RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 FKBP15Q5T1M5 1219 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 ZGPATQ8N5A5 531 aaKnown RBP5.7□□□□□ -1.5
SKP1-202ENST00000353411 SPDL1Q96EA4 605 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 DNAJC5BQ9UF47 199 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 ALDH3A1P30838 453 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 LONRF2Q1L5Z9 754 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 GKAP1Q5VSY0 366 aaPredicted RBP5.7□□□□□ -1.5
SKP1-202ENST00000353411 APLFQ8IW19 511 aaPredicted RBP5.7□□□□□ -1.5
SKP1-202ENST00000353411 IFNKQ9P0W0 207 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 PYCARDQ9ULZ3 195 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 IFI16Q16666 785 aaKnown RBP5.7□□□□□ -1.5
SKP1-202ENST00000353411 TBC1D22AQ8WUA7 517 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 PAIP2BQ9ULR5 123 aaKnown RBP5.7□□□□□ -1.5
SKP1-202ENST00000353411 PEX14O75381 377 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 KMT5BQ4FZB7 885 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 CLEC17AQ6ZS10 378 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 CAPRIN2Q6IMN6 1127 aaKnown RBP5.7□□□□□ -1.5
SKP1-202ENST00000353411 RAB11FIP3O75154 756 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 SPAG1Q07617 926 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 CCDC178Q5BJE1 867 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 TSR2Q969E8 191 aaKnown RBP5.7□□□□□ -1.5
SKP1-202ENST00000353411 BSDC1Q9NW68 430 aaPredicted RBP5.7□□□□□ -1.5
SKP1-202ENST00000353411 PTPRCP08575 1304 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 E7EVH7 732 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 SURF6O75683 361 aaKnown RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 RPSAP08865 295 aaKnown RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 HSP90AA5PQ58FG0 334 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 WASF1Q92558 559 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 ORC3Q9UBD5 711 aaPredicted RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 MARCH6O60337 910 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 NOL3O60936 208 aaKnown RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 MUM1Q2TAK8 710 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 IFT20Q8IY31 132 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 MRPS27Q92552 414 aaKnown RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 OSBPL9Q96SU4 736 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 CLSTN2Q9H4D0 955 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 THEGQ9P2T0 379 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 ZFXP17010 805 aaPredicted RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 RANBP1P43487 201 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 PSMD2Q13200 908 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 SDCCAG8Q86SQ7 713 aaPredicted RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 IFNLR1Q8IU57 520 aaPredicted RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 SUGP1Q8IWZ8 645 aaKnown RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 ZNF513Q8N8E2 541 aaPredicted RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 USP26Q9BXU7 913 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 PRDM16Q9HAZ2 1276 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 STAMBPO95630 424 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 BRD1O95696 1058 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 MTHFSP49914 203 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 NBPF10Q6P3W6 841 aaKnown RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 SLC30A9Q6PML9 568 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 SSH1Q8WYL5 1049 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 PYM1Q9BRP8 204 aaKnown RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 CWC27Q6UX04 472 aaKnown RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 PPP1R7Q15435 360 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 STAG1Q8WVM7 1258 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 SPAG5Q96R06 1193 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 LZTFL1Q9NQ48 299 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 FAM114A2Q9NRY5 505 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 ATP5DP30049 168 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 RASIP1Q5U651 963 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 CCDC102BQ68D86 513 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 VPS36Q86VN1 386 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 TRIM22Q8IYM9 498 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 RBM42Q9BTD8 480 aaKnown RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 SCOCQ9UIL1 159 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 ZNF608Q9ULD9 1512 aaPredicted RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 KIF5AQ12840 1032 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 DRP2Q13474 957 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 MAP7D1Q3KQU3 841 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 ISM2Q6H9L7 571 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 INTS8Q75QN2 995 aaKnown RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 ARHGAP24Q8N264 748 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 P3H4Q92791 437 aa5.69□□□□□ -1.5
SKP1-202ENST00000353411 BICC1Q9H694 974 aaKnown RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 NOP53Q9NZM5 478 aaKnown RBP5.69□□□□□ -1.5
SKP1-202ENST00000353411 RNF40O75150 1001 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 FGFR1OPO95684 399 aaKnown RBP5.68□□□□□ -1.5
SKP1-202ENST00000353411 SESN3P58005 492 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 SELENOOQ9BVL4 669 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 RNF216Q9NWF9 866 aaPredicted RBP5.68□□□□□ -1.5
SKP1-202ENST00000353411 TRIM58Q8NG06 486 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 IQCGQ9H095 443 aaKnown RBP5.68□□□□□ -1.5
SKP1-202ENST00000353411 TFIP11Q9UBB9 837 aaKnown RBP5.68□□□□□ -1.5
SKP1-202ENST00000353411 IGF1RP08069 1367 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 AKR1B15C9JRZ8 316 aaPredicted RBP5.68□□□□□ -1.5
SKP1-202ENST00000353411 CORO7P57737 925 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 ARHGAP45Q92619 1136 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 LRRC45Q96CN5 670 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 FAN1Q9Y2M0 1017 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 USP16Q9Y5T5 823 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 RTL1A6NKG5 1358 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 MYH10P35580 1976 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 TRIM66O15016 1216 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 GLRX3O76003 335 aaKnown RBP5.68□□□□□ -1.5
SKP1-202ENST00000353411 HOOK3Q86VS8 718 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 CTNNBL1Q8WYA6 563 aaPredicted RBP5.68□□□□□ -1.5
SKP1-202ENST00000353411 HMG20BQ9P0W2 317 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 SATB2Q9UPW6 733 aa5.68□□□□□ -1.5
SKP1-202ENST00000353411 BLMP54132 1417 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms