RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 PNMA6AP0CW24 399 aaPredicted RBP20.69■□□□□ 0.9
APP-202ENST00000348990 MARCKSP29966 332 aaPredicted RBP20.69■□□□□ 0.9
APP-202ENST00000348990 CCDC34Q96HJ3 373 aa20.69■□□□□ 0.9
APP-202ENST00000348990 HAND2P61296 217 aa20.68■□□□□ 0.9
APP-202ENST00000348990 STOX1Q6ZVD7 989 aa20.68■□□□□ 0.9
APP-202ENST00000348990 NBPF11Q86T75 865 aa20.68■□□□□ 0.9
APP-202ENST00000348990 EPHA10Q5JZY3 1008 aa20.68■□□□□ 0.9
APP-202ENST00000348990 C8orf76Q96K31 380 aa20.68■□□□□ 0.9
APP-202ENST00000348990 MED23Q9ULK4 1368 aa20.68■□□□□ 0.9
APP-202ENST00000348990 UBE3BQ7Z3V4 1068 aa20.68■□□□□ 0.9
APP-202ENST00000348990 IMPACTQ9P2X3 320 aa20.68■□□□□ 0.9
APP-202ENST00000348990 CLIC4Q9Y696 253 aa20.68■□□□□ 0.9
APP-202ENST00000348990 RIMBP3CA6NJZ7 1639 aa20.67■□□□□ 0.9
APP-202ENST00000348990 RIMBP3BA6NNM3 1639 aa20.67■□□□□ 0.9
APP-202ENST00000348990 RIMBP3Q9UFD9 1639 aa20.67■□□□□ 0.9
APP-202ENST00000348990 XRN1Q8IZH2 1706 aaKnown RBP20.67■□□□□ 0.9
APP-202ENST00000348990 ATP1A3P13637 1013 aa20.67■□□□□ 0.9
APP-202ENST00000348990 HNRNPH2P55795 449 aaKnown RBP20.67■□□□□ 0.9
APP-202ENST00000348990 ATP5J2-PTCD1G3V325 749 aa20.67■□□□□ 0.9
APP-202ENST00000348990 PTCD1O75127 700 aaKnown RBP20.67■□□□□ 0.9
APP-202ENST00000348990 CEBPAP49715 358 aaPredicted RBP20.67■□□□□ 0.9
APP-202ENST00000348990 UBASH3AP57075 661 aa20.67■□□□□ 0.9
APP-202ENST00000348990 TNNI3KQ59H18 835 aa20.67■□□□□ 0.9
APP-202ENST00000348990 ENGASEQ8NFI3 743 aa20.67■□□□□ 0.9
APP-202ENST00000348990 LLPHQ9BRT6 129 aaKnown RBP20.67■□□□□ 0.9
APP-202ENST00000348990 ALDH8A1Q9H2A2 487 aaPredicted RBP20.67■□□□□ 0.9
APP-202ENST00000348990 GJB4Q9NTQ9 266 aa20.67■□□□□ 0.9
APP-202ENST00000348990 FPGT-TNNI3KV9GXZ4 949 aa20.67■□□□□ 0.9
APP-202ENST00000348990 CTDNEP1O95476 244 aa20.66■□□□□ 0.9
APP-202ENST00000348990 HMGB1P09429 215 aaKnown RBP20.66■□□□□ 0.9
APP-202ENST00000348990 TNNT3P45378 269 aaPredicted RBP20.66■□□□□ 0.9
APP-202ENST00000348990 ETF1P62495 437 aaKnown RBP20.66■□□□□ 0.9
APP-202ENST00000348990 FANCCQ00597 558 aa20.66■□□□□ 0.9
APP-202ENST00000348990 ZSWIM4Q9H7M6 989 aa20.66■□□□□ 0.9
APP-202ENST00000348990 ZCCHC17Q9NP64 241 aaKnown RBP20.66■□□□□ 0.9
APP-202ENST00000348990 A0A0G2JLW4 131 aa20.66■□□□□ 0.9
APP-202ENST00000348990 ZFP91Q96JP5 570 aaPredicted RBP20.66■□□□□ 0.9
APP-202ENST00000348990 GPHNQ9NQX3 736 aaPredicted RBP20.66■□□□□ 0.9
APP-202ENST00000348990 TUBGCP6Q96RT7 1819 aa20.66■□□□□ 0.9
APP-202ENST00000348990 SPTLC2O15270 562 aa20.66■□□□□ 0.9
APP-202ENST00000348990 TSGA10IPQ3SY00 556 aa20.66■□□□□ 0.9
APP-202ENST00000348990 AKAP4Q5JQC9 854 aa20.66■□□□□ 0.9
APP-202ENST00000348990 COPS6Q7L5N1 327 aa20.66■□□□□ 0.9
APP-202ENST00000348990 XAGE3Q8WTP9 111 aa20.66■□□□□ 0.9
APP-202ENST00000348990 FMR1NBQ8N0W7 255 aaPredicted RBP20.65■□□□□ 0.9
APP-202ENST00000348990 STK11IPQ8N1F8 1099 aa20.65■□□□□ 0.9
APP-202ENST00000348990 OSBPL5Q9H0X9 879 aaPredicted RBP20.65■□□□□ 0.9
APP-202ENST00000348990 ZNF202O95125 648 aa20.65■□□□□ 0.9
APP-202ENST00000348990 PLCD3Q8N3E9 789 aa20.65■□□□□ 0.9
APP-202ENST00000348990 SMARCC2Q8TAQ2 1214 aa20.65■□□□□ 0.9
APP-202ENST00000348990 RNMTO43148 476 aaKnown RBP20.65■□□□□ 0.9
APP-202ENST00000348990 ATP5JP18859 108 aa20.65■□□□□ 0.9
APP-202ENST00000348990 ADALQ6DHV7 355 aa20.65■□□□□ 0.9
APP-202ENST00000348990 FHOD1Q9Y613 1164 aa20.65■□□□□ 0.9
APP-202ENST00000348990 EVCP57679 992 aa20.64■□□□□ 0.89
APP-202ENST00000348990 TMEM2Q9UHN6 1383 aa20.64■□□□□ 0.89
APP-202ENST00000348990 GNG11P61952 73 aa20.64■□□□□ 0.89
APP-202ENST00000348990 TTLL5Q6EMB2 1281 aa20.64■□□□□ 0.89
APP-202ENST00000348990 ORC3Q9UBD5 711 aaPredicted RBP20.64■□□□□ 0.89
APP-202ENST00000348990 PSDA5PKW4 1024 aaPredicted RBP20.63■□□□□ 0.89
APP-202ENST00000348990 IGKV5-2P06315 115 aa20.63■□□□□ 0.89
APP-202ENST00000348990 TOP1P11387 765 aaKnown RBP20.63■□□□□ 0.89
APP-202ENST00000348990 WASHC4Q2M389 1173 aa20.63■□□□□ 0.89
APP-202ENST00000348990 TNRQ92752 1358 aa20.63■□□□□ 0.89
APP-202ENST00000348990 H2AFXP16104 143 aaPredicted RBP20.63■□□□□ 0.89
APP-202ENST00000348990 USPL1Q5W0Q7 1092 aa20.63■□□□□ 0.89
APP-202ENST00000348990 PDIA3P30101 505 aaKnown RBP20.63■□□□□ 0.89
APP-202ENST00000348990 SPATA31D1Q6ZQQ2 1576 aa20.62■□□□□ 0.89
APP-202ENST00000348990 CCP110O43303 1012 aa20.62■□□□□ 0.89
APP-202ENST00000348990 TIMM10P62072 90 aa20.62■□□□□ 0.89
APP-202ENST00000348990 PSME1Q06323 249 aa20.62■□□□□ 0.89
APP-202ENST00000348990 GPS2Q13227 327 aa20.62■□□□□ 0.89
APP-202ENST00000348990 COL15A1P39059 1388 aa20.62■□□□□ 0.89
APP-202ENST00000348990 E7EWF7 191 aa20.62■□□□□ 0.89
APP-202ENST00000348990 L2HGDHQ9H9P8 463 aa20.62■□□□□ 0.89
APP-202ENST00000348990 DDX21Q9NR30 783 aaKnown RBP eCLIP20.62■□□□□ 0.89
APP-202ENST00000348990 ERBB3P21860 1342 aa20.62■□□□□ 0.89
APP-202ENST00000348990 PLA2G4AP47712 749 aa20.62■□□□□ 0.89
APP-202ENST00000348990 GCKRQ14397 625 aa20.62■□□□□ 0.89
APP-202ENST00000348990 KCNG4Q8TDN1 519 aa20.62■□□□□ 0.89
APP-202ENST00000348990 TRIM34Q9BYJ4 488 aa20.62■□□□□ 0.89
APP-202ENST00000348990 ADGRL3Q9HAR2 1447 aa20.62■□□□□ 0.89
APP-202ENST00000348990 FKBP4Q02790 459 aaKnown RBP eCLIP20.61■□□□□ 0.89
APP-202ENST00000348990 IP6K1Q92551 441 aa20.61■□□□□ 0.89
APP-202ENST00000348990 GOLGA8BA8MQT2 603 aa20.61■□□□□ 0.89
APP-202ENST00000348990 LINC00301Q8NCQ3 95 aa20.61■□□□□ 0.89
APP-202ENST00000348990 SNRKQ9NRH2 765 aa20.61■□□□□ 0.89
APP-202ENST00000348990 FAM208AQ9UK61 1670 aaKnown RBP20.61■□□□□ 0.89
APP-202ENST00000348990 TECPR2O15040 1411 aa20.61■□□□□ 0.89
APP-202ENST00000348990 A0A087WZG4 1122 aa20.6■□□□□ 0.89
APP-202ENST00000348990 NEURL1BA8MQ27 555 aa20.6■□□□□ 0.89
APP-202ENST00000348990 NLRP12P59046 1061 aa20.6■□□□□ 0.89
APP-202ENST00000348990 OLFM4Q6UX06 510 aa20.6■□□□□ 0.89
APP-202ENST00000348990 CASQ1P31415 396 aa20.6■□□□□ 0.89
APP-202ENST00000348990 CYP2C19P33261 490 aa20.6■□□□□ 0.89
APP-202ENST00000348990 GYS2P54840 703 aa20.6■□□□□ 0.89
APP-202ENST00000348990 ATL3Q6DD88 541 aa20.6■□□□□ 0.89
APP-202ENST00000348990 ZNF609O15014 1411 aa20.6■□□□□ 0.89
APP-202ENST00000348990 KLF18A0A0U1RQI7 1052 aa20.6■□□□□ 0.89
APP-202ENST00000348990 KRBA2Q6ZNG9 492 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms