RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 MTERF4Q7Z6M4 381 aaKnown RBP20.79■□□□□ 0.92
GYPC-202ENST00000356887 HSPD1P10809 573 aaKnown RBP20.79■□□□□ 0.92
GYPC-202ENST00000356887 GTF2F1P35269 517 aaKnown RBP eCLIP20.79■□□□□ 0.921e-6■■■■□ 23.1
GYPC-202ENST00000356887 PIP4K2BP78356 416 aa20.79■□□□□ 0.92
GYPC-202ENST00000356887 LRRC24Q50LG9 513 aa20.79■□□□□ 0.92
GYPC-202ENST00000356887 CCDC191Q8NCU4 936 aa20.79■□□□□ 0.92
GYPC-202ENST00000356887 RCOR1Q9UKL0 485 aa20.79■□□□□ 0.92
GYPC-202ENST00000356887 E7EWF7 191 aa20.78■□□□□ 0.92
GYPC-202ENST00000356887 RNF113AO15541 343 aaKnown RBP20.78■□□□□ 0.92
GYPC-202ENST00000356887 CIAO1O76071 339 aa20.78■□□□□ 0.92
GYPC-202ENST00000356887 ATG3Q9NT62 314 aa20.78■□□□□ 0.92
GYPC-202ENST00000356887 A0A0G2JLW4 131 aa20.77■□□□□ 0.92
GYPC-202ENST00000356887 PTPDC1A2A3K4 754 aa20.77■□□□□ 0.92
GYPC-202ENST00000356887 A1BGP04217 495 aa20.77■□□□□ 0.92
GYPC-202ENST00000356887 IFIT1P09914 478 aaKnown RBP20.77■□□□□ 0.92
GYPC-202ENST00000356887 PLA2G4DQ86XP0 818 aa20.77■□□□□ 0.92
GYPC-202ENST00000356887 ZNF594Q96JF6 807 aaPredicted RBP20.77■□□□□ 0.92
GYPC-202ENST00000356887 PRDM4Q9UKN5 801 aa20.77■□□□□ 0.92
GYPC-202ENST00000356887 COL16A1Q07092 1604 aaPredicted RBP20.77■□□□□ 0.92
GYPC-202ENST00000356887 ERVV-2B6SEH9 535 aa20.77■□□□□ 0.92
GYPC-202ENST00000356887 ZNF75DP51815 510 aa20.77■□□□□ 0.92
GYPC-202ENST00000356887 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.77■□□□□ 0.92
GYPC-202ENST00000356887 UBR2Q8IWV8 1755 aa20.77■□□□□ 0.91
GYPC-202ENST00000356887 MAST3O60307 1309 aa20.77■□□□□ 0.91
GYPC-202ENST00000356887 MYH15Q9Y2K3 1946 aa20.76■□□□□ 0.91
GYPC-202ENST00000356887 CAVIN2O95810 425 aa20.76■□□□□ 0.91
GYPC-202ENST00000356887 PTGS1P23219 599 aa20.76■□□□□ 0.91
GYPC-202ENST00000356887 CERKQ8TCT0 537 aa20.76■□□□□ 0.91
GYPC-202ENST00000356887 ZNF274Q96GC6 653 aaPredicted RBP20.76■□□□□ 0.91
GYPC-202ENST00000356887 KIF3AQ9Y496 699 aa20.76■□□□□ 0.91
GYPC-202ENST00000356887 SALL1Q9NSC2 1324 aa20.76■□□□□ 0.91
GYPC-202ENST00000356887 A0A1B0GUL7 405 aa20.76■□□□□ 0.91
GYPC-202ENST00000356887 ZNF165P49910 485 aa20.76■□□□□ 0.91
GYPC-202ENST00000356887 ZCRB1Q8TBF4 217 aaKnown RBP20.76■□□□□ 0.91
GYPC-202ENST00000356887 DNAJC25Q9H1X3 360 aa20.76■□□□□ 0.91
GYPC-202ENST00000356887 SPEF2Q9C093 1822 aa20.76■□□□□ 0.91
GYPC-202ENST00000356887 PCDH11XQ9BZA7 1347 aa20.75■□□□□ 0.91
GYPC-202ENST00000356887 PCDH11YQ9BZA8 1340 aa20.75■□□□□ 0.91
GYPC-202ENST00000356887 UBAP1LF5GYI3 381 aa20.75■□□□□ 0.91
GYPC-202ENST00000356887 CCT2P78371 535 aaKnown RBP20.75■□□□□ 0.91
GYPC-202ENST00000356887 ATL3Q6DD88 541 aa20.75■□□□□ 0.91
GYPC-202ENST00000356887 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.75■□□□□ 0.91
GYPC-202ENST00000356887 ZBTB3Q9H5J0 574 aa20.75■□□□□ 0.91
GYPC-202ENST00000356887 PRDM11Q9NQV5 511 aa20.75■□□□□ 0.91
GYPC-202ENST00000356887 COL22A1Q8NFW1 1626 aaPredicted RBP20.75■□□□□ 0.91
GYPC-202ENST00000356887 KCPQ6ZWJ8 1503 aa20.75■□□□□ 0.91
GYPC-202ENST00000356887 PDIA3P30101 505 aaKnown RBP20.74■□□□□ 0.91
GYPC-202ENST00000356887 PUS3Q9BZE2 481 aaKnown RBP20.74■□□□□ 0.91
GYPC-202ENST00000356887 M0R2C6 588 aa20.74■□□□□ 0.91
GYPC-202ENST00000356887 CEBPZQ03701 1054 aaKnown RBP20.74■□□□□ 0.91
GYPC-202ENST00000356887 CCDC186Q7Z3E2 898 aa20.74■□□□□ 0.91
GYPC-202ENST00000356887 CCAR1Q8IX12 1150 aaKnown RBP20.74■□□□□ 0.91
GYPC-202ENST00000356887 FBXL16Q8N461 479 aa20.74■□□□□ 0.91
GYPC-202ENST00000356887 TRIM5Q9C035 493 aa20.74■□□□□ 0.91
GYPC-202ENST00000356887 CTAGE5O15320 804 aa20.73■□□□□ 0.91
GYPC-202ENST00000356887 FOSBP53539 338 aa20.73■□□□□ 0.91
GYPC-202ENST00000356887 ZNF396Q96N95 335 aaPredicted RBP20.73■□□□□ 0.91
GYPC-202ENST00000356887 NCOA5Q9HCD5 579 aaKnown RBP20.73■□□□□ 0.91
GYPC-202ENST00000356887 NKX1-1Q15270 411 aaPredicted RBP20.73■□□□□ 0.91
GYPC-202ENST00000356887 CHMP4CQ96CF2 233 aa20.73■□□□□ 0.91
GYPC-202ENST00000356887 USP28Q96RU2 1077 aa20.73■□□□□ 0.91
GYPC-202ENST00000356887 EVCP57679 992 aa20.72■□□□□ 0.91
GYPC-202ENST00000356887 IQCB1Q15051 598 aa20.72■□□□□ 0.91
GYPC-202ENST00000356887 TAF7LQ5H9L4 462 aa20.72■□□□□ 0.91
GYPC-202ENST00000356887 OSBP2Q969R2 916 aa20.72■□□□□ 0.91
GYPC-202ENST00000356887 ISCA1Q9BUE6 129 aa20.72■□□□□ 0.91
GYPC-202ENST00000356887 FTOQ9C0B1 505 aaKnown RBP eCLIP20.72■□□□□ 0.91
GYPC-202ENST00000356887 GOLPH3LQ9H4A5 285 aa20.72■□□□□ 0.91
GYPC-202ENST00000356887 CEP126Q9P2H0 1117 aa20.72■□□□□ 0.91
GYPC-202ENST00000356887 SNW1Q13573 536 aaKnown RBP20.71■□□□□ 0.91
GYPC-202ENST00000356887 TTLL5Q6EMB2 1281 aa20.71■□□□□ 0.91
GYPC-202ENST00000356887 DRC7Q8IY82 874 aa20.71■□□□□ 0.91
GYPC-202ENST00000356887 NRBP1Q9UHY1 535 aa20.71■□□□□ 0.91
GYPC-202ENST00000356887 WDR17Q8IZU2 1322 aa20.71■□□□□ 0.91
GYPC-202ENST00000356887 PAPPAQ13219 1627 aa20.71■□□□□ 0.91
GYPC-202ENST00000356887 CHST3Q7LGC8 479 aa20.71■□□□□ 0.91
GYPC-202ENST00000356887 ILDR1Q86SU0 546 aaPredicted RBP20.71■□□□□ 0.91
GYPC-202ENST00000356887 ENGASEQ8NFI3 743 aa20.71■□□□□ 0.91
GYPC-202ENST00000356887 CDC25BP30305 580 aa20.7■□□□□ 0.9
GYPC-202ENST00000356887 FDPSP14324 419 aaKnown RBP20.69■□□□□ 0.9
GYPC-202ENST00000356887 TSC1Q92574 1164 aa20.69■□□□□ 0.9
GYPC-202ENST00000356887 NAP1L2Q9ULW6 460 aaPredicted RBP20.69■□□□□ 0.9
GYPC-202ENST00000356887 FKBP4Q02790 459 aaKnown RBP eCLIP20.69■□□□□ 0.9
GYPC-202ENST00000356887 STX1AQ16623 288 aa20.69■□□□□ 0.9
GYPC-202ENST00000356887 LRRFIP1Q32MZ4 808 aaKnown RBP20.69■□□□□ 0.9
GYPC-202ENST00000356887 CCDC158Q5M9N0 1113 aa20.69■□□□□ 0.9
GYPC-202ENST00000356887 ZSCAN25Q6NSZ9 544 aa20.69■□□□□ 0.9
GYPC-202ENST00000356887 SARM1Q6SZW1 724 aa20.69■□□□□ 0.9
GYPC-202ENST00000356887 TOM1L2Q6ZVM7 507 aa20.69■□□□□ 0.9
GYPC-202ENST00000356887 ZNF710Q8N1W2 664 aa20.69■□□□□ 0.9
GYPC-202ENST00000356887 CTNNA3Q9UI47 895 aa20.69■□□□□ 0.9
GYPC-202ENST00000356887 FBXO3Q9UK99 471 aa20.69■□□□□ 0.9
GYPC-202ENST00000356887 CARMIL3Q8ND23 1372 aa20.69■□□□□ 0.9
GYPC-202ENST00000356887 FOXP2O15409 715 aa20.68■□□□□ 0.9
GYPC-202ENST00000356887 LRMPQ12912 555 aa20.68■□□□□ 0.9
GYPC-202ENST00000356887 CCDC57Q2TAC2 916 aa20.68■□□□□ 0.9
GYPC-202ENST00000356887 TNS2Q63HR2 1409 aa20.68■□□□□ 0.9
GYPC-202ENST00000356887 CCDC73Q6ZRK6 1079 aa20.68■□□□□ 0.9
GYPC-202ENST00000356887 C11orf57Q6ZUT1 292 aaPredicted RBP20.68■□□□□ 0.9
GYPC-202ENST00000356887 AKAP2Q9Y2D5 859 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms