RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 RPGRQ92834 1020 aaKnown RBP19.82■□□□□ 0.76
SMAD4-201ENST00000342988 VTI1AQ96AJ9 217 aa19.82■□□□□ 0.76
SMAD4-201ENST00000342988 IFIT3O14879 490 aaKnown RBP19.82■□□□□ 0.76
SMAD4-201ENST00000342988 ZBTB24O43167 697 aaPredicted RBP19.82■□□□□ 0.76
SMAD4-201ENST00000342988 GOLGA8QA0A0J9YX86 632 aa19.82■□□□□ 0.76
SMAD4-201ENST00000342988 GOLGA8OA6NCC3 632 aa19.82■□□□□ 0.76
SMAD4-201ENST00000342988 GOLGA8NF8WBI6 632 aa19.82■□□□□ 0.76
SMAD4-201ENST00000342988 KAT14Q9H8E8 782 aa19.82■□□□□ 0.76
SMAD4-201ENST00000342988 FAM204AQ9H8W3 233 aa19.82■□□□□ 0.76
SMAD4-201ENST00000342988 TXNDC9O14530 226 aa19.82■□□□□ 0.76
SMAD4-201ENST00000342988 NEK11Q8NG66 645 aa19.82■□□□□ 0.76
SMAD4-201ENST00000342988 NBPF8Q3BBV2 869 aa19.81■□□□□ 0.76
SMAD4-201ENST00000342988 UBL4BQ8N7F7 174 aa19.81■□□□□ 0.76
SMAD4-201ENST00000342988 PLEKHH2Q8IVE3 1493 aa19.81■□□□□ 0.76
SMAD4-201ENST00000342988 ARMC9Q7Z3E5 817 aa19.81■□□□□ 0.76
SMAD4-201ENST00000342988 RPS6KA2Q15349 733 aa19.81■□□□□ 0.76
SMAD4-201ENST00000342988 NSMCE1Q8WV22 266 aa19.81■□□□□ 0.76
SMAD4-201ENST00000342988 SPECC1L-ADORA2AF8WAN1 911 aa19.81■□□□□ 0.76
SMAD4-201ENST00000342988 HSP90AA5PQ58FG0 334 aa19.81■□□□□ 0.76
SMAD4-201ENST00000342988 CABP5Q9NP86 173 aa19.81■□□□□ 0.76
SMAD4-201ENST00000342988 SMARCA2P51531 1590 aa19.81■□□□□ 0.76
SMAD4-201ENST00000342988 SMIM23A6NLE4 172 aa19.8■□□□□ 0.76
SMAD4-201ENST00000342988 AMOTQ4VCS5 1084 aa19.8■□□□□ 0.76
SMAD4-201ENST00000342988 SPINK5Q9NQ38 1064 aaPredicted RBP19.8■□□□□ 0.76
SMAD4-201ENST00000342988 LIMCH1Q9UPQ0 1083 aa19.8■□□□□ 0.76
SMAD4-201ENST00000342988 SYKP43405 635 aa19.8■□□□□ 0.76
SMAD4-201ENST00000342988 DBN1Q16643 649 aa19.8■□□□□ 0.76
SMAD4-201ENST00000342988 MUM1Q2TAK8 710 aa19.8■□□□□ 0.76
SMAD4-201ENST00000342988 RFX1P22670 979 aa19.8■□□□□ 0.76
SMAD4-201ENST00000342988 HELBQ8NG08 1087 aaPredicted RBP19.8■□□□□ 0.76
SMAD4-201ENST00000342988 EVI5LQ96CN4 794 aa19.8■□□□□ 0.76
SMAD4-201ENST00000342988 LARSQ9P2J5 1176 aaKnown RBP19.8■□□□□ 0.76
SMAD4-201ENST00000342988 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
SMAD4-201ENST00000342988 DIXDC1Q155Q3 683 aa19.79■□□□□ 0.76
SMAD4-201ENST00000342988 AFAP1L1Q8TED9 768 aa19.79■□□□□ 0.76
SMAD4-201ENST00000342988 IFT81Q8WYA0 676 aa19.79■□□□□ 0.76
SMAD4-201ENST00000342988 RPGRIP1Q96KN7 1286 aa19.79■□□□□ 0.76
SMAD4-201ENST00000342988 FRMD4BQ9Y2L6 1034 aa19.79■□□□□ 0.76
SMAD4-201ENST00000342988 LRRC43Q8N309 656 aa19.79■□□□□ 0.76
SMAD4-201ENST00000342988 STX10O60499 249 aa19.79■□□□□ 0.76
SMAD4-201ENST00000342988 TOM1L2Q6ZVM7 507 aa19.79■□□□□ 0.76
SMAD4-201ENST00000342988 KCNG4Q8TDN1 519 aa19.79■□□□□ 0.76
SMAD4-201ENST00000342988 PPME1Q9Y570 386 aa19.79■□□□□ 0.76
SMAD4-201ENST00000342988 PYGLP06737 847 aa19.79■□□□□ 0.76
SMAD4-201ENST00000342988 C6orf50Q9HD87 102 aa19.78■□□□□ 0.76
SMAD4-201ENST00000342988 KIF11P52732 1056 aa19.78■□□□□ 0.76
SMAD4-201ENST00000342988 SUPT6HQ7KZ85 1726 aaKnown RBP19.78■□□□□ 0.76
SMAD4-201ENST00000342988 CCDC42Q96M95 316 aa19.78■□□□□ 0.76
SMAD4-201ENST00000342988 BAG1Q99933 345 aaPredicted RBP19.78■□□□□ 0.76
SMAD4-201ENST00000342988 FAM8A1Q9UBU6 413 aa19.78■□□□□ 0.76
SMAD4-201ENST00000342988 GOLGA4Q13439 2230 aaKnown RBP19.78■□□□□ 0.76
SMAD4-201ENST00000342988 OPHN1O60890 802 aa19.78■□□□□ 0.76
SMAD4-201ENST00000342988 INPP5BP32019 993 aa19.78■□□□□ 0.76
SMAD4-201ENST00000342988 GJC1P36383 396 aa19.78■□□□□ 0.76
SMAD4-201ENST00000342988 EPS15L1Q9UBC2 864 aa19.77■□□□□ 0.76
SMAD4-201ENST00000342988 PHLDB3Q6NSJ2 640 aa19.77■□□□□ 0.76
SMAD4-201ENST00000342988 DPH6Q7L8W6 267 aa19.77■□□□□ 0.76
SMAD4-201ENST00000342988 PDZD8Q8NEN9 1154 aa19.77■□□□□ 0.76
SMAD4-201ENST00000342988 NRBF2Q96F24 287 aa19.77■□□□□ 0.76
SMAD4-201ENST00000342988 ARHGAP4P98171 946 aa19.77■□□□□ 0.76
SMAD4-201ENST00000342988 TUBB2AQ13885 445 aa19.77■□□□□ 0.76
SMAD4-201ENST00000342988 TUBB2BQ9BVA1 445 aa19.77■□□□□ 0.76
SMAD4-201ENST00000342988 ZNF830Q96NB3 372 aaPredicted RBP19.77■□□□□ 0.76
SMAD4-201ENST00000342988 GSTO1P78417 241 aa19.77■□□□□ 0.75
SMAD4-201ENST00000342988 FAF1Q9UNN5 650 aaPredicted RBP19.77■□□□□ 0.75
SMAD4-201ENST00000342988 SCHIP1Q9P0W5 487 aaPredicted RBP19.76■□□□□ 0.75
SMAD4-201ENST00000342988 MRPL46Q9H2W6 279 aaKnown RBP19.76■□□□□ 0.75
SMAD4-201ENST00000342988 POLE3Q9NRF9 147 aa19.76■□□□□ 0.75
SMAD4-201ENST00000342988 DAAM1Q9Y4D1 1078 aa19.76■□□□□ 0.75
SMAD4-201ENST00000342988 TRIM60Q495X7 471 aa19.76■□□□□ 0.75
SMAD4-201ENST00000342988 PAWRQ96IZ0 340 aaKnown RBP19.76■□□□□ 0.75
SMAD4-201ENST00000342988 HMG20BQ9P0W2 317 aa19.76■□□□□ 0.75
SMAD4-201ENST00000342988 RBBP5Q15291 538 aaKnown RBP19.76■□□□□ 0.75
SMAD4-201ENST00000342988 MFSD6Q6ZSS7 791 aa19.76■□□□□ 0.75
SMAD4-201ENST00000342988 ATP6V0A1Q93050 837 aa19.76■□□□□ 0.75
SMAD4-201ENST00000342988 DAPK3O43293 454 aa19.76■□□□□ 0.75
SMAD4-201ENST00000342988 IFIT5Q13325 482 aaKnown RBP19.76■□□□□ 0.75
SMAD4-201ENST00000342988 TMEM67Q5HYA8 995 aa19.76■□□□□ 0.75
SMAD4-201ENST00000342988 RUFY4Q6ZNE9 571 aa19.76■□□□□ 0.75
SMAD4-201ENST00000342988 DHX29Q7Z478 1369 aaKnown RBP19.76■□□□□ 0.75
SMAD4-201ENST00000342988 HNRNPCL2B2RXH8 293 aa19.75■□□□□ 0.75
SMAD4-201ENST00000342988 HNRNPCL1O60812 293 aaKnown RBP19.75■□□□□ 0.75
SMAD4-201ENST00000342988 HS2ST1Q7LGA3 356 aa19.75■□□□□ 0.75
SMAD4-201ENST00000342988 PFDN1O60925 122 aa19.75■□□□□ 0.75
SMAD4-201ENST00000342988 METAP2P50579 478 aaKnown RBP eCLIP19.75■□□□□ 0.75
SMAD4-201ENST00000342988 TERF1P54274 439 aa19.75■□□□□ 0.75
SMAD4-201ENST00000342988 IARSP41252 1262 aaKnown RBP19.74■□□□□ 0.75
SMAD4-201ENST00000342988 SLC12A2P55011 1212 aa19.74■□□□□ 0.75
SMAD4-201ENST00000342988 BIN1O00499 593 aa19.74■□□□□ 0.75
SMAD4-201ENST00000342988 TMOD4Q9NZQ9 345 aa19.74■□□□□ 0.75
SMAD4-201ENST00000342988 BANK1Q8NDB2 785 aa19.74■□□□□ 0.75
SMAD4-201ENST00000342988 MORC4Q8TE76 937 aa19.74■□□□□ 0.75
SMAD4-201ENST00000342988 BACH2Q9BYV9 841 aa19.74■□□□□ 0.75
SMAD4-201ENST00000342988 TEKT2Q9UIF3 430 aa19.74■□□□□ 0.75
SMAD4-201ENST00000342988 PDS5BQ9NTI5 1447 aa19.74■□□□□ 0.75
SMAD4-201ENST00000342988 POTEB3A0JP26 581 aa19.74■□□□□ 0.75
SMAD4-201ENST00000342988 POTEBQ6S5H4 581 aa19.74■□□□□ 0.75
SMAD4-201ENST00000342988 PPP1R21Q6ZMI0 780 aa19.74■□□□□ 0.75
SMAD4-201ENST00000342988 IFT20Q8IY31 132 aa19.74■□□□□ 0.75
SMAD4-201ENST00000342988 TRIM4Q9C037 500 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms