RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 KBTBD3Q8NAB2 608 aa18.9■□□□□ 0.62
CTSA-202ENST00000354880 C22orf23Q9BZE7 217 aa18.9■□□□□ 0.62
CTSA-202ENST00000354880 SNRKQ9NRH2 765 aa18.9■□□□□ 0.62
CTSA-202ENST00000354880 XDHP47989 1333 aa18.9■□□□□ 0.62
CTSA-202ENST00000354880 RFX7Q2KHR2 1363 aa18.9■□□□□ 0.62
CTSA-202ENST00000354880 R3HDM1Q15032 1099 aaKnown RBP18.89■□□□□ 0.61
CTSA-202ENST00000354880 CAVIN4Q5BKX8 364 aa18.89■□□□□ 0.61
CTSA-202ENST00000354880 CWC27Q6UX04 472 aaKnown RBP18.89■□□□□ 0.61
CTSA-202ENST00000354880 C2CD5Q86YS7 1000 aa18.89■□□□□ 0.61
CTSA-202ENST00000354880 RUFY2Q8WXA3 655 aa18.89■□□□□ 0.61
CTSA-202ENST00000354880 LEMD3Q9Y2U8 911 aa18.89■□□□□ 0.61
CTSA-202ENST00000354880 ZNF804BA4D1E1 1349 aa18.89■□□□□ 0.61
CTSA-202ENST00000354880 PPEF1O14829 653 aaPredicted RBP18.88■□□□□ 0.61
CTSA-202ENST00000354880 ZAP70P43403 619 aa18.88■□□□□ 0.61
CTSA-202ENST00000354880 PI16Q6UXB8 463 aa18.88■□□□□ 0.61
CTSA-202ENST00000354880 SLC51AQ86UW1 340 aa18.88■□□□□ 0.61
CTSA-202ENST00000354880 TICAM2Q86XR7 235 aa18.88■□□□□ 0.61
CTSA-202ENST00000354880 SGSM2O43147 1006 aa18.88■□□□□ 0.61
CTSA-202ENST00000354880 ZBTB7AO95365 584 aa18.88■□□□□ 0.61
CTSA-202ENST00000354880 GYG1P46976 350 aa18.88■□□□□ 0.61
CTSA-202ENST00000354880 ANTXR1Q9H6X2 564 aa18.88■□□□□ 0.61
CTSA-202ENST00000354880 C10orf71Q711Q0 1435 aa18.87■□□□□ 0.61
CTSA-202ENST00000354880 ANP32AP39687 249 aaKnown RBP18.87■□□□□ 0.61
CTSA-202ENST00000354880 STYK1Q6J9G0 422 aa18.87■□□□□ 0.61
CTSA-202ENST00000354880 VPS37DQ86XT2 251 aa18.87■□□□□ 0.61
CTSA-202ENST00000354880 SP8Q8IXZ3 490 aa18.87■□□□□ 0.61
CTSA-202ENST00000354880 ZNF622Q969S3 477 aaKnown RBP eCLIP18.87■□□□□ 0.617e-8■□□□□ 9.1
CTSA-202ENST00000354880 MTFR1LQ9H019 292 aa18.87■□□□□ 0.61
CTSA-202ENST00000354880 IL25Q9H293 177 aa18.87■□□□□ 0.61
CTSA-202ENST00000354880 NSFL1CQ9UNZ2 370 aaKnown RBP18.87■□□□□ 0.61
CTSA-202ENST00000354880 LRRC37AA6NMS7 1700 aa18.86■□□□□ 0.61
CTSA-202ENST00000354880 GPSM2P81274 684 aa18.86■□□□□ 0.61
CTSA-202ENST00000354880 RASGRF1Q13972 1273 aa18.86■□□□□ 0.61
CTSA-202ENST00000354880 FAM84BQ96KN1 310 aaPredicted RBP18.86■□□□□ 0.61
CTSA-202ENST00000354880 USP26Q9BXU7 913 aa18.86■□□□□ 0.61
CTSA-202ENST00000354880 GNL3LQ9NVN8 582 aaKnown RBP18.86■□□□□ 0.61
CTSA-202ENST00000354880 PODXL2Q9NZ53 605 aa18.86■□□□□ 0.61
CTSA-202ENST00000354880 HMG20BQ9P0W2 317 aa18.86■□□□□ 0.61
CTSA-202ENST00000354880 ATP6V0A2Q9Y487 856 aa18.86■□□□□ 0.61
CTSA-202ENST00000354880 GOLGB1Q14789 3259 aaKnown RBP18.86■□□□□ 0.61
CTSA-202ENST00000354880 NMIQ13287 307 aaPredicted RBP18.86■□□□□ 0.61
CTSA-202ENST00000354880 TTF1Q15361 905 aaPredicted RBP18.86■□□□□ 0.61
CTSA-202ENST00000354880 FBXO33Q7Z6M2 555 aa18.86■□□□□ 0.61
CTSA-202ENST00000354880 SPATA5Q8NB90 893 aa18.86■□□□□ 0.61
CTSA-202ENST00000354880 FAM227BQ96M60 508 aa18.86■□□□□ 0.61
CTSA-202ENST00000354880 CYP2E1P05181 493 aaPredicted RBP18.85■□□□□ 0.61
CTSA-202ENST00000354880 ATP2B4P23634 1241 aa18.85■□□□□ 0.61
CTSA-202ENST00000354880 KLRK1P26718 216 aa18.85■□□□□ 0.61
CTSA-202ENST00000354880 CHRNA5P30532 468 aa18.85■□□□□ 0.61
CTSA-202ENST00000354880 RBM25P49756 843 aaKnown RBP18.85■□□□□ 0.61
CTSA-202ENST00000354880 ANO2Q9NQ90 1003 aa18.85■□□□□ 0.61
CTSA-202ENST00000354880 GGA1Q9UJY5 639 aa18.85■□□□□ 0.61
CTSA-202ENST00000354880 RAD50Q92878 1312 aa18.84■□□□□ 0.61
CTSA-202ENST00000354880 POLD1P28340 1107 aa18.84■□□□□ 0.61
CTSA-202ENST00000354880 LRRFIP1Q32MZ4 808 aaKnown RBP18.84■□□□□ 0.61
CTSA-202ENST00000354880 ATF5Q9Y2D1 282 aaPredicted RBP18.84■□□□□ 0.61
CTSA-202ENST00000354880 IRS2Q9Y4H2 1338 aa18.84■□□□□ 0.61
CTSA-202ENST00000354880 A0A0D9SFI3 127 aa18.84■□□□□ 0.61
CTSA-202ENST00000354880 HIBADHP31937 336 aaKnown RBP18.84■□□□□ 0.61
CTSA-202ENST00000354880 CACNA1SQ13698 1873 aa18.83■□□□□ 0.61
CTSA-202ENST00000354880 UFL1O94874 794 aa18.83■□□□□ 0.6
CTSA-202ENST00000354880 C15orf52Q6ZUT6 534 aaKnown RBP18.83■□□□□ 0.6
CTSA-202ENST00000354880 TXNRD3Q86VQ6 643 aa18.83■□□□□ 0.6
CTSA-202ENST00000354880 CNKSR1Q969H4 720 aa18.83■□□□□ 0.6
CTSA-202ENST00000354880 TMX4Q9H1E5 349 aaPredicted RBP18.83■□□□□ 0.6
CTSA-202ENST00000354880 IQSEC3Q9UPP2 1182 aaPredicted RBP18.83■□□□□ 0.6
CTSA-202ENST00000354880 EPB41L2O43491 1005 aaKnown RBP18.82■□□□□ 0.6
CTSA-202ENST00000354880 LTBP1Q14766 1721 aa18.82■□□□□ 0.6
CTSA-202ENST00000354880 SEMA3EO15041 775 aa18.81■□□□□ 0.6
CTSA-202ENST00000354880 RNF113AO15541 343 aaKnown RBP18.81■□□□□ 0.6
CTSA-202ENST00000354880 ZFYP08048 801 aaPredicted RBP18.81■□□□□ 0.6
CTSA-202ENST00000354880 PRPF40BQ6NWY9 871 aaKnown RBP18.81■□□□□ 0.6
CTSA-202ENST00000354880 KIAA1211Q6ZU35 1233 aa18.81■□□□□ 0.6
CTSA-202ENST00000354880 TBC1D16Q8TBP0 767 aa18.81■□□□□ 0.6
CTSA-202ENST00000354880 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.81■□□□□ 0.63e-6■■□□□ 12.8
CTSA-202ENST00000354880 PIH1D3Q9NQM4 214 aaKnown RBP18.81■□□□□ 0.6
CTSA-202ENST00000354880 POLLQ9UGP5 575 aa18.81■□□□□ 0.6
CTSA-202ENST00000354880 DENND2AQ9ULE3 1009 aa18.81■□□□□ 0.6
CTSA-202ENST00000354880 MYH7P12883 1935 aa18.81■□□□□ 0.6
CTSA-202ENST00000354880 PSDA5PKW4 1024 aaPredicted RBP18.81■□□□□ 0.6
CTSA-202ENST00000354880 CHGBP05060 677 aa18.81■□□□□ 0.6
CTSA-202ENST00000354880 KIF13BQ9NQT8 1826 aa18.81■□□□□ 0.6
CTSA-202ENST00000354880 SLX4Q8IY92 1834 aa18.8■□□□□ 0.6
CTSA-202ENST00000354880 FRAT2O75474 233 aaPredicted RBP18.8■□□□□ 0.6
CTSA-202ENST00000354880 MCMDC2Q4G0Z9 681 aa18.8■□□□□ 0.6
CTSA-202ENST00000354880 ZSCAN25Q6NSZ9 544 aa18.8■□□□□ 0.6
CTSA-202ENST00000354880 MPNDQ8N594 471 aa18.8■□□□□ 0.6
CTSA-202ENST00000354880 LSG1Q9H089 658 aaKnown RBP18.8■□□□□ 0.6
CTSA-202ENST00000354880 HELLSQ9NRZ9 838 aa18.8■□□□□ 0.6
CTSA-202ENST00000354880 MED23Q9ULK4 1368 aa18.8■□□□□ 0.6
CTSA-202ENST00000354880 MYO5AQ9Y4I1 1855 aaKnown RBP18.8■□□□□ 0.6
CTSA-202ENST00000354880 C6orf229H3BNL8 230 aa18.79■□□□□ 0.6
CTSA-202ENST00000354880 ZBTB22O15209 634 aa18.79■□□□□ 0.6
CTSA-202ENST00000354880 IDH1O75874 414 aaKnown RBP18.79■□□□□ 0.6
CTSA-202ENST00000354880 ZMYM1Q5SVZ6 1142 aa18.79■□□□□ 0.6
CTSA-202ENST00000354880 OLFM4Q6UX06 510 aa18.79■□□□□ 0.6
CTSA-202ENST00000354880 ZNF804AQ7Z570 1209 aa18.79■□□□□ 0.6
CTSA-202ENST00000354880 GPR101Q96P66 508 aaPredicted RBP18.79■□□□□ 0.6
CTSA-202ENST00000354880 MYH13Q9UKX3 1938 aa18.79■□□□□ 0.6
CTSA-202ENST00000354880 PDS5AQ29RF7 1337 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms