RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 MASTLQ96GX5 879 aa17.83■□□□□ 0.44
CXCL12-201ENST00000343575 DNAJC2Q99543 621 aaKnown RBP17.83■□□□□ 0.44
CXCL12-201ENST00000343575 ANKRD2Q9GZV1 360 aa17.83■□□□□ 0.44
CXCL12-201ENST00000343575 ANTXR1Q9H6X2 564 aa17.83■□□□□ 0.44
CXCL12-201ENST00000343575 TXNRD3Q86VQ6 643 aa17.82■□□□□ 0.44
CXCL12-201ENST00000343575 MTFR1LQ9H019 292 aa17.82■□□□□ 0.44
CXCL12-201ENST00000343575 SNRKQ9NRH2 765 aa17.82■□□□□ 0.44
CXCL12-201ENST00000343575 ATF5Q9Y2D1 282 aaPredicted RBP17.82■□□□□ 0.44
CXCL12-201ENST00000343575 LRRC37AA6NMS7 1700 aa17.82■□□□□ 0.44
CXCL12-201ENST00000343575 ZNF804BA4D1E1 1349 aa17.82■□□□□ 0.44
CXCL12-201ENST00000343575 CHGBP05060 677 aa17.82■□□□□ 0.44
CXCL12-201ENST00000343575 MFAP1P55081 439 aaKnown RBP17.82■□□□□ 0.44
CXCL12-201ENST00000343575 GPSM2P81274 684 aa17.82■□□□□ 0.44
CXCL12-201ENST00000343575 C2CD5Q86YS7 1000 aa17.82■□□□□ 0.44
CXCL12-201ENST00000343575 FAM84BQ96KN1 310 aaPredicted RBP17.82■□□□□ 0.44
CXCL12-201ENST00000343575 SGIP1Q9BQI5 828 aa17.82■□□□□ 0.44
CXCL12-201ENST00000343575 LTBP1Q14766 1721 aa17.81■□□□□ 0.44
CXCL12-201ENST00000343575 PSDA5PKW4 1024 aaPredicted RBP17.81■□□□□ 0.44
CXCL12-201ENST00000343575 ZAP70P43403 619 aa17.81■□□□□ 0.44
CXCL12-201ENST00000343575 GYG1P46976 350 aa17.81■□□□□ 0.44
CXCL12-201ENST00000343575 OLFM4Q6UX06 510 aa17.81■□□□□ 0.44
CXCL12-201ENST00000343575 PAG1Q9NWQ8 432 aa17.81■□□□□ 0.44
CXCL12-201ENST00000343575 GOLIM4O00461 696 aa17.8■□□□□ 0.44
CXCL12-201ENST00000343575 SP8Q8IXZ3 490 aa17.8■□□□□ 0.44
CXCL12-201ENST00000343575 ESYT1Q9BSJ8 1104 aa17.8■□□□□ 0.44
CXCL12-201ENST00000343575 ATP6V0A2Q9Y487 856 aa17.8■□□□□ 0.44
CXCL12-201ENST00000343575 XDHP47989 1333 aa17.8■□□□□ 0.44
CXCL12-201ENST00000343575 H0YIN7 160 aa17.8■□□□□ 0.44
CXCL12-201ENST00000343575 PPEF1O14829 653 aaPredicted RBP17.8■□□□□ 0.44
CXCL12-201ENST00000343575 ALDH1B1P30837 517 aa17.8■□□□□ 0.44
CXCL12-201ENST00000343575 RASGRF1Q13972 1273 aa17.8■□□□□ 0.44
CXCL12-201ENST00000343575 STYK1Q6J9G0 422 aa17.8■□□□□ 0.44
CXCL12-201ENST00000343575 FBXO33Q7Z6M2 555 aa17.8■□□□□ 0.44
CXCL12-201ENST00000343575 PODXL2Q9NZ53 605 aa17.8■□□□□ 0.44
CXCL12-201ENST00000343575 HMG20BQ9P0W2 317 aa17.8■□□□□ 0.44
CXCL12-201ENST00000343575 ANKIB1Q9P2G1 1089 aa17.8■□□□□ 0.44
CXCL12-201ENST00000343575 SLX4Q8IY92 1834 aa17.79■□□□□ 0.44
CXCL12-201ENST00000343575 FKBP4Q02790 459 aaKnown RBP eCLIP17.79■□□□□ 0.44
CXCL12-201ENST00000343575 KBTBD3Q8NAB2 608 aa17.79■□□□□ 0.44
CXCL12-201ENST00000343575 KIF13BQ9NQT8 1826 aa17.79■□□□□ 0.44
CXCL12-201ENST00000343575 CYP2E1P05181 493 aaPredicted RBP17.78■□□□□ 0.44
CXCL12-201ENST00000343575 KCNA3P22001 575 aa17.78■□□□□ 0.44
CXCL12-201ENST00000343575 ZNF622Q969S3 477 aaKnown RBP eCLIP17.78■□□□□ 0.44
CXCL12-201ENST00000343575 FSD1Q9BTV5 496 aa17.78■□□□□ 0.44
CXCL12-201ENST00000343575 POLLQ9UGP5 575 aa17.78■□□□□ 0.44
CXCL12-201ENST00000343575 NSFL1CQ9UNZ2 370 aaKnown RBP17.78■□□□□ 0.44
CXCL12-201ENST00000343575 LEMD3Q9Y2U8 911 aa17.78■□□□□ 0.44
CXCL12-201ENST00000343575 UQCRFS1P1P0C7P4 283 aa17.78■□□□□ 0.44
CXCL12-201ENST00000343575 SLFNL1Q499Z3 407 aa17.78■□□□□ 0.44
CXCL12-201ENST00000343575 TMC4Q7Z404 712 aa17.78■□□□□ 0.44
CXCL12-201ENST00000343575 FAM227BQ96M60 508 aa17.78■□□□□ 0.44
CXCL12-201ENST00000343575 GPR101Q96P66 508 aaPredicted RBP17.78■□□□□ 0.44
CXCL12-201ENST00000343575 COL1A1P02452 1464 aaPredicted RBP17.78■□□□□ 0.44
CXCL12-201ENST00000343575 CACNA1SQ13698 1873 aa17.77■□□□□ 0.44
CXCL12-201ENST00000343575 SGSM2O43147 1006 aa17.77■□□□□ 0.43
CXCL12-201ENST00000343575 CASC1Q6TDU7 716 aa17.77■□□□□ 0.43
CXCL12-201ENST00000343575 CWC27Q6UX04 472 aaKnown RBP17.77■□□□□ 0.43
CXCL12-201ENST00000343575 TBC1D32Q96NH3 1257 aa17.77■□□□□ 0.43
CXCL12-201ENST00000343575 MYO5AQ9Y4I1 1855 aaKnown RBP17.77■□□□□ 0.43
CXCL12-201ENST00000343575 DUOX1Q9NRD9 1551 aa17.76■□□□□ 0.43
CXCL12-201ENST00000343575 PTGER2P43116 358 aa17.76■□□□□ 0.43
CXCL12-201ENST00000343575 KCNJ4P48050 445 aa17.76■□□□□ 0.43
CXCL12-201ENST00000343575 NMIQ13287 307 aaPredicted RBP17.76■□□□□ 0.43
CXCL12-201ENST00000343575 PRPF40BQ6NWY9 871 aaKnown RBP17.76■□□□□ 0.43
CXCL12-201ENST00000343575 C15orf52Q6ZUT6 534 aaKnown RBP17.76■□□□□ 0.43
CXCL12-201ENST00000343575 SPATA5Q8NB90 893 aa17.76■□□□□ 0.43
CXCL12-201ENST00000343575 TBC1D16Q8TBP0 767 aa17.76■□□□□ 0.43
CXCL12-201ENST00000343575 C7orf43Q8WVR3 580 aa17.76■□□□□ 0.43
CXCL12-201ENST00000343575 USP26Q9BXU7 913 aa17.76■□□□□ 0.43
CXCL12-201ENST00000343575 PIH1D3Q9NQM4 214 aaKnown RBP17.76■□□□□ 0.43
CXCL12-201ENST00000343575 IQSEC3Q9UPP2 1182 aaPredicted RBP17.76■□□□□ 0.43
CXCL12-201ENST00000343575 KIAA1551Q9HCM1 1747 aa17.76■□□□□ 0.43
CXCL12-201ENST00000343575 DLEC1Q9Y238 1755 aa17.76■□□□□ 0.43
CXCL12-201ENST00000343575 A0A0D9SFI3 127 aa17.75■□□□□ 0.43
CXCL12-201ENST00000343575 RFX7Q2KHR2 1363 aa17.75■□□□□ 0.43
CXCL12-201ENST00000343575 RTN4Q9NQC3 1192 aaKnown RBP17.75■□□□□ 0.43
CXCL12-201ENST00000343575 GOLGB1Q14789 3259 aaKnown RBP17.75■□□□□ 0.43
CXCL12-201ENST00000343575 SNED1Q8TER0 1413 aa17.74■□□□□ 0.43
CXCL12-201ENST00000343575 A0A0G2JLW4 131 aa17.74■□□□□ 0.43
CXCL12-201ENST00000343575 UFL1O94874 794 aa17.74■□□□□ 0.43
CXCL12-201ENST00000343575 DPEP1P16444 411 aa17.74■□□□□ 0.43
CXCL12-201ENST00000343575 ATP2B4P23634 1241 aa17.74■□□□□ 0.43
CXCL12-201ENST00000343575 CAVIN4Q5BKX8 364 aa17.74■□□□□ 0.43
CXCL12-201ENST00000343575 FAM43AQ8N2R8 423 aa17.74■□□□□ 0.43
CXCL12-201ENST00000343575 C22orf23Q9BZE7 217 aa17.74■□□□□ 0.43
CXCL12-201ENST00000343575 DIAPH3Q9NSV4 1193 aa17.74■□□□□ 0.43
CXCL12-201ENST00000343575 GGA1Q9UJY5 639 aa17.74■□□□□ 0.43
CXCL12-201ENST00000343575 HIBADHP31937 336 aaKnown RBP17.73■□□□□ 0.43
CXCL12-201ENST00000343575 CNKSR1Q969H4 720 aa17.73■□□□□ 0.43
CXCL12-201ENST00000343575 SEC62Q99442 399 aaKnown RBP17.73■□□□□ 0.43
CXCL12-201ENST00000343575 ZBTB22O15209 634 aa17.73■□□□□ 0.43
CXCL12-201ENST00000343575 RBM25P49756 843 aaKnown RBP17.73■□□□□ 0.43
CXCL12-201ENST00000343575 BRPF3Q9ULD4 1205 aa17.73■□□□□ 0.43
CXCL12-201ENST00000343575 HIP1O00291 1037 aa17.72■□□□□ 0.43
CXCL12-201ENST00000343575 POLD1P28340 1107 aa17.72■□□□□ 0.43
CXCL12-201ENST00000343575 ZNF589Q86UQ0 364 aaPredicted RBP17.72■□□□□ 0.43
CXCL12-201ENST00000343575 TICAM2Q86XR7 235 aa17.72■□□□□ 0.43
CXCL12-201ENST00000343575 MED23Q9ULK4 1368 aa17.72■□□□□ 0.43
CXCL12-201ENST00000343575 ZMYM1Q5SVZ6 1142 aa17.71■□□□□ 0.43
CXCL12-201ENST00000343575 MPNDQ8N594 471 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms