RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 CCDC150Q8NCX0 1101 aa21.3■■□□□ 1
UBE3C-201ENST00000348165 MRPS27Q92552 414 aaKnown RBP21.3■■□□□ 1
UBE3C-201ENST00000348165 EIF2AK4Q9P2K8 1649 aaKnown RBP21.29■■□□□ 1
UBE3C-201ENST00000348165 GNAT2P19087 354 aa21.29■■□□□ 1
UBE3C-201ENST00000348165 PZPP20742 1482 aa21.29■■□□□ 1
UBE3C-201ENST00000348165 LDHBP07195 334 aaKnown RBP21.29■■□□□ 1
UBE3C-201ENST00000348165 STAT6P42226 847 aa21.29■■□□□ 1
UBE3C-201ENST00000348165 CTNNBL1Q8WYA6 563 aaPredicted RBP21.29■■□□□ 1
UBE3C-201ENST00000348165 TRAPPC3LQ5T215 181 aa21.29■■□□□ 1
UBE3C-201ENST00000348165 OTUD7AQ8TE49 926 aaPredicted RBP21.29■■□□□ 1
UBE3C-201ENST00000348165 BMP15O95972 392 aa21.29■■□□□ 1
UBE3C-201ENST00000348165 PLBD2Q8NHP8 589 aa21.29■■□□□ 1
UBE3C-201ENST00000348165 MMRN2Q9H8L6 949 aa21.29■■□□□ 1
UBE3C-201ENST00000348165 SBNO1A3KN83 1393 aa21.28■■□□□ 1
UBE3C-201ENST00000348165 ERMNQ8TAM6 284 aa21.28■■□□□ 1
UBE3C-201ENST00000348165 CTTNBP2Q8WZ74 1663 aa21.28■■□□□ 1
UBE3C-201ENST00000348165 CPA1P15085 419 aa21.28■■□□□ 1
UBE3C-201ENST00000348165 DHX32Q7L7V1 743 aaKnown RBP21.28■■□□□ 1
UBE3C-201ENST00000348165 BBXQ8WY36 941 aaPredicted RBP21.28■■□□□ 1
UBE3C-201ENST00000348165 A0A1B0GUL7 405 aa21.28■■□□□ 1
UBE3C-201ENST00000348165 EYA2O00167 538 aa21.28■■□□□ 1
UBE3C-201ENST00000348165 NEMFO60524 1076 aa21.28■■□□□ 1
UBE3C-201ENST00000348165 CHL1O00533 1208 aa21.27■■□□□ 1
UBE3C-201ENST00000348165 FAM114A1Q8IWE2 563 aa21.27■■□□□ 1
UBE3C-201ENST00000348165 METTL22Q9BUU2 404 aaPredicted RBP21.27■■□□□ 1
UBE3C-201ENST00000348165 CAVIN2O95810 425 aa21.27■■□□□ 1
UBE3C-201ENST00000348165 ANKRD2Q9GZV1 360 aa21.27■■□□□ 1
UBE3C-201ENST00000348165 CCDC171Q6TFL3 1326 aa21.27■■□□□ 1
UBE3C-201ENST00000348165 SH3TC1Q8TE82 1336 aa21.27■■□□□ 1
UBE3C-201ENST00000348165 TRIM75PA6NK02 468 aa21.27■■□□□ 1
UBE3C-201ENST00000348165 TMCO5BA8MYB1 307 aa21.27■■□□□ 1
UBE3C-201ENST00000348165 ITGA6P23229 1130 aa21.27■■□□□ 1
UBE3C-201ENST00000348165 ZRSR2Q15696 482 aaKnown RBP21.27■■□□□ 1
UBE3C-201ENST00000348165 PLCD4Q9BRC7 762 aa21.27■■□□□ 1
UBE3C-201ENST00000348165 LRRC27Q9C0I9 530 aa21.27■■□□□ 1
UBE3C-201ENST00000348165 GBP3Q9H0R5 595 aa21.27■■□□□ 1
UBE3C-201ENST00000348165 SNX21Q969T3 373 aa21.27■□□□□ 0.99
UBE3C-201ENST00000348165 TRIM35Q9UPQ4 493 aa21.27■□□□□ 0.99
UBE3C-201ENST00000348165 SEC24BO95487 1268 aa21.26■□□□□ 0.99
UBE3C-201ENST00000348165 NOP2P46087 812 aaKnown RBP21.26■□□□□ 0.99
UBE3C-201ENST00000348165 ZKSCAN3Q9BRR0 538 aa21.26■□□□□ 0.99
UBE3C-201ENST00000348165 MBD4O95243 580 aa21.26■□□□□ 0.99
UBE3C-201ENST00000348165 SMARCC2Q8TAQ2 1214 aa21.26■□□□□ 0.99
UBE3C-201ENST00000348165 ZNF594Q96JF6 807 aaPredicted RBP21.26■□□□□ 0.99
UBE3C-201ENST00000348165 DBNDD2Q9BQY9 259 aa21.26■□□□□ 0.99
UBE3C-201ENST00000348165 DNAI2Q9GZS0 605 aa21.26■□□□□ 0.99
UBE3C-201ENST00000348165 CCNL1Q9UK58 526 aaPredicted RBP21.26■□□□□ 0.99
UBE3C-201ENST00000348165 ANO6Q4KMQ2 910 aa21.26■□□□□ 0.99
UBE3C-201ENST00000348165 PLCG2P16885 1265 aa21.26■□□□□ 0.99
UBE3C-201ENST00000348165 EDC4Q6P2E9 1401 aaKnown RBP21.25■□□□□ 0.99
UBE3C-201ENST00000348165 GSTTP1A0A1W2PQM5 241 aa21.25■□□□□ 0.99
UBE3C-201ENST00000348165 PRIM1P49642 420 aaKnown RBP21.25■□□□□ 0.99
UBE3C-201ENST00000348165 LRSAM1Q6UWE0 723 aa21.25■□□□□ 0.99
UBE3C-201ENST00000348165 CCDC113Q9H0I3 377 aa21.25■□□□□ 0.99
UBE3C-201ENST00000348165 SPTLC2O15270 562 aa21.25■□□□□ 0.99
UBE3C-201ENST00000348165 UBASH3AP57075 661 aa21.25■□□□□ 0.99
UBE3C-201ENST00000348165 ARHGEF12Q9NZN5 1544 aa21.25■□□□□ 0.99
UBE3C-201ENST00000348165 GBP2P32456 591 aaPredicted RBP21.25■□□□□ 0.99
UBE3C-201ENST00000348165 JDP2Q8WYK2 163 aa21.25■□□□□ 0.99
UBE3C-201ENST00000348165 BICD1Q96G01 975 aa21.25■□□□□ 0.99
UBE3C-201ENST00000348165 RMND1Q9NWS8 449 aa21.25■□□□□ 0.99
UBE3C-201ENST00000348165 PTPDC1A2A3K4 754 aa21.25■□□□□ 0.99
UBE3C-201ENST00000348165 TRAF1Q13077 416 aa21.25■□□□□ 0.99
UBE3C-201ENST00000348165 CNBD1Q8NA66 436 aa21.25■□□□□ 0.99
UBE3C-201ENST00000348165 DHX58Q96C10 678 aa21.25■□□□□ 0.99
UBE3C-201ENST00000348165 PUF60Q9UHX1 559 aaKnown RBP21.25■□□□□ 0.99
UBE3C-201ENST00000348165 PPP4R3BQ5MIZ7 849 aa21.24■□□□□ 0.99
UBE3C-201ENST00000348165 CCDC129Q6ZRS4 1044 aa21.24■□□□□ 0.99
UBE3C-201ENST00000348165 TNNI2P48788 182 aa21.24■□□□□ 0.99
UBE3C-201ENST00000348165 COL17A1Q9UMD9 1497 aaPredicted RBP21.24■□□□□ 0.99
UBE3C-201ENST00000348165 AKR1B10O60218 316 aa21.24■□□□□ 0.99
UBE3C-201ENST00000348165 C6orf50Q9HD87 102 aa21.24■□□□□ 0.99
UBE3C-201ENST00000348165 PRPF4BQ13523 1007 aaKnown RBP21.24■□□□□ 0.99
UBE3C-201ENST00000348165 CALM1P0DP23 149 aa21.23■□□□□ 0.99
UBE3C-201ENST00000348165 CALM2P0DP24 149 aa21.23■□□□□ 0.99
UBE3C-201ENST00000348165 CALM3P0DP25 149 aa21.23■□□□□ 0.99
UBE3C-201ENST00000348165 ASIC1P78348 528 aa21.23■□□□□ 0.99
UBE3C-201ENST00000348165 SLC52A2Q9HAB3 445 aa21.23■□□□□ 0.99
UBE3C-201ENST00000348165 CLEC11AQ9Y240 323 aa21.23■□□□□ 0.99
UBE3C-201ENST00000348165 UVSSAQ2YD98 709 aa21.23■□□□□ 0.99
UBE3C-201ENST00000348165 RUFY3Q7L099 469 aa21.23■□□□□ 0.99
UBE3C-201ENST00000348165 DNAJC10Q8IXB1 793 aa21.23■□□□□ 0.99
UBE3C-201ENST00000348165 USP26Q9BXU7 913 aa21.23■□□□□ 0.99
UBE3C-201ENST00000348165 DNAJC25Q9H1X3 360 aa21.23■□□□□ 0.99
UBE3C-201ENST00000348165 CCDC174Q6PII3 467 aa21.23■□□□□ 0.99
UBE3C-201ENST00000348165 USP19O94966 1318 aa21.23■□□□□ 0.99
UBE3C-201ENST00000348165 DISP1Q96F81 1524 aa21.23■□□□□ 0.99
UBE3C-201ENST00000348165 GRM1Q13255 1194 aa21.22■□□□□ 0.99
UBE3C-201ENST00000348165 ZNF496Q96IT1 587 aaPredicted RBP21.22■□□□□ 0.99
UBE3C-201ENST00000348165 ATP10AO60312 1499 aa21.22■□□□□ 0.99
UBE3C-201ENST00000348165 TNNI3KQ59H18 835 aa21.22■□□□□ 0.99
UBE3C-201ENST00000348165 CCDC24Q8N4L8 307 aa21.22■□□□□ 0.99
UBE3C-201ENST00000348165 FPGT-TNNI3KV9GXZ4 949 aa21.22■□□□□ 0.99
UBE3C-201ENST00000348165 SPAG5Q96R06 1193 aa21.22■□□□□ 0.99
UBE3C-201ENST00000348165 EYA3Q99504 573 aa21.22■□□□□ 0.99
UBE3C-201ENST00000348165 CALML3P27482 149 aa21.22■□□□□ 0.99
UBE3C-201ENST00000348165 CLCN1P35523 988 aa21.22■□□□□ 0.99
UBE3C-201ENST00000348165 RRP36Q96EU6 259 aaKnown RBP21.22■□□□□ 0.99
UBE3C-201ENST00000348165 FAM98CQ17RN3 349 aaKnown RBP21.21■□□□□ 0.99
UBE3C-201ENST00000348165 ZSWIM4Q9H7M6 989 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms