RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 KLRK1P26718 216 aa20.34■□□□□ 0.85
PDGFA-201ENST00000354513 CCT4P50991 539 aaKnown RBP20.34■□□□□ 0.85
PDGFA-201ENST00000354513 NOGQ13253 232 aa20.34■□□□□ 0.85
PDGFA-201ENST00000354513 SCARF1Q14162 830 aa20.34■□□□□ 0.85
PDGFA-201ENST00000354513 FAM161AQ3B820 660 aa20.34■□□□□ 0.85
PDGFA-201ENST00000354513 DACT2Q5SW24 774 aa20.34■□□□□ 0.85
PDGFA-201ENST00000354513 DCAF8Q5TAQ9 597 aa20.34■□□□□ 0.85
PDGFA-201ENST00000354513 ANGEL2Q5VTE6 544 aaKnown RBP20.34■□□□□ 0.85
PDGFA-201ENST00000354513 RGMBQ6NW40 437 aa20.34■□□□□ 0.85
PDGFA-201ENST00000354513 USP17L1Q7RTZ2 530 aa20.34■□□□□ 0.85
PDGFA-201ENST00000354513 PODNQ7Z5L7 613 aa20.34■□□□□ 0.85
PDGFA-201ENST00000354513 MRS2Q9HD23 443 aa20.34■□□□□ 0.85
PDGFA-201ENST00000354513 SPINK5Q9NQ38 1064 aaPredicted RBP20.34■□□□□ 0.85
PDGFA-201ENST00000354513 ARAP2Q8WZ64 1704 aa20.34■□□□□ 0.85
PDGFA-201ENST00000354513 CSF1RP07333 972 aa20.33■□□□□ 0.85
PDGFA-201ENST00000354513 MYOZ2Q9NPC6 264 aa20.33■□□□□ 0.85
PDGFA-201ENST00000354513 IRS2Q9Y4H2 1338 aa20.32■□□□□ 0.84
PDGFA-201ENST00000354513 CA12O43570 354 aa20.32■□□□□ 0.84
PDGFA-201ENST00000354513 DNAAF4Q8WXU2 420 aa20.32■□□□□ 0.84
PDGFA-201ENST00000354513 SCAF8Q9UPN6 1271 aaKnown RBP20.32■□□□□ 0.84
PDGFA-201ENST00000354513 PITPNM2Q9BZ72 1349 aa20.32■□□□□ 0.84
PDGFA-201ENST00000354513 SLC10A3P09131 477 aa20.31■□□□□ 0.84
PDGFA-201ENST00000354513 USP17L8P0C7I0 530 aa20.31■□□□□ 0.84
PDGFA-201ENST00000354513 ITGA6P23229 1130 aa20.31■□□□□ 0.84
PDGFA-201ENST00000354513 EXOSC9Q06265 439 aaKnown RBP20.31■□□□□ 0.84
PDGFA-201ENST00000354513 SULF1Q8IWU6 871 aa20.31■□□□□ 0.84
PDGFA-201ENST00000354513 C2orf69Q8N8R5 385 aa20.31■□□□□ 0.84
PDGFA-201ENST00000354513 FKBP5Q13451 457 aaPredicted RBP20.3■□□□□ 0.84
PDGFA-201ENST00000354513 LINS1Q8NG48 757 aa20.3■□□□□ 0.84
PDGFA-201ENST00000354513 SALL2Q9Y467 1007 aaPredicted RBP20.3■□□□□ 0.84
PDGFA-201ENST00000354513 KIF23Q02241 960 aaPredicted RBP20.29■□□□□ 0.84
PDGFA-201ENST00000354513 NBPF9Q3BBW0 867 aa20.29■□□□□ 0.84
PDGFA-201ENST00000354513 WDR63Q8IWG1 891 aa20.29■□□□□ 0.84
PDGFA-201ENST00000354513 ZNF804BA4D1E1 1349 aa20.29■□□□□ 0.84
PDGFA-201ENST00000354513 F6X3S4 739 aa20.28■□□□□ 0.84
PDGFA-201ENST00000354513 FOXO4P98177 505 aa20.28■□□□□ 0.84
PDGFA-201ENST00000354513 RASAL3Q86YV0 1011 aa20.28■□□□□ 0.84
PDGFA-201ENST00000354513 LEMD3Q9Y2U8 911 aa20.28■□□□□ 0.84
PDGFA-201ENST00000354513 SNAP23O00161 211 aa20.27■□□□□ 0.84
PDGFA-201ENST00000354513 IGHMBP2P38935 993 aaKnown RBP20.27■□□□□ 0.84
PDGFA-201ENST00000354513 ZNF157P51786 506 aaPredicted RBP20.27■□□□□ 0.84
PDGFA-201ENST00000354513 STRIP1Q5VSL9 837 aa20.27■□□□□ 0.84
PDGFA-201ENST00000354513 MOB2Q70IA6 237 aa20.27■□□□□ 0.84
PDGFA-201ENST00000354513 MCOLN1Q9GZU1 580 aa20.27■□□□□ 0.84
PDGFA-201ENST00000354513 COA1Q9GZY4 146 aa20.27■□□□□ 0.84
PDGFA-201ENST00000354513 MYH16Q9H6N6 1097 aa20.27■□□□□ 0.84
PDGFA-201ENST00000354513 TNRC18O15417 2968 aaPredicted RBP20.27■□□□□ 0.83
PDGFA-201ENST00000354513 CHRNDQ07001 517 aa20.27■□□□□ 0.83
PDGFA-201ENST00000354513 BEND3Q5T5X7 828 aa20.27■□□□□ 0.83
PDGFA-201ENST00000354513 CCDC102AQ96A19 550 aa20.27■□□□□ 0.83
PDGFA-201ENST00000354513 OTOFQ9HC10 1997 aa20.26■□□□□ 0.83
PDGFA-201ENST00000354513 WNT10BO00744 389 aa20.26■□□□□ 0.83
PDGFA-201ENST00000354513 EPHA10Q5JZY3 1008 aa20.26■□□□□ 0.83
PDGFA-201ENST00000354513 PRAMEF18Q5VWM3 479 aa20.26■□□□□ 0.83
PDGFA-201ENST00000354513 MYO3BQ8WXR4 1341 aa20.25■□□□□ 0.83
PDGFA-201ENST00000354513 SASH1O94885 1247 aa20.25■□□□□ 0.83
PDGFA-201ENST00000354513 FBXW7Q969H0 707 aa20.25■□□□□ 0.83
PDGFA-201ENST00000354513 ZBED3Q96IU2 234 aaPredicted RBP20.25■□□□□ 0.83
PDGFA-201ENST00000354513 CSRNP1Q96S65 589 aa20.25■□□□□ 0.83
PDGFA-201ENST00000354513 ANKRD2Q9GZV1 360 aa20.25■□□□□ 0.83
PDGFA-201ENST00000354513 RNF186Q9NXI6 227 aa20.25■□□□□ 0.83
PDGFA-201ENST00000354513 SAGE1Q9NXZ1 904 aa20.25■□□□□ 0.83
PDGFA-201ENST00000354513 SSC5DA1L4H1 1573 aa20.23■□□□□ 0.83
PDGFA-201ENST00000354513 ZNF316A6NFI3 1004 aaPredicted RBP20.23■□□□□ 0.83
PDGFA-201ENST00000354513 ANP32CO43423 234 aa20.23■□□□□ 0.83
PDGFA-201ENST00000354513 FKBP1BP68106 108 aa20.23■□□□□ 0.83
PDGFA-201ENST00000354513 CERS5Q8N5B7 392 aa20.23■□□□□ 0.83
PDGFA-201ENST00000354513 MPHOSPH8Q99549 860 aa20.23■□□□□ 0.83
PDGFA-201ENST00000354513 ANKRD18BA2A2Z9 1011 aa20.22■□□□□ 0.83
PDGFA-201ENST00000354513 CCDC85CA6NKD9 419 aa20.22■□□□□ 0.83
PDGFA-201ENST00000354513 TAF5LO75529 589 aa20.22■□□□□ 0.83
PDGFA-201ENST00000354513 GTF2IP78347 998 aa20.22■□□□□ 0.83
PDGFA-201ENST00000354513 DGKZQ13574 1117 aa20.22■□□□□ 0.83
PDGFA-201ENST00000354513 C15orf52Q6ZUT6 534 aaKnown RBP20.22■□□□□ 0.83
PDGFA-201ENST00000354513 KIAA0825Q8IV33 1275 aa20.22■□□□□ 0.83
PDGFA-201ENST00000354513 HELBQ8NG08 1087 aaPredicted RBP20.22■□□□□ 0.83
PDGFA-201ENST00000354513 CD209Q9NNX6 404 aa20.22■□□□□ 0.83
PDGFA-201ENST00000354513 TRPA1O75762 1119 aa20.21■□□□□ 0.83
PDGFA-201ENST00000354513 TTLL5Q6EMB2 1281 aa20.21■□□□□ 0.83
PDGFA-201ENST00000354513 ZNF521Q96K83 1311 aa20.2■□□□□ 0.82
PDGFA-201ENST00000354513 UBE2Q2LH0YL09 131 aa20.2■□□□□ 0.82
PDGFA-201ENST00000354513 RGS19P49795 217 aa20.2■□□□□ 0.82
PDGFA-201ENST00000354513 ZNF594Q96JF6 807 aaPredicted RBP20.2■□□□□ 0.82
PDGFA-201ENST00000354513 PCDHAC2Q9Y5I4 1007 aa20.2■□□□□ 0.82
PDGFA-201ENST00000354513 COL1A1P02452 1464 aaPredicted RBP20.2■□□□□ 0.82
PDGFA-201ENST00000354513 LMBR1LQ6UX01 489 aa20.19■□□□□ 0.82
PDGFA-201ENST00000354513 AOX1Q06278 1338 aa20.19■□□□□ 0.82
PDGFA-201ENST00000354513 MYH13Q9UKX3 1938 aa20.18■□□□□ 0.82
PDGFA-201ENST00000354513 GRM8O00222 908 aa20.18■□□□□ 0.82
PDGFA-201ENST00000354513 IFIT5Q13325 482 aaKnown RBP20.18■□□□□ 0.82
PDGFA-201ENST00000354513 OGFOD1Q8N543 542 aa20.18■□□□□ 0.82
PDGFA-201ENST00000354513 KAZALD1Q96I82 304 aa20.18■□□□□ 0.82
PDGFA-201ENST00000354513 IL1R1P14778 569 aa20.17■□□□□ 0.82
PDGFA-201ENST00000354513 KCNJ4P48050 445 aa20.17■□□□□ 0.82
PDGFA-201ENST00000354513 CHMP3Q9Y3E7 222 aa20.17■□□□□ 0.82
PDGFA-201ENST00000354513 MMP14P50281 582 aa20.16■□□□□ 0.82
PDGFA-201ENST00000354513 FAM9BQ8IZU0 186 aa20.16■□□□□ 0.82
PDGFA-201ENST00000354513 FZD1Q9UP38 647 aa20.16■□□□□ 0.82
PDGFA-201ENST00000354513 APOBEC3FQ8IUX4 373 aaKnown RBP20.15■□□□□ 0.82
PDGFA-201ENST00000354513 MTMR14Q8NCE2 650 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms