17.88■□□□□ 0.45
PTBP1-203ENST00000356948 FILIP1Q7Z7B0 1213 aa17.88■□□□□ 0.45
PTBP1-203ENST00000356948 HELBQ8NG08 1087 aaPredicted RBP17.88■□□□□ 0.45
PTBP1-203ENST00000356948 KIF28PB7ZC32 967 aa17.87■□□□□ 0.45
PTBP1-203ENST00000356948 IL15P40933 162 aaPredicted RBP17.87■□□□□ 0.45
PTBP1-203ENST00000356948 DNAJC10Q8IXB1 793 aa17.87■□□□□ 0.45
PTBP1-203ENST00000356948 SMAP1Q8IYB5 467 aaPredicted RBP17.87■□□□□ 0.45
PTBP1-203ENST00000356948 FSIP1Q8NA03 581 aa17.87■□□□□ 0.45
PTBP1-203ENST00000356948 PCDHA7Q9UN72 937 aa17.87■□□□□ 0.45
PTBP1-203ENST00000356948 ANTXR2P58335 489 aa17.87■□□□□ 0.45
PTBP1-203ENST00000356948 SPATA31A3Q5VYP0 1347 aa17.86■□□□□ 0.45
PTBP1-203ENST00000356948 CARMIL3Q8ND23 1372 aa17.86■□□□□ 0.45
PTBP1-203ENST00000356948 NDUFA8P51970 172 aa17.86■□□□□ 0.45
PTBP1-203ENST00000356948 MYL10Q9BUA6 226 aa17.86■□□□□ 0.45
PTBP1-203ENST00000356948 HELLSQ9NRZ9 838 aa17.86■□□□□ 0.45
PTBP1-203ENST00000356948 CEP126Q9P2H0 1117 aa17.86■□□□□ 0.45
PTBP1-203ENST00000356948 SALL1Q9NSC2 1324 aa17.86■□□□□ 0.45
PTBP1-203ENST00000356948 ATP2B3Q16720 1220 aa17.85■□□□□ 0.45
PTBP1-203ENST00000356948 CCDC57Q2TAC2 916 aa17.85■□□□□ 0.45
PTBP1-203ENST00000356948 TTC39AQ5SRH9 613 aa17.85■□□□□ 0.45
PTBP1-203ENST00000356948 ZNF592Q92610 1267 aa17.85■□□□□ 0.45
PTBP1-203ENST00000356948 DSCC1Q9BVC3 393 aa17.85■□□□□ 0.45
PTBP1-203ENST00000356948 RCOR1Q9UKL0 485 aa17.85■□□□□ 0.45
PTBP1-203ENST00000356948 HPS5Q9UPZ3 1129 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms